RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
LSM7-204ENST00000587502 ZNF706Q9Y5V0 76 aaPredicted RBP13.65□□□□□ -0.22
LSM7-204ENST00000587502 SPRR1AP35321 89 aa13.64□□□□□ -0.23
LSM7-204ENST00000587502 CTAG1AP78358 180 aa13.64□□□□□ -0.23
LSM7-204ENST00000587502 LINC00304Q8N9R0 145 aa13.64□□□□□ -0.23
LSM7-204ENST00000587502 SPANXDQ9BXN6 97 aa13.64□□□□□ -0.23
LSM7-204ENST00000587502 SPANXCQ9NY87 97 aa13.64□□□□□ -0.23
LSM7-204ENST00000587502 DDTP30046 118 aa13.63□□□□□ -0.23
LSM7-204ENST00000587502 ETDCA0A1B0GVM5 59 aa13.62□□□□□ -0.23
LSM7-204ENST00000587502 IGLV6-57P01721 117 aa13.61□□□□□ -0.23
LSM7-204ENST00000587502 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
LSM7-204ENST00000587502 SPRR4Q96PI1 79 aa13.6□□□□□ -0.23
LSM7-204ENST00000587502 S100A7L2Q5SY68 101 aa13.59□□□□□ -0.23
LSM7-204ENST00000587502 Q6ZVH6 145 aa13.58□□□□□ -0.24
LSM7-204ENST00000587502 IFITM1P13164 125 aa13.57□□□□□ -0.24
LSM7-204ENST00000587502 PPDPFQ9H3Y8 114 aa13.57□□□□□ -0.24
LSM7-204ENST00000587502 JOSD1Q15040 202 aaPredicted RBP13.56□□□□□ -0.24
LSM7-204ENST00000587502 SMCR5Q8TEV8 140 aa13.55□□□□□ -0.24
LSM7-204ENST00000587502 MUSTN1Q8IVN3 82 aa13.54□□□□□ -0.24
LSM7-204ENST00000587502 SPAG11AQ6PDA7 123 aa13.53□□□□□ -0.24
LSM7-204ENST00000587502 C3orf22Q8N5N4 141 aa13.53□□□□□ -0.24
LSM7-204ENST00000587502 COPS9Q8WXC6 57 aa13.53□□□□□ -0.24
LSM7-204ENST00000587502 TRAV23DV6A0A075B6W5 121 aa13.52□□□□□ -0.25
LSM7-204ENST00000587502 B5MCH6 92 aa13.52□□□□□ -0.25
LSM7-204ENST00000587502 LINC00518Q8N0U6 118 aa13.52□□□□□ -0.25
LSM7-204ENST00000587502 COX8AP10176 69 aa13.5□□□□□ -0.25
LSM7-204ENST00000587502 OR13C6PQ8NH95 151 aa13.5□□□□□ -0.25
LSM7-204ENST00000587502 CBY1Q9Y3M2 126 aa13.49□□□□□ -0.25
LSM7-204ENST00000587502 ZNF73O43830 326 aaPredicted RBP13.48□□□□□ -0.25
LSM7-204ENST00000587502 C4orf48Q5BLP8 95 aa13.48□□□□□ -0.25
LSM7-204ENST00000587502 DLEU1O43261 78 aa13.47□□□□□ -0.25
LSM7-204ENST00000587502 LINC00483Q53H64 154 aa13.47□□□□□ -0.25
LSM7-204ENST00000587502 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
LSM7-204ENST00000587502 PAM16Q9Y3D7 125 aa13.47□□□□□ -0.25
LSM7-204ENST00000587502 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
LSM7-204ENST00000587502 Q6ZRX8 168 aa13.46□□□□□ -0.25
LSM7-204ENST00000587502 PYY3Q5JQD4 70 aa13.45□□□□□ -0.26
LSM7-204ENST00000587502 RETNLBQ9BQ08 111 aa13.45□□□□□ -0.26
LSM7-204ENST00000587502 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
LSM7-204ENST00000587502 Q9BRP9 147 aa13.44□□□□□ -0.26
LSM7-204ENST00000587502 GAGE2AQ6NT46 116 aa13.43□□□□□ -0.26
LSM7-204ENST00000587502 ERC2-IT1O76042 136 aa13.41□□□□□ -0.26
LSM7-204ENST00000587502 HINT1P49773 126 aaPredicted RBP13.41□□□□□ -0.26
LSM7-204ENST00000587502 Q8NBF4 154 aa13.4□□□□□ -0.26
LSM7-204ENST00000587502 IGLV7-46A0A075B6I9 117 aa13.39□□□□□ -0.27
LSM7-204ENST00000587502 A6NDN8 102 aa13.39□□□□□ -0.27
LSM7-204ENST00000587502 KRTAP9-2Q9BYQ4 174 aa13.39□□□□□ -0.27
LSM7-204ENST00000587502 TPRXLQ17RH7 258 aa13.38□□□□□ -0.27
LSM7-204ENST00000587502 A4D1N5 150 aa13.37□□□□□ -0.27
LSM7-204ENST00000587502 SPINK1P00995 79 aa13.37□□□□□ -0.27
LSM7-204ENST00000587502 TRAV13-2A0A0B4J235 113 aa13.36□□□□□ -0.27
LSM7-204ENST00000587502 C6orf99Q4VX62 202 aa13.36□□□□□ -0.27
LSM7-204ENST00000587502 SLC25A34Q6PIV7 304 aa13.36□□□□□ -0.27
LSM7-204ENST00000587502 SSBP3-AS1Q7Z2R9 100 aa13.36□□□□□ -0.27
LSM7-204ENST00000587502 HIST1H4GQ99525 98 aa13.36□□□□□ -0.27
LSM7-204ENST00000587502 HIGD1BQ9P298 99 aa13.35□□□□□ -0.27
LSM7-204ENST00000587502 FP248Q71RG6 208 aaPredicted RBP13.34□□□□□ -0.27
LSM7-204ENST00000587502 CDIP1Q9H305 208 aa13.34□□□□□ -0.27
LSM7-204ENST00000587502 IGLV9-49A0A0B4J1Y8 123 aa13.33□□□□□ -0.28
LSM7-204ENST00000587502 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
LSM7-204ENST00000587502 COX7BP24311 80 aa13.32□□□□□ -0.28
LSM7-204ENST00000587502 ELOF1P60002 83 aaKnown RBP13.32□□□□□ -0.28
LSM7-204ENST00000587502 MOBPQ13875 183 aa13.32□□□□□ -0.28
LSM7-204ENST00000587502 TRBV7-6A0A0J9YX20 115 aa13.31□□□□□ -0.28
LSM7-204ENST00000587502 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
LSM7-204ENST00000587502 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
LSM7-204ENST00000587502 DHRS4-AS1Q9P1J3 65 aa13.29□□□□□ -0.28
LSM7-204ENST00000587502 MUC2Q02817 5179 aa13.28□□□□□ -0.28
LSM7-204ENST00000587502 A0A0U1RQV1 116 aa13.27□□□□□ -0.29
LSM7-204ENST00000587502 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.29
LSM7-204ENST00000587502 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
LSM7-204ENST00000587502 C12orf57Q99622 126 aa13.25□□□□□ -0.29
LSM7-204ENST00000587502 KRTAP9-6A0A140TA67 174 aa13.24□□□□□ -0.29
LSM7-204ENST00000587502 C9orf153Q5TBE3 101 aa13.24□□□□□ -0.29
LSM7-204ENST00000587502 TAL2Q16559 108 aa13.23□□□□□ -0.29
LSM7-204ENST00000587502 CFC1BP0CG36 223 aa13.21□□□□□ -0.29
LSM7-204ENST00000587502 CFC1P0CG37 223 aa13.21□□□□□ -0.29
LSM7-204ENST00000587502 SLC25A20O43772 301 aa13.19□□□□□ -0.3
LSM7-204ENST00000587502 SPRR1BP22528 89 aa13.19□□□□□ -0.3
LSM7-204ENST00000587502 CEND1Q8N111 149 aa13.19□□□□□ -0.3
LSM7-204ENST00000587502 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
LSM7-204ENST00000587502 SMIM6P0DI80 62 aa13.17□□□□□ -0.3
LSM7-204ENST00000587502 Q8N377 158 aa13.17□□□□□ -0.3
LSM7-204ENST00000587502 LAMTOR3Q9UHA4 124 aa13.16□□□□□ -0.3
LSM7-204ENST00000587502 A0A0B4J2C4 111 aa13.15□□□□□ -0.3
LSM7-204ENST00000587502 LOC105371267A0A1B0GV96 52 aa13.15□□□□□ -0.3
LSM7-204ENST00000587502 VAMP3Q15836 100 aa13.15□□□□□ -0.3
LSM7-204ENST00000587502 KRTAP13-3Q3SY46 172 aa13.14□□□□□ -0.31
LSM7-204ENST00000587502 FXYD2P54710 66 aa13.13□□□□□ -0.31
LSM7-204ENST00000587502 RAB37Q96AX2 223 aa13.13□□□□□ -0.31
LSM7-204ENST00000587502 NHP2Q9NX24 153 aaKnown RBP13.12□□□□□ -0.31
LSM7-204ENST00000587502 LINC01547P58512 204 aaPredicted RBP13.11□□□□□ -0.31
LSM7-204ENST00000587502 HSD52Q0P140 79 aa13.11□□□□□ -0.31
LSM7-204ENST00000587502 LINC00575Q6W349 94 aa13.11□□□□□ -0.31
LSM7-204ENST00000587502 DEFB105AQ8NG35 78 aa13.11□□□□□ -0.31
LSM7-204ENST00000587502 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
LSM7-204ENST00000587502 A6NJY4 79 aa13.1□□□□□ -0.31
LSM7-204ENST00000587502 MUC17Q685J3 4493 aa13.1□□□□□ -0.31
LSM7-204ENST00000587502 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
LSM7-204ENST00000587502 TEX49A0A1B0GTD5 131 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms