RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 A0A087WYN8 130 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 LECT2O14960 151 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 CCKP06307 115 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 COX7CP15954 63 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 PFN2P35080 140 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 SMCR5Q8TEV8 140 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 LRP2P98164 4655 aa6.62□□□□□ -1.35
MKS1-212ENST00000583577 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
MKS1-212ENST00000583577 CRYGAP11844 174 aa6.61□□□□□ -1.35
MKS1-212ENST00000583577 C6orf223Q8N319 242 aa6.61□□□□□ -1.35
MKS1-212ENST00000583577 Q8N814 137 aa6.61□□□□□ -1.35
MKS1-212ENST00000583577 Q9HAA7 133 aa6.61□□□□□ -1.35
MKS1-212ENST00000583577 IGKV3OR2-268A0A0C4DH90 116 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 F8WDY8 70 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 RPL18AQ02543 176 aaKnown RBP6.6□□□□□ -1.35
MKS1-212ENST00000583577 KIAA0087Q14695 138 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 ESRGQ1W209 222 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 LINC00588Q9Y4M8 146 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
MKS1-212ENST00000583577 SMR3BP02814 79 aaPredicted RBP6.59□□□□□ -1.35
MKS1-212ENST00000583577 XCL1P47992 114 aa6.59□□□□□ -1.35
MKS1-212ENST00000583577 LELP1Q5T871 98 aa6.59□□□□□ -1.35
MKS1-212ENST00000583577 LYPD5Q6UWN5 251 aa6.59□□□□□ -1.35
MKS1-212ENST00000583577 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
MKS1-212ENST00000583577 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
MKS1-212ENST00000583577 REG3AQ06141 175 aa6.58□□□□□ -1.36
MKS1-212ENST00000583577 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
MKS1-212ENST00000583577 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 hADV29S1A0JD25 119 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
MKS1-212ENST00000583577 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 LINC00575Q6W349 94 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 UBL5Q9BZL1 73 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 PRR34Q9NV39 138 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
MKS1-212ENST00000583577 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
MKS1-212ENST00000583577 ANGP03950 147 aaKnown RBP6.55□□□□□ -1.36
MKS1-212ENST00000583577 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
MKS1-212ENST00000583577 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
MKS1-212ENST00000583577 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
MKS1-212ENST00000583577 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.36
MKS1-212ENST00000583577 TMEM258P61165 79 aa6.54□□□□□ -1.36
MKS1-212ENST00000583577 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
MKS1-212ENST00000583577 RBM3P98179 157 aaKnown RBP6.53□□□□□ -1.36
MKS1-212ENST00000583577 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
MKS1-212ENST00000583577 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
MKS1-212ENST00000583577 NCR3O14931 201 aa6.52□□□□□ -1.37
MKS1-212ENST00000583577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
MKS1-212ENST00000583577 WFDC10BQ8IUB3 73 aa6.52□□□□□ -1.37
MKS1-212ENST00000583577 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
MKS1-212ENST00000583577 J3KT08 172 aa6.51□□□□□ -1.37
MKS1-212ENST00000583577 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
MKS1-212ENST00000583577 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
MKS1-212ENST00000583577 CXCL6P80162 114 aa6.5□□□□□ -1.37
MKS1-212ENST00000583577 HAMPP81172 84 aa6.5□□□□□ -1.37
MKS1-212ENST00000583577 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
MKS1-212ENST00000583577 A0A1B0GW54 56 aa6.49□□□□□ -1.37
MKS1-212ENST00000583577 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
MKS1-212ENST00000583577 Q6ZQT0 140 aa6.49□□□□□ -1.37
MKS1-212ENST00000583577 DSCR8Q96T75 97 aa6.49□□□□□ -1.37
MKS1-212ENST00000583577 SLPIP03973 132 aa6.48□□□□□ -1.37
MKS1-212ENST00000583577 C9orf129Q5T035 196 aaKnown RBP6.48□□□□□ -1.37
MKS1-212ENST00000583577 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
MKS1-212ENST00000583577 TRAV23DV6A0A075B6W5 121 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 LOC107984640A0A0U1RRK4 108 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 KRTAP10-1P60331 282 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 CLPSL2Q6UWE3 100 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
MKS1-212ENST00000583577 M0R378 163 aa6.46□□□□□ -1.38
MKS1-212ENST00000583577 LAMTOR3Q9UHA4 124 aa6.46□□□□□ -1.38
MKS1-212ENST00000583577 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
MKS1-212ENST00000583577 COX7BP24311 80 aa6.45□□□□□ -1.38
MKS1-212ENST00000583577 ELOF1P60002 83 aaKnown RBP6.45□□□□□ -1.38
MKS1-212ENST00000583577 UNQ6190/PRO20217Q6UXQ8 127 aa6.45□□□□□ -1.38
MKS1-212ENST00000583577 TNXBP22105 4242 aa6.45□□□□□ -1.38
MKS1-212ENST00000583577 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
MKS1-212ENST00000583577 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
MKS1-212ENST00000583577 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
MKS1-212ENST00000583577 ZNF73O43830 326 aaPredicted RBP6.44□□□□□ -1.38
MKS1-212ENST00000583577 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
MKS1-212ENST00000583577 TRBV7-4A0A0J9YYF1 115 aa6.43□□□□□ -1.38
MKS1-212ENST00000583577 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
MKS1-212ENST00000583577 Q8N3U1 123 aa6.43□□□□□ -1.38
MKS1-212ENST00000583577 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
MKS1-212ENST00000583577 PSCAO43653 123 aa6.42□□□□□ -1.38
MKS1-212ENST00000583577 NDUFC1O43677 76 aa6.42□□□□□ -1.38
MKS1-212ENST00000583577 Q6ZQY7 126 aa6.42□□□□□ -1.38
MKS1-212ENST00000583577 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
MKS1-212ENST00000583577 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
MKS1-212ENST00000583577 VPREB1P12018 145 aa6.41□□□□□ -1.38
MKS1-212ENST00000583577 LINC01547P58512 204 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms