RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 IFITM1P13164 125 aa9.32□□□□□ -0.92
SKA2-209ENST00000583976 PRR4Q16378 134 aa9.32□□□□□ -0.92
SKA2-209ENST00000583976 Q6ZVH6 145 aa9.32□□□□□ -0.92
SKA2-209ENST00000583976 FAM19A1Q7Z5A9 133 aa9.32□□□□□ -0.92
SKA2-209ENST00000583976 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
SKA2-209ENST00000583976 PRLHP81277 87 aa9.31□□□□□ -0.92
SKA2-209ENST00000583976 OR13C6PQ8NH95 151 aa9.31□□□□□ -0.92
SKA2-209ENST00000583976 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
SKA2-209ENST00000583976 PRYO14603 147 aa9.3□□□□□ -0.92
SKA2-209ENST00000583976 DLEU1O43261 78 aa9.3□□□□□ -0.92
SKA2-209ENST00000583976 S100A12P80511 92 aa9.3□□□□□ -0.92
SKA2-209ENST00000583976 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
SKA2-209ENST00000583976 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
SKA2-209ENST00000583976 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
SKA2-209ENST00000583976 LINC00518Q8N0U6 118 aa9.28□□□□□ -0.92
SKA2-209ENST00000583976 HIST1H4GQ99525 98 aa9.28□□□□□ -0.92
SKA2-209ENST00000583976 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
SKA2-209ENST00000583976 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
SKA2-209ENST00000583976 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
SKA2-209ENST00000583976 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
SKA2-209ENST00000583976 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
SKA2-209ENST00000583976 SPRR1AP35321 89 aa9.26□□□□□ -0.93
SKA2-209ENST00000583976 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
SKA2-209ENST00000583976 A6NDN8 102 aa9.25□□□□□ -0.93
SKA2-209ENST00000583976 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
SKA2-209ENST00000583976 A0A087X002 238 aa9.24□□□□□ -0.93
SKA2-209ENST00000583976 TSPAN13O95857 204 aa9.24□□□□□ -0.93
SKA2-209ENST00000583976 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
SKA2-209ENST00000583976 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
SKA2-209ENST00000583976 A4D1N5 150 aa9.23□□□□□ -0.93
SKA2-209ENST00000583976 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
SKA2-209ENST00000583976 HIGD1BQ9P298 99 aa9.23□□□□□ -0.93
SKA2-209ENST00000583976 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
SKA2-209ENST00000583976 B5MCH6 92 aa9.21□□□□□ -0.94
SKA2-209ENST00000583976 C12orf57Q99622 126 aa9.21□□□□□ -0.94
SKA2-209ENST00000583976 CBY1Q9Y3M2 126 aa9.21□□□□□ -0.94
SKA2-209ENST00000583976 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
SKA2-209ENST00000583976 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
SKA2-209ENST00000583976 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
SKA2-209ENST00000583976 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
SKA2-209ENST00000583976 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
SKA2-209ENST00000583976 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
SKA2-209ENST00000583976 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
SKA2-209ENST00000583976 Q6ZRX8 168 aa9.17□□□□□ -0.94
SKA2-209ENST00000583976 UQCR10Q9UDW1 63 aa9.17□□□□□ -0.94
SKA2-209ENST00000583976 Q9BRP9 147 aa9.16□□□□□ -0.94
SKA2-209ENST00000583976 PRO1933Q9H354 126 aa9.16□□□□□ -0.94
SKA2-209ENST00000583976 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
SKA2-209ENST00000583976 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
SKA2-209ENST00000583976 TAL2Q16559 108 aa9.15□□□□□ -0.94
SKA2-209ENST00000583976 CEND1Q8N111 149 aa9.15□□□□□ -0.94
SKA2-209ENST00000583976 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
SKA2-209ENST00000583976 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
SKA2-209ENST00000583976 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
SKA2-209ENST00000583976 KRTAP9-2Q9BYQ4 174 aa9.14□□□□□ -0.95
SKA2-209ENST00000583976 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
SKA2-209ENST00000583976 CFC1P0CG37 223 aa9.13□□□□□ -0.95
SKA2-209ENST00000583976 COX7BP24311 80 aa9.13□□□□□ -0.95
SKA2-209ENST00000583976 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
SKA2-209ENST00000583976 CRYGAP11844 174 aa9.12□□□□□ -0.95
SKA2-209ENST00000583976 H7C2G1 150 aa9.11□□□□□ -0.95
SKA2-209ENST00000583976 FXYD2P54710 66 aa9.11□□□□□ -0.95
SKA2-209ENST00000583976 ELOF1P60002 83 aaKnown RBP9.11□□□□□ -0.95
SKA2-209ENST00000583976 HSD52Q0P140 79 aa9.11□□□□□ -0.95
SKA2-209ENST00000583976 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
SKA2-209ENST00000583976 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
SKA2-209ENST00000583976 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
SKA2-209ENST00000583976 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
SKA2-209ENST00000583976 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
SKA2-209ENST00000583976 A6NJY4 79 aa9.09□□□□□ -0.95
SKA2-209ENST00000583976 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
SKA2-209ENST00000583976 GAGE2AQ6NT46 116 aa9.09□□□□□ -0.95
SKA2-209ENST00000583976 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
SKA2-209ENST00000583976 ST20-AS1Q8NBB2 130 aa9.08□□□□□ -0.96
SKA2-209ENST00000583976 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
SKA2-209ENST00000583976 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
SKA2-209ENST00000583976 TRBV7-6A0A0J9YX20 115 aa9.07□□□□□ -0.96
SKA2-209ENST00000583976 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
SKA2-209ENST00000583976 VAMP3Q15836 100 aa9.05□□□□□ -0.96
SKA2-209ENST00000583976 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
SKA2-209ENST00000583976 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
SKA2-209ENST00000583976 Q1RN00 199 aa9.04□□□□□ -0.96
SKA2-209ENST00000583976 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
SKA2-209ENST00000583976 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
SKA2-209ENST00000583976 K7ERJ3 54 aa9.02□□□□□ -0.97
SKA2-209ENST00000583976 CTAG1AP78358 180 aa9.02□□□□□ -0.97
SKA2-209ENST00000583976 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
SKA2-209ENST00000583976 DEFB105AQ8NG35 78 aa9.02□□□□□ -0.97
SKA2-209ENST00000583976 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
SKA2-209ENST00000583976 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
SKA2-209ENST00000583976 TSTD3H0UI37 97 aa9□□□□□ -0.97
SKA2-209ENST00000583976 SLC25A20O43772 301 aa9□□□□□ -0.97
SKA2-209ENST00000583976 LINC00575Q6W349 94 aa9□□□□□ -0.97
SKA2-209ENST00000583976 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
SKA2-209ENST00000583976 CDIP1Q9H305 208 aa8.99□□□□□ -0.97
SKA2-209ENST00000583976 IGLV7-46A0A075B6I9 117 aa8.97□□□□□ -0.97
SKA2-209ENST00000583976 hADV29S1A0JD25 119 aa8.97□□□□□ -0.97
SKA2-209ENST00000583976 MOBPQ13875 183 aa8.96□□□□□ -0.98
SKA2-209ENST00000583976 TEX49A0A1B0GTD5 131 aa8.94□□□□□ -0.98
SKA2-209ENST00000583976 M0R143 59 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms