RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 K7ERJ3 54 aa6.72□□□□□ -1.33
USE1-204ENST00000594399 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
USE1-204ENST00000594399 BATFQ16520 125 aa6.72□□□□□ -1.33
USE1-204ENST00000594399 REG3GQ6UW15 175 aa6.72□□□□□ -1.33
USE1-204ENST00000594399 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
USE1-204ENST00000594399 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
USE1-204ENST00000594399 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.34
USE1-204ENST00000594399 H7C2G1 150 aa6.7□□□□□ -1.34
USE1-204ENST00000594399 ZNF73O43830 326 aaPredicted RBP6.7□□□□□ -1.34
USE1-204ENST00000594399 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
USE1-204ENST00000594399 DIRC1Q969H9 104 aa6.7□□□□□ -1.34
USE1-204ENST00000594399 BCE1O60756 84 aa6.69□□□□□ -1.34
USE1-204ENST00000594399 SPRR1AP35321 89 aa6.69□□□□□ -1.34
USE1-204ENST00000594399 Q1RN00 199 aa6.69□□□□□ -1.34
USE1-204ENST00000594399 SMIM11BQ8TCY0 68 aa6.69□□□□□ -1.34
USE1-204ENST00000594399 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
USE1-204ENST00000594399 ETDCA0A1B0GVM5 59 aa6.68□□□□□ -1.34
USE1-204ENST00000594399 FAM229AH3BQW9 127 aa6.68□□□□□ -1.34
USE1-204ENST00000594399 RPL28P46779 137 aaKnown RBP6.68□□□□□ -1.34
USE1-204ENST00000594399 C6orf99Q4VX62 202 aa6.68□□□□□ -1.34
USE1-204ENST00000594399 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
USE1-204ENST00000594399 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
USE1-204ENST00000594399 UBE2AP49459 152 aa6.67□□□□□ -1.34
USE1-204ENST00000594399 Q5VSD8 79 aa6.67□□□□□ -1.34
USE1-204ENST00000594399 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
USE1-204ENST00000594399 TSPAN13O95857 204 aa6.66□□□□□ -1.34
USE1-204ENST00000594399 IGLV7-43P04211 117 aa6.66□□□□□ -1.34
USE1-204ENST00000594399 SNHG12Q9BXW3 62 aa6.66□□□□□ -1.34
USE1-204ENST00000594399 FAT1Q14517 4588 aa6.66□□□□□ -1.34
USE1-204ENST00000594399 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
USE1-204ENST00000594399 B5MCH6 92 aa6.65□□□□□ -1.34
USE1-204ENST00000594399 COX7BP24311 80 aa6.65□□□□□ -1.34
USE1-204ENST00000594399 ELOF1P60002 83 aaKnown RBP6.65□□□□□ -1.34
USE1-204ENST00000594399 PRLHP81277 87 aa6.65□□□□□ -1.34
USE1-204ENST00000594399 H0Y9J4 135 aa6.64□□□□□ -1.35
USE1-204ENST00000594399 PSMB2P49721 201 aa6.64□□□□□ -1.35
USE1-204ENST00000594399 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
USE1-204ENST00000594399 Q6ZRX8 168 aa6.64□□□□□ -1.35
USE1-204ENST00000594399 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
USE1-204ENST00000594399 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
USE1-204ENST00000594399 TRIAP1O43715 76 aa6.63□□□□□ -1.35
USE1-204ENST00000594399 ZNF861PO60384 105 aa6.63□□□□□ -1.35
USE1-204ENST00000594399 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
USE1-204ENST00000594399 VAMP3Q15836 100 aa6.63□□□□□ -1.35
USE1-204ENST00000594399 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
USE1-204ENST00000594399 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
USE1-204ENST00000594399 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
USE1-204ENST00000594399 COL5A1-AS1Q5SY13 56 aa6.61□□□□□ -1.35
USE1-204ENST00000594399 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
USE1-204ENST00000594399 H0YGX0 51 aa6.6□□□□□ -1.35
USE1-204ENST00000594399 COX6CP09669 75 aa6.6□□□□□ -1.35
USE1-204ENST00000594399 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
USE1-204ENST00000594399 Q9BRP9 147 aa6.6□□□□□ -1.35
USE1-204ENST00000594399 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
USE1-204ENST00000594399 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
USE1-204ENST00000594399 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
USE1-204ENST00000594399 NAA38Q9BRA0 125 aaKnown RBP6.59□□□□□ -1.35
USE1-204ENST00000594399 SLC25A20O43772 301 aa6.58□□□□□ -1.36
USE1-204ENST00000594399 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
USE1-204ENST00000594399 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
USE1-204ENST00000594399 H3BUT2 72 aa6.57□□□□□ -1.36
USE1-204ENST00000594399 SCGB1C2P0DMR2 95 aa6.57□□□□□ -1.36
USE1-204ENST00000594399 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
USE1-204ENST00000594399 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
USE1-204ENST00000594399 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
USE1-204ENST00000594399 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
USE1-204ENST00000594399 FAM218AQ96MZ4 157 aa6.56□□□□□ -1.36
USE1-204ENST00000594399 A0A1B0GX51 115 aa6.55□□□□□ -1.36
USE1-204ENST00000594399 SNCGO76070 127 aa6.55□□□□□ -1.36
USE1-204ENST00000594399 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
USE1-204ENST00000594399 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
USE1-204ENST00000594399 LST1O00453 97 aa6.53□□□□□ -1.36
USE1-204ENST00000594399 FABP2P12104 132 aa6.53□□□□□ -1.36
USE1-204ENST00000594399 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
USE1-204ENST00000594399 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
USE1-204ENST00000594399 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
USE1-204ENST00000594399 DNAL4O96015 105 aa6.52□□□□□ -1.37
USE1-204ENST00000594399 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
USE1-204ENST00000594399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
USE1-204ENST00000594399 Q6ZQY7 126 aa6.52□□□□□ -1.37
USE1-204ENST00000594399 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
USE1-204ENST00000594399 TCL1BO95988 128 aa6.51□□□□□ -1.37
USE1-204ENST00000594399 TRACP01848 142 aa6.51□□□□□ -1.37
USE1-204ENST00000594399 IGLV5-48A0A075B6I7 105 aa6.5□□□□□ -1.37
USE1-204ENST00000594399 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
USE1-204ENST00000594399 HERC1Q15751 4861 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 J3QL48 77 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 OCIAD2Q56VL3 154 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
USE1-204ENST00000594399 TEX49A0A1B0GTD5 131 aa6.48□□□□□ -1.37
USE1-204ENST00000594399 GHRHP01286 108 aa6.48□□□□□ -1.37
USE1-204ENST00000594399 SPRR1BP22528 89 aa6.48□□□□□ -1.37
USE1-204ENST00000594399 LINC01547P58512 204 aaPredicted RBP6.48□□□□□ -1.37
USE1-204ENST00000594399 SPCS1Q9Y6A9 102 aa6.48□□□□□ -1.37
USE1-204ENST00000594399 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
USE1-204ENST00000594399 FAM229BQ4G0N7 80 aa6.47□□□□□ -1.37
USE1-204ENST00000594399 PPDPFLQ8WWR9 84 aa6.47□□□□□ -1.37
USE1-204ENST00000594399 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms