RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TRAV23DV6A0A075B6W5 121 aa12.89□□□□□ -0.35
GTF2F1-204ENST00000594965 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
GTF2F1-204ENST00000594965 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
GTF2F1-204ENST00000594965 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
GTF2F1-204ENST00000594965 LINC00483Q53H64 154 aa12.88□□□□□ -0.35
GTF2F1-204ENST00000594965 SPANXCQ9NY87 97 aa12.88□□□□□ -0.35
GTF2F1-204ENST00000594965 C20orf202A1L168 122 aa12.87□□□□□ -0.35
GTF2F1-204ENST00000594965 ATOH7Q8N100 152 aa12.87□□□□□ -0.35
GTF2F1-204ENST00000594965 RETNLBQ9BQ08 111 aa12.86□□□□□ -0.35
GTF2F1-204ENST00000594965 ZNF73O43830 326 aaPredicted RBP12.85□□□□□ -0.35
GTF2F1-204ENST00000594965 S100A1P23297 94 aa12.85□□□□□ -0.35
GTF2F1-204ENST00000594965 CTAG1AP78358 180 aa12.85□□□□□ -0.35
GTF2F1-204ENST00000594965 GAGE2AQ6NT46 116 aa12.85□□□□□ -0.35
GTF2F1-204ENST00000594965 HIST3H2BBQ8N257 126 aa12.82□□□□□ -0.36
GTF2F1-204ENST00000594965 Q8NBF4 154 aa12.81□□□□□ -0.36
GTF2F1-204ENST00000594965 SPANXDQ9BXN6 97 aa12.81□□□□□ -0.36
GTF2F1-204ENST00000594965 SPAG11AQ6PDA7 123 aa12.8□□□□□ -0.36
GTF2F1-204ENST00000594965 PCP2Q8IVA1 136 aa12.8□□□□□ -0.36
GTF2F1-204ENST00000594965 OR13C6PQ8NH95 151 aa12.8□□□□□ -0.36
GTF2F1-204ENST00000594965 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
GTF2F1-204ENST00000594965 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
GTF2F1-204ENST00000594965 HIST1H2BLQ99880 126 aa12.79□□□□□ -0.36
GTF2F1-204ENST00000594965 CBY1Q9Y3M2 126 aa12.77□□□□□ -0.37
GTF2F1-204ENST00000594965 AKR1D1P51857 326 aa12.76□□□□□ -0.37
GTF2F1-204ENST00000594965 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
GTF2F1-204ENST00000594965 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
GTF2F1-204ENST00000594965 IGLV9-49A0A0B4J1Y8 123 aa12.74□□□□□ -0.37
GTF2F1-204ENST00000594965 S100A2P29034 98 aa12.73□□□□□ -0.37
GTF2F1-204ENST00000594965 HINT1P49773 126 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-204ENST00000594965 MOBPQ13875 183 aa12.73□□□□□ -0.37
GTF2F1-204ENST00000594965 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
GTF2F1-204ENST00000594965 IFITM1P13164 125 aa12.72□□□□□ -0.37
GTF2F1-204ENST00000594965 IGLV7-46A0A075B6I9 117 aa12.71□□□□□ -0.37
GTF2F1-204ENST00000594965 SNRPEP62304 92 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-204ENST00000594965 SSBP3-AS1Q7Z2R9 100 aa12.71□□□□□ -0.37
GTF2F1-204ENST00000594965 MUSTN1Q8IVN3 82 aa12.71□□□□□ -0.37
GTF2F1-204ENST00000594965 Q6ZVH6 145 aa12.7□□□□□ -0.38
GTF2F1-204ENST00000594965 C5orf52A6NGY3 159 aa12.69□□□□□ -0.38
GTF2F1-204ENST00000594965 C6orf99Q4VX62 202 aa12.69□□□□□ -0.38
GTF2F1-204ENST00000594965 SPINK1P00995 79 aa12.68□□□□□ -0.38
GTF2F1-204ENST00000594965 ELOF1P60002 83 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-204ENST00000594965 TPRXLQ17RH7 258 aa12.68□□□□□ -0.38
GTF2F1-204ENST00000594965 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
GTF2F1-204ENST00000594965 S100A6P06703 90 aa12.67□□□□□ -0.38
GTF2F1-204ENST00000594965 COX7BP24311 80 aa12.66□□□□□ -0.38
GTF2F1-204ENST00000594965 DHRS4-AS1Q9P1J3 65 aa12.66□□□□□ -0.38
GTF2F1-204ENST00000594965 SPRR1BP22528 89 aa12.65□□□□□ -0.38
GTF2F1-204ENST00000594965 C9orf153Q5TBE3 101 aa12.63□□□□□ -0.39
GTF2F1-204ENST00000594965 FP248Q71RG6 208 aaPredicted RBP12.62□□□□□ -0.39
GTF2F1-204ENST00000594965 TRBV7-6A0A0J9YX20 115 aa12.61□□□□□ -0.39
GTF2F1-204ENST00000594965 A6NDN8 102 aa12.61□□□□□ -0.39
GTF2F1-204ENST00000594965 RPS29P62273 56 aaKnown RBP12.61□□□□□ -0.39
GTF2F1-204ENST00000594965 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
GTF2F1-204ENST00000594965 Q8N377 158 aa12.6□□□□□ -0.39
GTF2F1-204ENST00000594965 CDIP1Q9H305 208 aa12.6□□□□□ -0.39
GTF2F1-204ENST00000594965 MUC17Q685J3 4493 aa12.59□□□□□ -0.39
GTF2F1-204ENST00000594965 A0A1B0GWB2 263 aa12.56□□□□□ -0.4
GTF2F1-204ENST00000594965 TRAV13-2A0A0B4J235 113 aa12.55□□□□□ -0.4
GTF2F1-204ENST00000594965 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
GTF2F1-204ENST00000594965 SMIM11BQ8TCY0 68 aa12.55□□□□□ -0.4
GTF2F1-204ENST00000594965 MUC2Q02817 5179 aa12.55□□□□□ -0.4
GTF2F1-204ENST00000594965 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
GTF2F1-204ENST00000594965 KRTAP13-3Q3SY46 172 aa12.53□□□□□ -0.4
GTF2F1-204ENST00000594965 LAMTOR3Q9UHA4 124 aa12.53□□□□□ -0.4
GTF2F1-204ENST00000594965 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-204ENST00000594965 TAL2Q16559 108 aa12.52□□□□□ -0.41
GTF2F1-204ENST00000594965 DEFB105AQ8NG35 78 aa12.52□□□□□ -0.41
GTF2F1-204ENST00000594965 A4D1N5 150 aa12.51□□□□□ -0.41
GTF2F1-204ENST00000594965 SLC25A20O43772 301 aa12.51□□□□□ -0.41
GTF2F1-204ENST00000594965 TEX49A0A1B0GTD5 131 aa12.5□□□□□ -0.41
GTF2F1-204ENST00000594965 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
GTF2F1-204ENST00000594965 IGLV5-48A0A075B6I7 105 aa12.49□□□□□ -0.41
GTF2F1-204ENST00000594965 Q1RN00 199 aa12.49□□□□□ -0.41
GTF2F1-204ENST00000594965 COX8AP10176 69 aa12.47□□□□□ -0.41
GTF2F1-204ENST00000594965 HRCT1Q6UXD1 115 aa12.45□□□□□ -0.42
GTF2F1-204ENST00000594965 DLEU1O43261 78 aa12.43□□□□□ -0.42
GTF2F1-204ENST00000594965 NHP2Q9NX24 153 aaKnown RBP12.42□□□□□ -0.42
GTF2F1-204ENST00000594965 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
GTF2F1-204ENST00000594965 LINC00575Q6W349 94 aa12.4□□□□□ -0.42
GTF2F1-204ENST00000594965 C12orf57Q99622 126 aa12.4□□□□□ -0.42
GTF2F1-204ENST00000594965 PRO1933Q9H354 126 aa12.4□□□□□ -0.42
GTF2F1-204ENST00000594965 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
GTF2F1-204ENST00000594965 CD164Q04900 197 aa12.38□□□□□ -0.43
GTF2F1-204ENST00000594965 VAMP3Q15836 100 aa12.38□□□□□ -0.43
GTF2F1-204ENST00000594965 LIMD2Q9BT23 127 aa12.38□□□□□ -0.43
GTF2F1-204ENST00000594965 A0A0G2JQZ4 141 aa12.37□□□□□ -0.43
GTF2F1-204ENST00000594965 PAM16Q9Y3D7 125 aa12.37□□□□□ -0.43
GTF2F1-204ENST00000594965 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
GTF2F1-204ENST00000594965 ASB16-AS1Q495Z4 193 aa12.34□□□□□ -0.43
GTF2F1-204ENST00000594965 A0A0U1RQV1 116 aa12.33□□□□□ -0.44
GTF2F1-204ENST00000594965 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
GTF2F1-204ENST00000594965 hADV29S1A0JD25 119 aa12.32□□□□□ -0.44
GTF2F1-204ENST00000594965 H7C2G1 150 aa12.32□□□□□ -0.44
GTF2F1-204ENST00000594965 Q6ZQY7 126 aa12.32□□□□□ -0.44
GTF2F1-204ENST00000594965 C2orf91Q6ZV80 131 aa12.32□□□□□ -0.44
GTF2F1-204ENST00000594965 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
GTF2F1-204ENST00000594965 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
GTF2F1-204ENST00000594965 CFC1P0CG37 223 aa12.3□□□□□ -0.44
GTF2F1-204ENST00000594965 Q5XG85 94 aa12.3□□□□□ -0.44
GTF2F1-204ENST00000594965 XP32Q5T750 250 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms