RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 REG3GQ6UW15 175 aa10.4□□□□□ -0.74
CDK5RAP3-230ENST00000584042 KRTAP11-1Q8IUC1 163 aa10.4□□□□□ -0.74
CDK5RAP3-230ENST00000584042 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-230ENST00000584042 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
CDK5RAP3-230ENST00000584042 C6orf99Q4VX62 202 aa10.39□□□□□ -0.75
CDK5RAP3-230ENST00000584042 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
CDK5RAP3-230ENST00000584042 TRIAP1O43715 76 aa10.38□□□□□ -0.75
CDK5RAP3-230ENST00000584042 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
CDK5RAP3-230ENST00000584042 KRTAP4-16G5E9R7 235 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-230ENST00000584042 PSMB2P49721 201 aa10.36□□□□□ -0.75
CDK5RAP3-230ENST00000584042 ETDCA0A1B0GVM5 59 aa10.35□□□□□ -0.75
CDK5RAP3-230ENST00000584042 ELOF1P60002 83 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-230ENST00000584042 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
CDK5RAP3-230ENST00000584042 PSORS1C2Q9UIG4 136 aa10.35□□□□□ -0.75
CDK5RAP3-230ENST00000584042 H3BUT2 72 aa10.34□□□□□ -0.75
CDK5RAP3-230ENST00000584042 BCE1O60756 84 aa10.34□□□□□ -0.75
CDK5RAP3-230ENST00000584042 COX6CP09669 75 aa10.34□□□□□ -0.75
CDK5RAP3-230ENST00000584042 VAMP3Q15836 100 aa10.33□□□□□ -0.76
CDK5RAP3-230ENST00000584042 NAA38Q9BRA0 125 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-230ENST00000584042 HSPG2P98160 4391 aa10.33□□□□□ -0.76
CDK5RAP3-230ENST00000584042 RYR1P21817 5038 aa10.32□□□□□ -0.76
CDK5RAP3-230ENST00000584042 B5MCH6 92 aa10.32□□□□□ -0.76
CDK5RAP3-230ENST00000584042 H0YGX0 51 aa10.32□□□□□ -0.76
CDK5RAP3-230ENST00000584042 COX7BP24311 80 aa10.32□□□□□ -0.76
CDK5RAP3-230ENST00000584042 Q6ZRX8 168 aa10.32□□□□□ -0.76
CDK5RAP3-230ENST00000584042 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
CDK5RAP3-230ENST00000584042 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
CDK5RAP3-230ENST00000584042 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
CDK5RAP3-230ENST00000584042 H0Y9J4 135 aa10.3□□□□□ -0.76
CDK5RAP3-230ENST00000584042 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
CDK5RAP3-230ENST00000584042 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
CDK5RAP3-230ENST00000584042 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
CDK5RAP3-230ENST00000584042 FABP2P12104 132 aa10.28□□□□□ -0.76
CDK5RAP3-230ENST00000584042 UBE2AP49459 152 aa10.28□□□□□ -0.76
CDK5RAP3-230ENST00000584042 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-230ENST00000584042 PRLHP81277 87 aa10.27□□□□□ -0.77
CDK5RAP3-230ENST00000584042 FAT1Q14517 4588 aa10.26□□□□□ -0.77
CDK5RAP3-230ENST00000584042 VPS13BQ7Z7G8 4022 aa10.26□□□□□ -0.77
CDK5RAP3-230ENST00000584042 A0A1B0GX51 115 aa10.26□□□□□ -0.77
CDK5RAP3-230ENST00000584042 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
CDK5RAP3-230ENST00000584042 DHRS4-AS1Q9P1J3 65 aa10.26□□□□□ -0.77
CDK5RAP3-230ENST00000584042 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 INAFM2P0DMQ5 153 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 CLEC2BQ92478 149 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 FAM218AQ96MZ4 157 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 Q9BRP9 147 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 BIRC6Q9NR09 4857 aa10.25□□□□□ -0.77
CDK5RAP3-230ENST00000584042 TRBV20-1A0A075B6N2 111 aa10.24□□□□□ -0.77
CDK5RAP3-230ENST00000584042 LST1O00453 97 aa10.24□□□□□ -0.77
CDK5RAP3-230ENST00000584042 SLC25A20O43772 301 aa10.24□□□□□ -0.77
CDK5RAP3-230ENST00000584042 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-230ENST00000584042 ZNF861PO60384 105 aa10.23□□□□□ -0.77
CDK5RAP3-230ENST00000584042 TCL1BO95988 128 aa10.23□□□□□ -0.77
CDK5RAP3-230ENST00000584042 SMCR5Q8TEV8 140 aa10.23□□□□□ -0.77
CDK5RAP3-230ENST00000584042 KIAA1109Q2LD37 5005 aa10.22□□□□□ -0.77
CDK5RAP3-230ENST00000584042 TRACP01848 142 aa10.22□□□□□ -0.77
CDK5RAP3-230ENST00000584042 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
CDK5RAP3-230ENST00000584042 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
CDK5RAP3-230ENST00000584042 hADV29S1A0JD25 119 aa10.21□□□□□ -0.77
CDK5RAP3-230ENST00000584042 SNCGO76070 127 aa10.21□□□□□ -0.77
CDK5RAP3-230ENST00000584042 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.77
CDK5RAP3-230ENST00000584042 K7EP34 96 aa10.19□□□□□ -0.78
CDK5RAP3-230ENST00000584042 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-230ENST00000584042 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
CDK5RAP3-230ENST00000584042 DNAL4O96015 105 aa10.18□□□□□ -0.78
CDK5RAP3-230ENST00000584042 PLA2G1BP04054 148 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-230ENST00000584042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-230ENST00000584042 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
CDK5RAP3-230ENST00000584042 Q5VSD8 79 aa10.16□□□□□ -0.78
CDK5RAP3-230ENST00000584042 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.78
CDK5RAP3-230ENST00000584042 Q6ZQY7 126 aa10.15□□□□□ -0.78
CDK5RAP3-230ENST00000584042 GTF2H5Q6ZYL4 71 aa10.15□□□□□ -0.78
CDK5RAP3-230ENST00000584042 ZNF706Q9Y5V0 76 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-230ENST00000584042 A0A1B0GV90 55 aa10.13□□□□□ -0.79
CDK5RAP3-230ENST00000584042 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
CDK5RAP3-230ENST00000584042 Q8N1X5 172 aa10.13□□□□□ -0.79
CDK5RAP3-230ENST00000584042 IGLV5-48A0A075B6I7 105 aa10.12□□□□□ -0.79
CDK5RAP3-230ENST00000584042 H3BMG7 143 aa10.12□□□□□ -0.79
CDK5RAP3-230ENST00000584042 SPINK6Q6UWN8 80 aa10.12□□□□□ -0.79
CDK5RAP3-230ENST00000584042 ORMDL1Q9P0S3 153 aa10.12□□□□□ -0.79
CDK5RAP3-230ENST00000584042 GHRHP01286 108 aa10.11□□□□□ -0.79
CDK5RAP3-230ENST00000584042 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
CDK5RAP3-230ENST00000584042 H3BQ85 93 aa10.1□□□□□ -0.79
CDK5RAP3-230ENST00000584042 ST20-AS1Q8NBB2 130 aa10.1□□□□□ -0.79
CDK5RAP3-230ENST00000584042 SPRR4Q96PI1 79 aa10.1□□□□□ -0.79
CDK5RAP3-230ENST00000584042 C9JAW5 83 aa10.09□□□□□ -0.79
CDK5RAP3-230ENST00000584042 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-230ENST00000584042 SPRR1BP22528 89 aa10.08□□□□□ -0.8
CDK5RAP3-230ENST00000584042 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
CDK5RAP3-230ENST00000584042 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
CDK5RAP3-230ENST00000584042 H3BT86 120 aa10.06□□□□□ -0.8
CDK5RAP3-230ENST00000584042 KRTAP17-1Q9BYP8 105 aa10.06□□□□□ -0.8
CDK5RAP3-230ENST00000584042 HERC2O95714 4834 aa10.06□□□□□ -0.8
CDK5RAP3-230ENST00000584042 Q8N377 158 aa10.05□□□□□ -0.8
CDK5RAP3-230ENST00000584042 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
CDK5RAP3-230ENST00000584042 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
CDK5RAP3-230ENST00000584042 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
CDK5RAP3-230ENST00000584042 MTURNQ8N3F0 131 aa10.03□□□□□ -0.8
CDK5RAP3-230ENST00000584042 DEFB105AQ8NG35 78 aa10.03□□□□□ -0.8
CDK5RAP3-230ENST00000584042 PRO0461Q9UI25 63 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms