RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
SMCHD1-210ENST00000583800 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
SMCHD1-210ENST00000583800 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
SMCHD1-210ENST00000583800 NDUFA6P56556 154 aa4.37□□□□□ -1.71
SMCHD1-210ENST00000583800 COX17Q14061 63 aa4.37□□□□□ -1.71
SMCHD1-210ENST00000583800 FA2HQ7L5A8 372 aa4.37□□□□□ -1.71
SMCHD1-210ENST00000583800 A0A096LNJ9 63 aa4.36□□□□□ -1.71
SMCHD1-210ENST00000583800 SNAPINO95295 136 aa4.36□□□□□ -1.71
SMCHD1-210ENST00000583800 SMCO4Q9NRQ5 59 aa4.36□□□□□ -1.71
SMCHD1-210ENST00000583800 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
SMCHD1-210ENST00000583800 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
SMCHD1-210ENST00000583800 C11orf86A6NJI1 115 aa4.35□□□□□ -1.71
SMCHD1-210ENST00000583800 LINC00158P58513 81 aa4.35□□□□□ -1.71
SMCHD1-210ENST00000583800 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
SMCHD1-210ENST00000583800 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 NCR3O14931 201 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 SPINK1P00995 79 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 CXCL6P80162 114 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 TMEM170BQ5T4T1 132 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
SMCHD1-210ENST00000583800 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 SPRR1AP35321 89 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 FABP9Q0Z7S8 132 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 MOBPQ13875 183 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 PMCHL1Q16048 86 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 SFTA2Q6UW10 78 aa4.33□□□□□ -1.72
SMCHD1-210ENST00000583800 ETDCA0A1B0GVM5 59 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 HBDP02042 147 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 S100PP25815 95 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 LINC00483Q53H64 154 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 Q8N377 158 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 NDUFA12Q9UI09 145 aa4.32□□□□□ -1.72
SMCHD1-210ENST00000583800 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
SMCHD1-210ENST00000583800 FAM19A2Q8N3H0 131 aa4.31□□□□□ -1.72
SMCHD1-210ENST00000583800 KCNQ1DNQ9H478 68 aa4.31□□□□□ -1.72
SMCHD1-210ENST00000583800 TRBV10-3A0A0K0K1G6 114 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 ERC2-IT1O76042 136 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 CFC1BP0CG36 223 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 CFC1P0CG37 223 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 COX19Q49B96 90 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 MIR7-3HGQ8N6C7 128 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 C18orf32Q8TCD1 76 aa4.3□□□□□ -1.72
SMCHD1-210ENST00000583800 SLC25A20O43772 301 aa4.29□□□□□ -1.72
SMCHD1-210ENST00000583800 LINC00614P0C842 121 aa4.29□□□□□ -1.72
SMCHD1-210ENST00000583800 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
SMCHD1-210ENST00000583800 Q6ZVH6 145 aa4.29□□□□□ -1.72
SMCHD1-210ENST00000583800 MT1HP80294 61 aa4.28□□□□□ -1.72
SMCHD1-210ENST00000583800 CD164Q04900 197 aa4.28□□□□□ -1.72
SMCHD1-210ENST00000583800 CLLU1Q5K131 121 aa4.28□□□□□ -1.72
SMCHD1-210ENST00000583800 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
SMCHD1-210ENST00000583800 SEC11CQ9BY50 192 aa4.28□□□□□ -1.72
SMCHD1-210ENST00000583800 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
SMCHD1-210ENST00000583800 C9orf153Q5TBE3 101 aa4.27□□□□□ -1.73
SMCHD1-210ENST00000583800 Q9BRP9 147 aa4.27□□□□□ -1.73
SMCHD1-210ENST00000583800 TRAPPC1Q9Y5R8 145 aa4.27□□□□□ -1.73
SMCHD1-210ENST00000583800 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
SMCHD1-210ENST00000583800 DDTP30046 118 aa4.26□□□□□ -1.73
SMCHD1-210ENST00000583800 S100A12P80511 92 aa4.26□□□□□ -1.73
SMCHD1-210ENST00000583800 RPS10P5Q9NQ39 176 aa4.26□□□□□ -1.73
SMCHD1-210ENST00000583800 TRAV12-1A0A0B4J245 112 aa4.25□□□□□ -1.73
SMCHD1-210ENST00000583800 SERF1AO75920 110 aa4.25□□□□□ -1.73
SMCHD1-210ENST00000583800 PCOTHQ58A44 107 aa4.25□□□□□ -1.73
SMCHD1-210ENST00000583800 Q6ZRX8 168 aa4.25□□□□□ -1.73
SMCHD1-210ENST00000583800 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
SMCHD1-210ENST00000583800 RHEBQ15382 184 aa4.24□□□□□ -1.73
SMCHD1-210ENST00000583800 ST20-AS1Q8NBB2 130 aa4.24□□□□□ -1.73
SMCHD1-210ENST00000583800 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
SMCHD1-210ENST00000583800 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
SMCHD1-210ENST00000583800 MYMXA0A1B0GTQ4 84 aa4.23□□□□□ -1.73
SMCHD1-210ENST00000583800 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
SMCHD1-210ENST00000583800 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
SMCHD1-210ENST00000583800 TRAV23DV6A0A075B6W5 121 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 IFITM2Q01629 132 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 COA6Q5JTJ3 125 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 C10orf91Q5T1B1 145 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 COMMD7Q86VX2 200 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 SPANXB1Q9NS25 103 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-210ENST00000583800 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
SMCHD1-210ENST00000583800 JOSD1Q15040 202 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-210ENST00000583800 CHCHD1Q96BP2 118 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-210ENST00000583800 MIEN1Q9BRT3 115 aa4.21□□□□□ -1.74
SMCHD1-210ENST00000583800 A0A0J9YXY3 114 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 LEPROTO15243 131 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 ZNF73O43830 326 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 NPC2P61916 151 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 LIMD2Q9BT23 127 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SMCHD1-210ENST00000583800 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms