RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 LMO7Q8WWI1 1683 aa0.99□□□□□ -2.25
NLK-206ENST00000584878 ROS1P08922 2347 aa0.99□□□□□ -2.25
NLK-206ENST00000584878 TNCP24821 2201 aa0.99□□□□□ -2.25
NLK-206ENST00000584878 ASCC3Q8N3C0 2202 aaKnown RBP0.99□□□□□ -2.25
NLK-206ENST00000584878 CACNA1AO00555 2505 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 SMIM27A0A1W2PRY6 76 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 IGIPA6NJ69 53 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 PIN1P1O15428 100 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 COX6B1P14854 86 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 BPTFQ12830 3046 aa0.98□□□□□ -2.25
NLK-206ENST00000584878 PKD1L2Q7Z442 2459 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 CLTCL1P53675 1640 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 CACNA1BQ00975 2339 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 LINC01546A6NGU7 62 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 M0R1W7 72 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
NLK-206ENST00000584878 HAMPP81172 84 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 SERF2P84101 59 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 SPINK13Q1W4C9 94 aa0.97□□□□□ -2.25
NLK-206ENST00000584878 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
NLK-206ENST00000584878 ETDCA0A1B0GVM5 59 aa0.96□□□□□ -2.26
NLK-206ENST00000584878 CPSF4LA6NMK7 179 aaKnown RBP0.96□□□□□ -2.26
NLK-206ENST00000584878 I3L3M4 83 aa0.96□□□□□ -2.26
NLK-206ENST00000584878 RPL38P63173 70 aaKnown RBP0.96□□□□□ -2.26
NLK-206ENST00000584878 SSBP3-AS1Q7Z2R9 100 aa0.96□□□□□ -2.26
NLK-206ENST00000584878 TECTAO75443 2155 aa0.96□□□□□ -2.26
NLK-206ENST00000584878 URB1O60287 2271 aaKnown RBP0.95□□□□□ -2.26
NLK-206ENST00000584878 UNC79Q9P2D8 2635 aa0.95□□□□□ -2.26
NLK-206ENST00000584878 AHCTF1Q8WYP5 2266 aa0.95□□□□□ -2.26
NLK-206ENST00000584878 KNTC1P50748 2209 aa0.95□□□□□ -2.26
NLK-206ENST00000584878 CNOT1A5YKK6 2376 aaKnown RBP0.94□□□□□ -2.26
NLK-206ENST00000584878 NAV3Q8IVL0 2385 aa0.94□□□□□ -2.26
NLK-206ENST00000584878 ZDBF2Q9HCK1 2354 aa0.94□□□□□ -2.26
NLK-206ENST00000584878 DEFB131BA0A096LNP1 70 aa0.94□□□□□ -2.26
NLK-206ENST00000584878 SPTY2D1-AS1A0A0U1RR47 76 aa0.94□□□□□ -2.26
NLK-206ENST00000584878 CACNA1EQ15878 2313 aa0.93□□□□□ -2.26
NLK-206ENST00000584878 FAM208BQ5VWN6 2430 aa0.93□□□□□ -2.26
NLK-206ENST00000584878 MRPL33O75394 65 aaKnown RBP0.93□□□□□ -2.26
NLK-206ENST00000584878 UBE2DNLQ8IWF7 75 aa0.93□□□□□ -2.26
NLK-206ENST00000584878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.93□□□□□ -2.262e-6■■■■□ 24
NLK-206ENST00000584878 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
NLK-206ENST00000584878 JMJD1CQ15652 2540 aa0.92□□□□□ -2.26
NLK-206ENST00000584878 K7EIL1 84 aa0.92□□□□□ -2.26
NLK-206ENST00000584878 CNTRLQ7Z7A1 2325 aa0.92□□□□□ -2.26
NLK-206ENST00000584878 I3L2K1 104 aa0.91□□□□□ -2.26
NLK-206ENST00000584878 SNRPGP62308 76 aaKnown RBP0.91□□□□□ -2.26
NLK-206ENST00000584878 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
NLK-206ENST00000584878 H0YGX0 51 aa0.9□□□□□ -2.27
NLK-206ENST00000584878 DEFB123Q8N688 67 aa0.9□□□□□ -2.27
NLK-206ENST00000584878 PIEZO2Q9H5I5 2752 aa0.9□□□□□ -2.27
NLK-206ENST00000584878 GOLGA4Q13439 2230 aaKnown RBP0.89□□□□□ -2.27
NLK-206ENST00000584878 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
NLK-206ENST00000584878 K7EQZ3 153 aa0.89□□□□□ -2.27
NLK-206ENST00000584878 SPINK4O60575 86 aa0.89□□□□□ -2.27
NLK-206ENST00000584878 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
NLK-206ENST00000584878 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
NLK-206ENST00000584878 TP53AIP1Q9HCN2 124 aa0.88□□□□□ -2.27
NLK-206ENST00000584878 TIMM8BQ9Y5J9 83 aaPredicted RBP0.88□□□□□ -2.27
NLK-206ENST00000584878 LYNX1G3V0Z9 82 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 NDUFA3O95167 84 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 CRIP1P50238 77 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 LINC00158P58513 81 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 FXYD6P3P58550 94 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 COX6B2Q6YFQ2 88 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 Q8IZM0 81 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 USMG5Q96IX5 58 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 TMEM167BQ9NRX6 74 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 CDKN2A-AS1Q9UH64 79 aa0.87□□□□□ -2.27
NLK-206ENST00000584878 DOPEY2Q9Y3R5 2298 aa0.86□□□□□ -2.27
NLK-206ENST00000584878 CCL22O00626 93 aa0.86□□□□□ -2.27
NLK-206ENST00000584878 PIGYQ3MUY2 71 aa0.86□□□□□ -2.27
NLK-206ENST00000584878 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
NLK-206ENST00000584878 PRO3102Q9H379 93 aa0.86□□□□□ -2.27
NLK-206ENST00000584878 LOC730098B7Z3J9 87 aa0.85□□□□□ -2.27
NLK-206ENST00000584878 H0YAA0 97 aa0.85□□□□□ -2.27
NLK-206ENST00000584878 ALMS1Q8TCU4 4167 aa0.85□□□□□ -2.27
NLK-206ENST00000584878 FBN2P35556 2912 aa0.85□□□□□ -2.27
NLK-206ENST00000584878 PTPRZ1P23471 2315 aaPredicted RBP0.84□□□□□ -2.27
NLK-206ENST00000584878 SRCAPQ6ZRS2 3230 aa0.84□□□□□ -2.27
NLK-206ENST00000584878 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.27
NLK-206ENST00000584878 COX6A2Q02221 97 aa0.84□□□□□ -2.27
NLK-206ENST00000584878 LINC00308Q8TCZ7 52 aa0.84□□□□□ -2.27
NLK-206ENST00000584878 SMIM2Q9BVW6 85 aa0.83□□□□□ -2.28
NLK-206ENST00000584878 C10orf95Q9H7T3 257 aa0.83□□□□□ -2.28
NLK-206ENST00000584878 PDE4DIPQ5VU43 2346 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 NDUFA1O15239 70 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 Q5VSD8 79 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 PRO0255Q9UI72 69 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 PLCE1Q9P212 2302 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 PTPRQQ9UMZ3 2332 aa0.82□□□□□ -2.28
NLK-206ENST00000584878 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
NLK-206ENST00000584878 ZNF462Q96JM2 2506 aa0.81□□□□□ -2.28
NLK-206ENST00000584878 TFF3Q07654 80 aa0.81□□□□□ -2.28
NLK-206ENST00000584878 LELP1Q5T871 98 aa0.81□□□□□ -2.28
NLK-206ENST00000584878 MINOS1Q5TGZ0 78 aa0.81□□□□□ -2.28
NLK-206ENST00000584878 C6orf48Q9UBA6 75 aa0.81□□□□□ -2.28
NLK-206ENST00000584878 TPRP12270 2363 aaKnown RBP0.8□□□□□ -2.28
NLK-206ENST00000584878 C2CD3Q4AC94 2353 aa0.8□□□□□ -2.28
NLK-206ENST00000584878 REV3LO60673 3130 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms