RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
VMP1-217ENST00000593168 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
VMP1-217ENST00000593168 EPM2AB3EWF7 344 aa8.52□□□□□ -1.05
VMP1-217ENST00000593168 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
VMP1-217ENST00000593168 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
VMP1-217ENST00000593168 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
VMP1-217ENST00000593168 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
VMP1-217ENST00000593168 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.05
VMP1-217ENST00000593168 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
VMP1-217ENST00000593168 K7EP34 96 aa8.51□□□□□ -1.05
VMP1-217ENST00000593168 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
VMP1-217ENST00000593168 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
VMP1-217ENST00000593168 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
VMP1-217ENST00000593168 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
VMP1-217ENST00000593168 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
VMP1-217ENST00000593168 H0YGX0 51 aa8.5□□□□□ -1.05
VMP1-217ENST00000593168 PANO1I0J062 215 aa8.5□□□□□ -1.05
VMP1-217ENST00000593168 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
VMP1-217ENST00000593168 KCNQ1DNQ9H478 68 aa8.5□□□□□ -1.05
VMP1-217ENST00000593168 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
VMP1-217ENST00000593168 M0QXV9 152 aa8.49□□□□□ -1.05
VMP1-217ENST00000593168 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
VMP1-217ENST00000593168 TCL1BO95988 128 aa8.48□□□□□ -1.05
VMP1-217ENST00000593168 UBE2V1Q13404 147 aa8.48□□□□□ -1.05
VMP1-217ENST00000593168 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
VMP1-217ENST00000593168 TRBV7-6A0A0J9YX20 115 aa8.47□□□□□ -1.05
VMP1-217ENST00000593168 LCE2BO14633 110 aa8.47□□□□□ -1.05
VMP1-217ENST00000593168 ZNF73O43830 326 aaPredicted RBP8.47□□□□□ -1.05
VMP1-217ENST00000593168 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
VMP1-217ENST00000593168 A0A087WYN8 130 aa8.46□□□□□ -1.06
VMP1-217ENST00000593168 PRYO14603 147 aa8.46□□□□□ -1.06
VMP1-217ENST00000593168 XGP55808 180 aa8.46□□□□□ -1.06
VMP1-217ENST00000593168 ATXN8Q156A1 80 aa8.46□□□□□ -1.06
VMP1-217ENST00000593168 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 LST1O00453 97 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 SPRR1AP35321 89 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 Q5VSD8 79 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 CLEC2BQ92478 149 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
VMP1-217ENST00000593168 H3BMG7 143 aa8.44□□□□□ -1.06
VMP1-217ENST00000593168 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
VMP1-217ENST00000593168 A0A1B0GX51 115 aa8.43□□□□□ -1.06
VMP1-217ENST00000593168 TRACP01848 142 aa8.43□□□□□ -1.06
VMP1-217ENST00000593168 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
VMP1-217ENST00000593168 COX7BP24311 80 aa8.42□□□□□ -1.06
VMP1-217ENST00000593168 Q6ZSA8 131 aa8.42□□□□□ -1.06
VMP1-217ENST00000593168 FAM218AQ96MZ4 157 aa8.42□□□□□ -1.06
VMP1-217ENST00000593168 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
VMP1-217ENST00000593168 KRTAP4-16G5E9R7 235 aaPredicted RBP8.41□□□□□ -1.06
VMP1-217ENST00000593168 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
VMP1-217ENST00000593168 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
VMP1-217ENST00000593168 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.06
VMP1-217ENST00000593168 SNCGO76070 127 aa8.4□□□□□ -1.06
VMP1-217ENST00000593168 UBE2BP63146 152 aa8.4□□□□□ -1.06
VMP1-217ENST00000593168 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
VMP1-217ENST00000593168 FAM30AQ9NZY2 134 aa8.4□□□□□ -1.06
VMP1-217ENST00000593168 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
VMP1-217ENST00000593168 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
VMP1-217ENST00000593168 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
VMP1-217ENST00000593168 B5MCH6 92 aa8.38□□□□□ -1.07
VMP1-217ENST00000593168 F8W1H4 67 aa8.38□□□□□ -1.07
VMP1-217ENST00000593168 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
VMP1-217ENST00000593168 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
VMP1-217ENST00000593168 SLC25A20O43772 301 aa8.37□□□□□ -1.07
VMP1-217ENST00000593168 Q6ZRX8 168 aa8.37□□□□□ -1.07
VMP1-217ENST00000593168 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
VMP1-217ENST00000593168 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
VMP1-217ENST00000593168 C9JAW5 83 aa8.36□□□□□ -1.07
VMP1-217ENST00000593168 J3QL48 77 aa8.36□□□□□ -1.07
VMP1-217ENST00000593168 DNAL4O96015 105 aa8.36□□□□□ -1.07
VMP1-217ENST00000593168 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
VMP1-217ENST00000593168 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
VMP1-217ENST00000593168 HAMPP81172 84 aa8.35□□□□□ -1.07
VMP1-217ENST00000593168 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
VMP1-217ENST00000593168 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
VMP1-217ENST00000593168 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
VMP1-217ENST00000593168 H0Y9J4 135 aa8.33□□□□□ -1.08
VMP1-217ENST00000593168 H3BT86 120 aa8.33□□□□□ -1.08
VMP1-217ENST00000593168 BCE1O60756 84 aa8.33□□□□□ -1.08
VMP1-217ENST00000593168 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
VMP1-217ENST00000593168 FAM19A1Q7Z5A9 133 aa8.33□□□□□ -1.08
VMP1-217ENST00000593168 MTURNQ8N3F0 131 aa8.33□□□□□ -1.08
VMP1-217ENST00000593168 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.32□□□□□ -1.08
VMP1-217ENST00000593168 ANKRD29Q8N6D5 301 aa8.32□□□□□ -1.08
VMP1-217ENST00000593168 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
VMP1-217ENST00000593168 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
VMP1-217ENST00000593168 Q9BRP9 147 aa8.31□□□□□ -1.08
VMP1-217ENST00000593168 ORMDL1Q9P0S3 153 aa8.31□□□□□ -1.08
VMP1-217ENST00000593168 H3BQ85 93 aa8.3□□□□□ -1.08
VMP1-217ENST00000593168 GHRHP01286 108 aa8.3□□□□□ -1.08
VMP1-217ENST00000593168 OCIAD2Q56VL3 154 aa8.3□□□□□ -1.08
VMP1-217ENST00000593168 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
VMP1-217ENST00000593168 PRLHP81277 87 aa8.29□□□□□ -1.08
VMP1-217ENST00000593168 Q6ZQY7 126 aa8.29□□□□□ -1.08
VMP1-217ENST00000593168 TMEM256-PLSCR3K7ERE1 68 aa8.28□□□□□ -1.08
VMP1-217ENST00000593168 UBE2AP49459 152 aa8.28□□□□□ -1.08
VMP1-217ENST00000593168 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
VMP1-217ENST00000593168 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
VMP1-217ENST00000593168 ERC2-IT1O76042 136 aa8.26□□□□□ -1.09
VMP1-217ENST00000593168 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms