RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
RETREG3-204ENST00000586796 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
RETREG3-204ENST00000586796 LINC00337Q8N6G1 96 aa12.88□□□□□ -0.35
RETREG3-204ENST00000586796 KRTAP1-4P0C5Y4 121 aa12.87□□□□□ -0.35
RETREG3-204ENST00000586796 PRR26Q8N8Z3 221 aa12.87□□□□□ -0.35
RETREG3-204ENST00000586796 KRTAP4-16G5E9R7 235 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-204ENST00000586796 DMBT1Q9UGM3 2413 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-204ENST00000586796 DLEU1O43261 78 aa12.84□□□□□ -0.35
RETREG3-204ENST00000586796 KRTAP10-8P60410 259 aa12.84□□□□□ -0.35
RETREG3-204ENST00000586796 PPDPFQ9H3Y8 114 aa12.84□□□□□ -0.35
RETREG3-204ENST00000586796 B5MCH6 92 aa12.83□□□□□ -0.36
RETREG3-204ENST00000586796 ZNF73O43830 326 aaPredicted RBP12.83□□□□□ -0.36
RETREG3-204ENST00000586796 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
RETREG3-204ENST00000586796 ANAPC11Q9NYG5 84 aa12.83□□□□□ -0.36
RETREG3-204ENST00000586796 A6NDN8 102 aa12.82□□□□□ -0.36
RETREG3-204ENST00000586796 SLC25A34Q6PIV7 304 aa12.82□□□□□ -0.36
RETREG3-204ENST00000586796 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
RETREG3-204ENST00000586796 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
RETREG3-204ENST00000586796 A4D1N5 150 aa12.78□□□□□ -0.36
RETREG3-204ENST00000586796 HINT1P49773 126 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-204ENST00000586796 HERC1Q15751 4861 aa12.77□□□□□ -0.36
RETREG3-204ENST00000586796 TNXBP22105 4242 aa12.77□□□□□ -0.36
RETREG3-204ENST00000586796 Q6ZRX8 168 aa12.77□□□□□ -0.37
RETREG3-204ENST00000586796 TRAV13-2A0A0B4J235 113 aa12.75□□□□□ -0.37
RETREG3-204ENST00000586796 C12orf57Q99622 126 aa12.75□□□□□ -0.37
RETREG3-204ENST00000586796 Q9BRP9 147 aa12.75□□□□□ -0.37
RETREG3-204ENST00000586796 A0A087X002 238 aa12.74□□□□□ -0.37
RETREG3-204ENST00000586796 CRYGAP11844 174 aa12.74□□□□□ -0.37
RETREG3-204ENST00000586796 RPL13AP40429 203 aaKnown RBP12.74□□□□□ -0.37
RETREG3-204ENST00000586796 C6orf99Q4VX62 202 aa12.74□□□□□ -0.37
RETREG3-204ENST00000586796 C2orf91Q6ZV80 131 aa12.74□□□□□ -0.37
RETREG3-204ENST00000586796 HIGD1BQ9P298 99 aa12.74□□□□□ -0.37
RETREG3-204ENST00000586796 ERC2-IT1O76042 136 aa12.73□□□□□ -0.37
RETREG3-204ENST00000586796 SPRR4Q96PI1 79 aa12.73□□□□□ -0.37
RETREG3-204ENST00000586796 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-204ENST00000586796 COX7BP24311 80 aa12.7□□□□□ -0.38
RETREG3-204ENST00000586796 FAM229BQ4G0N7 80 aa12.69□□□□□ -0.38
RETREG3-204ENST00000586796 TYMSOSQ8TAI1 123 aa12.69□□□□□ -0.38
RETREG3-204ENST00000586796 SMIM11BQ8TCY0 68 aa12.68□□□□□ -0.38
RETREG3-204ENST00000586796 KRTAP13-2Q52LG2 175 aa12.67□□□□□ -0.38
RETREG3-204ENST00000586796 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
RETREG3-204ENST00000586796 ELOF1P60002 83 aaKnown RBP12.66□□□□□ -0.38
RETREG3-204ENST00000586796 TAL2Q16559 108 aa12.64□□□□□ -0.39
RETREG3-204ENST00000586796 CEND1Q8N111 149 aa12.64□□□□□ -0.39
RETREG3-204ENST00000586796 DHRS4-AS1Q9P1J3 65 aa12.64□□□□□ -0.39
RETREG3-204ENST00000586796 C3orf22Q8N5N4 141 aa12.63□□□□□ -0.39
RETREG3-204ENST00000586796 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
RETREG3-204ENST00000586796 TRBV7-6A0A0J9YX20 115 aa12.62□□□□□ -0.39
RETREG3-204ENST00000586796 A0A1B0GWB2 263 aa12.62□□□□□ -0.39
RETREG3-204ENST00000586796 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
RETREG3-204ENST00000586796 CFC1P0CG37 223 aa12.62□□□□□ -0.39
RETREG3-204ENST00000586796 UQCR10Q9UDW1 63 aa12.62□□□□□ -0.39
RETREG3-204ENST00000586796 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
RETREG3-204ENST00000586796 H7C2G1 150 aa12.6□□□□□ -0.39
RETREG3-204ENST00000586796 LINC00483Q53H64 154 aa12.59□□□□□ -0.39
RETREG3-204ENST00000586796 PRO1933Q9H354 126 aa12.58□□□□□ -0.4
RETREG3-204ENST00000586796 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
RETREG3-204ENST00000586796 A6NJY4 79 aa12.57□□□□□ -0.4
RETREG3-204ENST00000586796 FXYD2P54710 66 aa12.57□□□□□ -0.4
RETREG3-204ENST00000586796 HSD52Q0P140 79 aa12.57□□□□□ -0.4
RETREG3-204ENST00000586796 VAMP3Q15836 100 aa12.57□□□□□ -0.4
RETREG3-204ENST00000586796 TSPAN13O95857 204 aa12.56□□□□□ -0.4
RETREG3-204ENST00000586796 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
RETREG3-204ENST00000586796 IGLV9-49A0A0B4J1Y8 123 aa12.55□□□□□ -0.4
RETREG3-204ENST00000586796 A0A0B4J2C4 111 aa12.55□□□□□ -0.4
RETREG3-204ENST00000586796 LOC105371267A0A1B0GV96 52 aa12.55□□□□□ -0.4
RETREG3-204ENST00000586796 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
RETREG3-204ENST00000586796 LINC00304Q8N9R0 145 aa12.52□□□□□ -0.41
RETREG3-204ENST00000586796 SLC25A20O43772 301 aa12.51□□□□□ -0.41
RETREG3-204ENST00000586796 Q1RN00 199 aa12.51□□□□□ -0.41
RETREG3-204ENST00000586796 NHP2Q9NX24 153 aaKnown RBP12.51□□□□□ -0.41
RETREG3-204ENST00000586796 MOBPQ13875 183 aa12.5□□□□□ -0.41
RETREG3-204ENST00000586796 PRO1854Q9UHT4 67 aa12.5□□□□□ -0.41
RETREG3-204ENST00000586796 BVES-AS1Q5T3Y7 98 aa12.48□□□□□ -0.41
RETREG3-204ENST00000586796 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
RETREG3-204ENST00000586796 LINC00575Q6W349 94 aa12.48□□□□□ -0.41
RETREG3-204ENST00000586796 Q8NBF4 154 aa12.48□□□□□ -0.41
RETREG3-204ENST00000586796 K7ERJ3 54 aa12.46□□□□□ -0.41
RETREG3-204ENST00000586796 SPRR1BP22528 89 aa12.46□□□□□ -0.41
RETREG3-204ENST00000586796 HMCN2Q8NDA2 5059 aa12.45□□□□□ -0.42
RETREG3-204ENST00000586796 TEX49A0A1B0GTD5 131 aa12.45□□□□□ -0.42
RETREG3-204ENST00000586796 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
RETREG3-204ENST00000586796 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
RETREG3-204ENST00000586796 LAMTOR3Q9UHA4 124 aa12.44□□□□□ -0.42
RETREG3-204ENST00000586796 LINC01547P58512 204 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-204ENST00000586796 SSBP3-AS1Q7Z2R9 100 aa12.42□□□□□ -0.42
RETREG3-204ENST00000586796 IGLV5-48A0A075B6I7 105 aa12.4□□□□□ -0.42
RETREG3-204ENST00000586796 CTAG1AP78358 180 aa12.4□□□□□ -0.42
RETREG3-204ENST00000586796 SPAG11AQ6PDA7 123 aa12.4□□□□□ -0.42
RETREG3-204ENST00000586796 Q6ZQY7 126 aa12.4□□□□□ -0.42
RETREG3-204ENST00000586796 H0YGX0 51 aa12.38□□□□□ -0.43
RETREG3-204ENST00000586796 Q8N377 158 aa12.38□□□□□ -0.43
RETREG3-204ENST00000586796 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
RETREG3-204ENST00000586796 PSMB2P49721 201 aa12.37□□□□□ -0.43
RETREG3-204ENST00000586796 PRR4Q16378 134 aa12.37□□□□□ -0.43
RETREG3-204ENST00000586796 TRIAP1O43715 76 aa12.36□□□□□ -0.43
RETREG3-204ENST00000586796 SMIM29Q86T20 159 aa12.36□□□□□ -0.43
RETREG3-204ENST00000586796 FAM218AQ96MZ4 157 aa12.35□□□□□ -0.43
RETREG3-204ENST00000586796 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-204ENST00000586796 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms