RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 H7C2G1 150 aa13.26□□□□□ -0.29
R3HDM4-204ENST00000589428 PHF5AQ7RTV0 110 aaKnown RBP13.26□□□□□ -0.29
R3HDM4-204ENST00000589428 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
R3HDM4-204ENST00000589428 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
R3HDM4-204ENST00000589428 RPL37AP8A6NKH3 93 aa13.23□□□□□ -0.29
R3HDM4-204ENST00000589428 TSPAN13O95857 204 aa13.23□□□□□ -0.29
R3HDM4-204ENST00000589428 TAX1BP3O14907 124 aa13.22□□□□□ -0.29
R3HDM4-204ENST00000589428 IGLV1-50A0A075B6I6 118 aa13.22□□□□□ -0.29
R3HDM4-204ENST00000589428 ABCA13Q86UQ4 5058 aa13.21□□□□□ -0.29
R3HDM4-204ENST00000589428 Q1RN00 199 aa13.21□□□□□ -0.3
R3HDM4-204ENST00000589428 SRRM2Q9UQ35 2752 aaKnown RBP13.21□□□□□ -0.3
R3HDM4-204ENST00000589428 SMIM11BQ8TCY0 68 aa13.2□□□□□ -0.3
R3HDM4-204ENST00000589428 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
R3HDM4-204ENST00000589428 KRTAP10-4P60372 401 aaPredicted RBP13.19□□□□□ -0.3
R3HDM4-204ENST00000589428 KRTAP11-1Q8IUC1 163 aa13.19□□□□□ -0.3
R3HDM4-204ENST00000589428 TRAV23DV6A0A075B6W5 121 aa13.19□□□□□ -0.3
R3HDM4-204ENST00000589428 NAA38Q9BRA0 125 aaKnown RBP13.19□□□□□ -0.3
R3HDM4-204ENST00000589428 KCNQ1DNQ9H478 68 aa13.18□□□□□ -0.3
R3HDM4-204ENST00000589428 UBE2BP63146 152 aa13.17□□□□□ -0.3
R3HDM4-204ENST00000589428 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
R3HDM4-204ENST00000589428 C9orf118A6NHY6 69 aa13.14□□□□□ -0.31
R3HDM4-204ENST00000589428 PRYO14603 147 aa13.14□□□□□ -0.31
R3HDM4-204ENST00000589428 TRIAP1O43715 76 aa13.14□□□□□ -0.31
R3HDM4-204ENST00000589428 ZNF73O43830 326 aaPredicted RBP13.13□□□□□ -0.31
R3HDM4-204ENST00000589428 H3BUT2 72 aa13.13□□□□□ -0.31
R3HDM4-204ENST00000589428 C6orf99Q4VX62 202 aa13.13□□□□□ -0.31
R3HDM4-204ENST00000589428 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
R3HDM4-204ENST00000589428 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
R3HDM4-204ENST00000589428 PSMB2P49721 201 aa13.12□□□□□ -0.31
R3HDM4-204ENST00000589428 SPRR1AP35321 89 aa13.1□□□□□ -0.31
R3HDM4-204ENST00000589428 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
R3HDM4-204ENST00000589428 DIRC1Q969H9 104 aa13.1□□□□□ -0.31
R3HDM4-204ENST00000589428 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
R3HDM4-204ENST00000589428 PCLOQ9Y6V0 5065 aa13.09□□□□□ -0.31
R3HDM4-204ENST00000589428 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.32
R3HDM4-204ENST00000589428 A0A1W2PPM0 123 aa13.06□□□□□ -0.32
R3HDM4-204ENST00000589428 PKHD1L1Q86WI1 4243 aa13.05□□□□□ -0.32
R3HDM4-204ENST00000589428 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
R3HDM4-204ENST00000589428 COX6CP09669 75 aa13.04□□□□□ -0.32
R3HDM4-204ENST00000589428 ELOF1P60002 83 aaKnown RBP13.04□□□□□ -0.32
R3HDM4-204ENST00000589428 ETDCA0A1B0GVM5 59 aa13.03□□□□□ -0.32
R3HDM4-204ENST00000589428 SCGB1C2P0DMR2 95 aa13.03□□□□□ -0.32
R3HDM4-204ENST00000589428 FLG2Q5D862 2391 aaPredicted RBP13.03□□□□□ -0.32
R3HDM4-204ENST00000589428 COX7BP24311 80 aa13.02□□□□□ -0.32
R3HDM4-204ENST00000589428 VAMP3Q15836 100 aa13.02□□□□□ -0.32
R3HDM4-204ENST00000589428 B5MCH6 92 aa13.02□□□□□ -0.33
R3HDM4-204ENST00000589428 BCE1O60756 84 aa13.02□□□□□ -0.33
R3HDM4-204ENST00000589428 CLEC2BQ92478 149 aa13.02□□□□□ -0.33
R3HDM4-204ENST00000589428 FABP2P12104 132 aa13.01□□□□□ -0.33
R3HDM4-204ENST00000589428 Q6ZRX8 168 aa13.01□□□□□ -0.33
R3HDM4-204ENST00000589428 H0YGX0 51 aa13□□□□□ -0.33
R3HDM4-204ENST00000589428 IGLV7-43P04211 117 aa13□□□□□ -0.33
R3HDM4-204ENST00000589428 FAM19A1Q7Z5A9 133 aa13□□□□□ -0.33
R3HDM4-204ENST00000589428 FAM218AQ96MZ4 157 aa13□□□□□ -0.33
R3HDM4-204ENST00000589428 MYCBP2O75592 4640 aa13□□□□□ -0.33
R3HDM4-204ENST00000589428 LYRM7Q5U5X0 104 aa12.99□□□□□ -0.33
R3HDM4-204ENST00000589428 PRLHP81277 87 aa12.99□□□□□ -0.33
R3HDM4-204ENST00000589428 SPINK6Q6UWN8 80 aa12.99□□□□□ -0.33
R3HDM4-204ENST00000589428 TCL1BO95988 128 aa12.97□□□□□ -0.33
R3HDM4-204ENST00000589428 Q9BRP9 147 aa12.96□□□□□ -0.33
R3HDM4-204ENST00000589428 LINC00575Q6W349 94 aa12.96□□□□□ -0.34
R3HDM4-204ENST00000589428 KRTAP13-1Q8IUC0 172 aa12.96□□□□□ -0.34
R3HDM4-204ENST00000589428 H0Y9J4 135 aa12.94□□□□□ -0.34
R3HDM4-204ENST00000589428 LST1O00453 97 aa12.94□□□□□ -0.34
R3HDM4-204ENST00000589428 UBE2AP49459 152 aa12.94□□□□□ -0.34
R3HDM4-204ENST00000589428 SPCS1Q9Y6A9 102 aa12.94□□□□□ -0.34
R3HDM4-204ENST00000589428 UBE2V1Q13404 147 aa12.93□□□□□ -0.34
R3HDM4-204ENST00000589428 TRBV20-1A0A075B6N2 111 aa12.92□□□□□ -0.34
R3HDM4-204ENST00000589428 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
R3HDM4-204ENST00000589428 ATXN8Q156A1 80 aa12.91□□□□□ -0.34
R3HDM4-204ENST00000589428 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
R3HDM4-204ENST00000589428 K7EP34 96 aa12.9□□□□□ -0.34
R3HDM4-204ENST00000589428 ZNF861PO60384 105 aa12.9□□□□□ -0.34
R3HDM4-204ENST00000589428 OXTP01178 125 aa12.9□□□□□ -0.34
R3HDM4-204ENST00000589428 FAT3Q8TDW7 4589 aa12.89□□□□□ -0.35
R3HDM4-204ENST00000589428 hADV29S1A0JD25 119 aa12.89□□□□□ -0.35
R3HDM4-204ENST00000589428 SLC25A20O43772 301 aa12.89□□□□□ -0.35
R3HDM4-204ENST00000589428 HIGD2AQ9BW72 106 aa12.89□□□□□ -0.35
R3HDM4-204ENST00000589428 LRP1Q07954 4544 aaKnown RBP12.88□□□□□ -0.35
R3HDM4-204ENST00000589428 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
R3HDM4-204ENST00000589428 ERC2-IT1O76042 136 aa12.88□□□□□ -0.35
R3HDM4-204ENST00000589428 A0A1B0GX51 115 aa12.88□□□□□ -0.35
R3HDM4-204ENST00000589428 TRACP01848 142 aa12.88□□□□□ -0.35
R3HDM4-204ENST00000589428 H3BMG7 143 aa12.86□□□□□ -0.35
R3HDM4-204ENST00000589428 J3QL48 77 aa12.86□□□□□ -0.35
R3HDM4-204ENST00000589428 GTF2H5Q6ZYL4 71 aa12.85□□□□□ -0.35
R3HDM4-204ENST00000589428 Q6ZQY7 126 aa12.84□□□□□ -0.35
R3HDM4-204ENST00000589428 SNCGO76070 127 aa12.83□□□□□ -0.36
R3HDM4-204ENST00000589428 DNAL4O96015 105 aa12.83□□□□□ -0.36
R3HDM4-204ENST00000589428 DMBT1Q9UGM3 2413 aaPredicted RBP12.81□□□□□ -0.36
R3HDM4-204ENST00000589428 ST20-AS1Q8NBB2 130 aa12.81□□□□□ -0.36
R3HDM4-204ENST00000589428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.8□□□□□ -0.36
R3HDM4-204ENST00000589428 C9JAW5 83 aa12.79□□□□□ -0.36
R3HDM4-204ENST00000589428 MTURNQ8N3F0 131 aa12.79□□□□□ -0.36
R3HDM4-204ENST00000589428 LINC01600Q96MT4 127 aa12.78□□□□□ -0.36
R3HDM4-204ENST00000589428 LINC01547P58512 204 aaPredicted RBP12.76□□□□□ -0.37
R3HDM4-204ENST00000589428 ORMDL1Q9P0S3 153 aa12.76□□□□□ -0.37
R3HDM4-204ENST00000589428 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
R3HDM4-204ENST00000589428 DEFB105AQ8NG35 78 aa12.74□□□□□ -0.37
R3HDM4-204ENST00000589428 PRO0461Q9UI25 63 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms