RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 H3BUT2 72 aa9.32□□□□□ -0.92
NFIX-208ENST00000587260 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 UBE2BP63146 152 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 PRYO14603 147 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 TRIAP1O43715 76 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
NFIX-208ENST00000587260 ZNF73O43830 326 aaPredicted RBP9.3□□□□□ -0.92
NFIX-208ENST00000587260 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
NFIX-208ENST00000587260 SPRR1AP35321 89 aa9.3□□□□□ -0.92
NFIX-208ENST00000587260 NAA38Q9BRA0 125 aaKnown RBP9.3□□□□□ -0.92
NFIX-208ENST00000587260 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 A0A1W2PPM0 123 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 COX6CP09669 75 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 PSMB2P49721 201 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
NFIX-208ENST00000587260 HERC2O95714 4834 aa9.27□□□□□ -0.92
NFIX-208ENST00000587260 DIRC1Q969H9 104 aa9.27□□□□□ -0.93
NFIX-208ENST00000587260 RYR1P21817 5038 aa9.27□□□□□ -0.93
NFIX-208ENST00000587260 KRTAP4-16G5E9R7 235 aaPredicted RBP9.26□□□□□ -0.93
NFIX-208ENST00000587260 H0YGX0 51 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 LYRM7Q5U5X0 104 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 FABP2P12104 132 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 VAMP3Q15836 100 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
NFIX-208ENST00000587260 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
NFIX-208ENST00000587260 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
NFIX-208ENST00000587260 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
NFIX-208ENST00000587260 HSPG2P98160 4391 aa9.23□□□□□ -0.93
NFIX-208ENST00000587260 COX7BP24311 80 aa9.22□□□□□ -0.93
NFIX-208ENST00000587260 B5MCH6 92 aa9.21□□□□□ -0.93
NFIX-208ENST00000587260 TCL1BO95988 128 aa9.21□□□□□ -0.94
NFIX-208ENST00000587260 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
NFIX-208ENST00000587260 Q6ZRX8 168 aa9.21□□□□□ -0.94
NFIX-208ENST00000587260 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
NFIX-208ENST00000587260 A0A1B0GV90 55 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 ETDCA0A1B0GVM5 59 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 A0A1B0GX51 115 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 H0Y9J4 135 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 LST1O00453 97 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 BCE1O60756 84 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
NFIX-208ENST00000587260 LINC00575Q6W349 94 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 CLEC2BQ92478 149 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 FAM218AQ96MZ4 157 aa9.2□□□□□ -0.94
NFIX-208ENST00000587260 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
NFIX-208ENST00000587260 K7EP34 96 aa9.18□□□□□ -0.94
NFIX-208ENST00000587260 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
NFIX-208ENST00000587260 TRACP01848 142 aa9.17□□□□□ -0.94
NFIX-208ENST00000587260 Q5VSD8 79 aa9.17□□□□□ -0.94
NFIX-208ENST00000587260 GTF2H5Q6ZYL4 71 aa9.16□□□□□ -0.94
NFIX-208ENST00000587260 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
NFIX-208ENST00000587260 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
NFIX-208ENST00000587260 KRTAP17-1Q9BYP8 105 aa9.16□□□□□ -0.94
NFIX-208ENST00000587260 FAT1Q14517 4588 aa9.16□□□□□ -0.94
NFIX-208ENST00000587260 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
NFIX-208ENST00000587260 J3QL48 77 aa9.15□□□□□ -0.94
NFIX-208ENST00000587260 DHRS4-AS1Q9P1J3 65 aa9.15□□□□□ -0.94
NFIX-208ENST00000587260 hADV29S1A0JD25 119 aa9.15□□□□□ -0.95
NFIX-208ENST00000587260 SLC25A20O43772 301 aa9.15□□□□□ -0.95
NFIX-208ENST00000587260 SNCGO76070 127 aa9.15□□□□□ -0.95
NFIX-208ENST00000587260 PRLHP81277 87 aa9.15□□□□□ -0.95
NFIX-208ENST00000587260 Q9BRP9 147 aa9.15□□□□□ -0.95
NFIX-208ENST00000587260 H3BMG7 143 aa9.13□□□□□ -0.95
NFIX-208ENST00000587260 UBE2AP49459 152 aa9.13□□□□□ -0.95
NFIX-208ENST00000587260 Q8N1X5 172 aa9.13□□□□□ -0.95
NFIX-208ENST00000587260 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
NFIX-208ENST00000587260 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
NFIX-208ENST00000587260 IGLV7-43P04211 117 aa9.12□□□□□ -0.95
NFIX-208ENST00000587260 SMCR5Q8TEV8 140 aa9.12□□□□□ -0.95
NFIX-208ENST00000587260 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
NFIX-208ENST00000587260 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
NFIX-208ENST00000587260 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
NFIX-208ENST00000587260 ZNF861PO60384 105 aa9.1□□□□□ -0.95
NFIX-208ENST00000587260 DNAL4O96015 105 aa9.1□□□□□ -0.95
NFIX-208ENST00000587260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
NFIX-208ENST00000587260 ERC2-IT1O76042 136 aa9.08□□□□□ -0.96
NFIX-208ENST00000587260 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
NFIX-208ENST00000587260 OCIAD2Q56VL3 154 aa9.07□□□□□ -0.96
NFIX-208ENST00000587260 Q6ZQY7 126 aa9.07□□□□□ -0.96
NFIX-208ENST00000587260 C9JAW5 83 aa9.06□□□□□ -0.96
NFIX-208ENST00000587260 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
NFIX-208ENST00000587260 PRO0461Q9UI25 63 aa9.06□□□□□ -0.96
NFIX-208ENST00000587260 H3BQ85 93 aa9.05□□□□□ -0.96
NFIX-208ENST00000587260 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
NFIX-208ENST00000587260 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
NFIX-208ENST00000587260 F8W1H4 67 aa9.05□□□□□ -0.96
NFIX-208ENST00000587260 GHRHP01286 108 aa9.05□□□□□ -0.96
NFIX-208ENST00000587260 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
NFIX-208ENST00000587260 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
NFIX-208ENST00000587260 H3BT86 120 aa9.04□□□□□ -0.96
NFIX-208ENST00000587260 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
NFIX-208ENST00000587260 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
NFIX-208ENST00000587260 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
NFIX-208ENST00000587260 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
NFIX-208ENST00000587260 TMEM256-PLSCR3K7ERE1 68 aa9.02□□□□□ -0.97
NFIX-208ENST00000587260 ST20-AS1Q8NBB2 130 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms