RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 KRTAP11-1Q8IUC1 163 aa9.06□□□□□ -0.96
NPC1-207ENST00000588867 VPS25Q9BRG1 176 aa9.06□□□□□ -0.96
NPC1-207ENST00000588867 ZNF73O43830 326 aaPredicted RBP9.05□□□□□ -0.96
NPC1-207ENST00000588867 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
NPC1-207ENST00000588867 TRIAP1O43715 76 aa9.05□□□□□ -0.96
NPC1-207ENST00000588867 SCGB1C2P0DMR2 95 aa9.05□□□□□ -0.96
NPC1-207ENST00000588867 PRYO14603 147 aa9.04□□□□□ -0.96
NPC1-207ENST00000588867 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
NPC1-207ENST00000588867 REG3GQ6UW15 175 aa9.04□□□□□ -0.96
NPC1-207ENST00000588867 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
NPC1-207ENST00000588867 COX6CP09669 75 aa9.03□□□□□ -0.96
NPC1-207ENST00000588867 K7ERU9 68 aa9.02□□□□□ -0.97
NPC1-207ENST00000588867 XGP55808 180 aa9.02□□□□□ -0.97
NPC1-207ENST00000588867 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
NPC1-207ENST00000588867 A0A1W2PPM0 123 aa9□□□□□ -0.97
NPC1-207ENST00000588867 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
NPC1-207ENST00000588867 FABP2P12104 132 aa8.99□□□□□ -0.97
NPC1-207ENST00000588867 COX7BP24311 80 aa8.99□□□□□ -0.97
NPC1-207ENST00000588867 SPRR1AP35321 89 aa8.99□□□□□ -0.97
NPC1-207ENST00000588867 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
NPC1-207ENST00000588867 DNAH8Q96JB1 4490 aa8.99□□□□□ -0.97
NPC1-207ENST00000588867 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
NPC1-207ENST00000588867 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
NPC1-207ENST00000588867 H0YGX0 51 aa8.98□□□□□ -0.97
NPC1-207ENST00000588867 LRP1BQ9NZR2 4599 aa8.98□□□□□ -0.97
NPC1-207ENST00000588867 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
NPC1-207ENST00000588867 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
NPC1-207ENST00000588867 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
NPC1-207ENST00000588867 TRBV7-6A0A0J9YX20 115 aa8.97□□□□□ -0.97
NPC1-207ENST00000588867 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
NPC1-207ENST00000588867 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
NPC1-207ENST00000588867 B5MCH6 92 aa8.96□□□□□ -0.98
NPC1-207ENST00000588867 BCE1O60756 84 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 PRLHP81277 87 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 FAM218AQ96MZ4 157 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 TCL1BO95988 128 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 UBE2AP49459 152 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 Q6ZRX8 168 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
NPC1-207ENST00000588867 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
NPC1-207ENST00000588867 LINC00575Q6W349 94 aa8.93□□□□□ -0.98
NPC1-207ENST00000588867 GTF2H5Q6ZYL4 71 aa8.93□□□□□ -0.98
NPC1-207ENST00000588867 SLC25A20O43772 301 aa8.93□□□□□ -0.98
NPC1-207ENST00000588867 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
NPC1-207ENST00000588867 ATXN8Q156A1 80 aa8.92□□□□□ -0.98
NPC1-207ENST00000588867 hADV29S1A0JD25 119 aa8.91□□□□□ -0.98
NPC1-207ENST00000588867 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
NPC1-207ENST00000588867 SNCGO76070 127 aa8.91□□□□□ -0.98
NPC1-207ENST00000588867 Q9BRP9 147 aa8.91□□□□□ -0.98
NPC1-207ENST00000588867 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
NPC1-207ENST00000588867 LST1O00453 97 aa8.9□□□□□ -0.98
NPC1-207ENST00000588867 DHRS4-AS1Q9P1J3 65 aa8.9□□□□□ -0.99
NPC1-207ENST00000588867 H0Y9J4 135 aa8.89□□□□□ -0.99
NPC1-207ENST00000588867 H3BMG7 143 aa8.89□□□□□ -0.99
NPC1-207ENST00000588867 K7EP34 96 aa8.89□□□□□ -0.99
NPC1-207ENST00000588867 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
NPC1-207ENST00000588867 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
NPC1-207ENST00000588867 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
NPC1-207ENST00000588867 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
NPC1-207ENST00000588867 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
NPC1-207ENST00000588867 DNAL4O96015 105 aa8.88□□□□□ -0.99
NPC1-207ENST00000588867 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
NPC1-207ENST00000588867 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
NPC1-207ENST00000588867 A0A1B0GX51 115 aa8.87□□□□□ -0.99
NPC1-207ENST00000588867 ZNF861PO60384 105 aa8.87□□□□□ -0.99
NPC1-207ENST00000588867 TRACP01848 142 aa8.87□□□□□ -0.99
NPC1-207ENST00000588867 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
NPC1-207ENST00000588867 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
NPC1-207ENST00000588867 Q6ZQY7 126 aa8.85□□□□□ -0.99
NPC1-207ENST00000588867 C9JAW5 83 aa8.83□□□□□ -1
NPC1-207ENST00000588867 MTURNQ8N3F0 131 aa8.83□□□□□ -1
NPC1-207ENST00000588867 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
NPC1-207ENST00000588867 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
NPC1-207ENST00000588867 SVIPQ8NHG7 77 aa8.83□□□□□ -1
NPC1-207ENST00000588867 FAM229AH3BQW9 127 aa8.83□□□□□ -1
NPC1-207ENST00000588867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
NPC1-207ENST00000588867 ORMDL1Q9P0S3 153 aa8.81□□□□□ -1
NPC1-207ENST00000588867 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
NPC1-207ENST00000588867 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
NPC1-207ENST00000588867 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
NPC1-207ENST00000588867 Q5VSD8 79 aa8.78□□□□□ -1
NPC1-207ENST00000588867 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
NPC1-207ENST00000588867 A0A1B0GV72 72 aa8.76□□□□□ -1.01
NPC1-207ENST00000588867 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
NPC1-207ENST00000588867 GHRHP01286 108 aa8.76□□□□□ -1.01
NPC1-207ENST00000588867 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
NPC1-207ENST00000588867 TEX49A0A1B0GTD5 131 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 LINC01547P58512 204 aaPredicted RBP8.75□□□□□ -1.01
NPC1-207ENST00000588867 Q8N377 158 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 SIGMAR1Q99720 223 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
NPC1-207ENST00000588867 IGLV5-48A0A075B6I7 105 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 PRO0461Q9UI25 63 aa8.75□□□□□ -1.01
NPC1-207ENST00000588867 F8W1H4 67 aa8.74□□□□□ -1.01
NPC1-207ENST00000588867 J3QR89 54 aa8.74□□□□□ -1.01
NPC1-207ENST00000588867 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms