RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 IFITM1P13164 125 aa14.78□□□□□ -0.04
TSEN54-209ENST00000583454 COPS9Q8WXC6 57 aa14.76□□□□□ -0.05
TSEN54-209ENST00000583454 ETDCA0A1B0GVM5 59 aa14.75□□□□□ -0.05
TSEN54-209ENST00000583454 LINC00518Q8N0U6 118 aa14.74□□□□□ -0.05
TSEN54-209ENST00000583454 HIGD2AQ9BW72 106 aa14.74□□□□□ -0.05
TSEN54-209ENST00000583454 RPL13AP40429 203 aaKnown RBP14.73□□□□□ -0.05
TSEN54-209ENST00000583454 JOSD1Q15040 202 aaPredicted RBP14.73□□□□□ -0.05
TSEN54-209ENST00000583454 TRAV23DV6A0A075B6W5 121 aa14.72□□□□□ -0.05
TSEN54-209ENST00000583454 B5MCH6 92 aa14.72□□□□□ -0.05
TSEN54-209ENST00000583454 MUSTN1Q8IVN3 82 aa14.72□□□□□ -0.05
TSEN54-209ENST00000583454 A0A087X002 238 aa14.7□□□□□ -0.06
TSEN54-209ENST00000583454 CBY1Q9Y3M2 126 aa14.7□□□□□ -0.06
TSEN54-209ENST00000583454 COX8AP10176 69 aa14.69□□□□□ -0.06
TSEN54-209ENST00000583454 FAM229BQ4G0N7 80 aa14.69□□□□□ -0.06
TSEN54-209ENST00000583454 OR13C6PQ8NH95 151 aa14.69□□□□□ -0.06
TSEN54-209ENST00000583454 ANAPC11Q9NYG5 84 aa14.69□□□□□ -0.06
TSEN54-209ENST00000583454 TMA7Q9Y2S6 64 aaKnown RBP14.69□□□□□ -0.06
TSEN54-209ENST00000583454 ZNF73O43830 326 aaPredicted RBP14.68□□□□□ -0.06
TSEN54-209ENST00000583454 CRYGAP11844 174 aa14.68□□□□□ -0.06
TSEN54-209ENST00000583454 SMCR5Q8TEV8 140 aa14.68□□□□□ -0.06
TSEN54-209ENST00000583454 DLEU1O43261 78 aa14.66□□□□□ -0.06
TSEN54-209ENST00000583454 Q6ZRX8 168 aa14.66□□□□□ -0.06
TSEN54-209ENST00000583454 SPRR4Q96PI1 79 aa14.64□□□□□ -0.07
TSEN54-209ENST00000583454 Q9BRP9 147 aa14.64□□□□□ -0.07
TSEN54-209ENST00000583454 VAMP8Q9BV40 100 aa14.63□□□□□ -0.07
TSEN54-209ENST00000583454 PAM16Q9Y3D7 125 aa14.63□□□□□ -0.07
TSEN54-209ENST00000583454 KRTAP13-2Q52LG2 175 aa14.62□□□□□ -0.07
TSEN54-209ENST00000583454 SPATA45Q537H7 98 aa14.62□□□□□ -0.07
TSEN54-209ENST00000583454 ZNF706Q9Y5V0 76 aaPredicted RBP14.62□□□□□ -0.07
TSEN54-209ENST00000583454 ERC2-IT1O76042 136 aa14.6□□□□□ -0.07
TSEN54-209ENST00000583454 C14orf144Q96I85 54 aa14.6□□□□□ -0.07
TSEN54-209ENST00000583454 PYY3Q5JQD4 70 aa14.59□□□□□ -0.07
TSEN54-209ENST00000583454 TYMSOSQ8TAI1 123 aa14.59□□□□□ -0.07
TSEN54-209ENST00000583454 MUC2Q02817 5179 aa14.58□□□□□ -0.07
TSEN54-209ENST00000583454 HINT1P49773 126 aaPredicted RBP14.58□□□□□ -0.08
TSEN54-209ENST00000583454 TRAV13-2A0A0B4J235 113 aa14.56□□□□□ -0.08
TSEN54-209ENST00000583454 A6NDN8 102 aa14.56□□□□□ -0.08
TSEN54-209ENST00000583454 A4D1N5 150 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 C6orf99Q4VX62 202 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 LINC00483Q53H64 154 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 SLC25A34Q6PIV7 304 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 HIST1H4GQ99525 98 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 HIGD1BQ9P298 99 aa14.54□□□□□ -0.08
TSEN54-209ENST00000583454 TRBV7-6A0A0J9YX20 115 aa14.52□□□□□ -0.09
TSEN54-209ENST00000583454 COX7BP24311 80 aa14.51□□□□□ -0.09
TSEN54-209ENST00000583454 ELOF1P60002 83 aaKnown RBP14.51□□□□□ -0.09
TSEN54-209ENST00000583454 C3orf22Q8N5N4 141 aa14.5□□□□□ -0.09
TSEN54-209ENST00000583454 GAGE2AQ6NT46 116 aa14.49□□□□□ -0.09
TSEN54-209ENST00000583454 C2orf91Q6ZV80 131 aa14.49□□□□□ -0.09
TSEN54-209ENST00000583454 DHRS4-AS1Q9P1J3 65 aa14.49□□□□□ -0.09
TSEN54-209ENST00000583454 SMIM11BQ8TCY0 68 aa14.46□□□□□ -0.09
TSEN54-209ENST00000583454 A0A1B0GWB2 263 aa14.44□□□□□ -0.1
TSEN54-209ENST00000583454 PRR4Q16378 134 aa14.44□□□□□ -0.1
TSEN54-209ENST00000583454 ST20-AS1Q8NBB2 130 aa14.44□□□□□ -0.1
TSEN54-209ENST00000583454 LINC00304Q8N9R0 145 aa14.43□□□□□ -0.1
TSEN54-209ENST00000583454 TSPAN13O95857 204 aa14.4□□□□□ -0.1
TSEN54-209ENST00000583454 TAL2Q16559 108 aa14.4□□□□□ -0.1
TSEN54-209ENST00000583454 C12orf57Q99622 126 aa14.4□□□□□ -0.1
TSEN54-209ENST00000583454 SPRR1BP22528 89 aa14.38□□□□□ -0.11
TSEN54-209ENST00000583454 CTAG1AP78358 180 aa14.37□□□□□ -0.11
TSEN54-209ENST00000583454 CFC1BP0CG36 223 aa14.36□□□□□ -0.11
TSEN54-209ENST00000583454 CFC1P0CG37 223 aa14.36□□□□□ -0.11
TSEN54-209ENST00000583454 CEND1Q8N111 149 aa14.35□□□□□ -0.11
TSEN54-209ENST00000583454 IGLV9-49A0A0B4J1Y8 123 aa14.33□□□□□ -0.12
TSEN54-209ENST00000583454 VAMP3Q15836 100 aa14.33□□□□□ -0.12
TSEN54-209ENST00000583454 SPAG11AQ6PDA7 123 aa14.33□□□□□ -0.12
TSEN54-209ENST00000583454 SSBP3-AS1Q7Z2R9 100 aa14.33□□□□□ -0.12
TSEN54-209ENST00000583454 Q8NBF4 154 aa14.33□□□□□ -0.12
TSEN54-209ENST00000583454 A0A0B4J2C4 111 aa14.31□□□□□ -0.12
TSEN54-209ENST00000583454 MOBPQ13875 183 aa14.31□□□□□ -0.12
TSEN54-209ENST00000583454 NHP2Q9NX24 153 aaKnown RBP14.3□□□□□ -0.12
TSEN54-209ENST00000583454 RAB37Q96AX2 223 aa14.29□□□□□ -0.12
TSEN54-209ENST00000583454 UQCR10Q9UDW1 63 aa14.29□□□□□ -0.12
TSEN54-209ENST00000583454 LINC00575Q6W349 94 aa14.28□□□□□ -0.12
TSEN54-209ENST00000583454 IGLV5-48A0A075B6I7 105 aa14.27□□□□□ -0.13
TSEN54-209ENST00000583454 TEX49A0A1B0GTD5 131 aa14.27□□□□□ -0.13
TSEN54-209ENST00000583454 FXYD2P54710 66 aa14.27□□□□□ -0.13
TSEN54-209ENST00000583454 LINC01547P58512 204 aaPredicted RBP14.27□□□□□ -0.13
TSEN54-209ENST00000583454 C4orf48Q5BLP8 95 aa14.27□□□□□ -0.13
TSEN54-209ENST00000583454 TMEM238LA0A1B0GVL6 79 aa14.26□□□□□ -0.13
TSEN54-209ENST00000583454 A6NJY4 79 aa14.26□□□□□ -0.13
TSEN54-209ENST00000583454 HSD52Q0P140 79 aa14.26□□□□□ -0.13
TSEN54-209ENST00000583454 DEFB105AQ8NG35 78 aa14.26□□□□□ -0.13
TSEN54-209ENST00000583454 SLC25A20O43772 301 aa14.25□□□□□ -0.13
TSEN54-209ENST00000583454 BVES-AS1Q5T3Y7 98 aa14.24□□□□□ -0.13
TSEN54-209ENST00000583454 LAMTOR3Q9UHA4 124 aa14.24□□□□□ -0.13
TSEN54-209ENST00000583454 H7C2G1 150 aa14.23□□□□□ -0.13
TSEN54-209ENST00000583454 C9orf153Q5TBE3 101 aa14.23□□□□□ -0.13
TSEN54-209ENST00000583454 MUC17Q685J3 4493 aa14.23□□□□□ -0.13
TSEN54-209ENST00000583454 FAT4Q6V0I7 4981 aa14.22□□□□□ -0.13
TSEN54-209ENST00000583454 SPINK1P00995 79 aa14.22□□□□□ -0.13
TSEN54-209ENST00000583454 PRO1854Q9UHT4 67 aa14.22□□□□□ -0.13
TSEN54-209ENST00000583454 hADV29S1A0JD25 119 aa14.21□□□□□ -0.13
TSEN54-209ENST00000583454 SMIM29Q86T20 159 aa14.21□□□□□ -0.13
TSEN54-209ENST00000583454 Q8N377 158 aa14.19□□□□□ -0.14
TSEN54-209ENST00000583454 SMIM6P0DI80 62 aa14.18□□□□□ -0.14
TSEN54-209ENST00000583454 Q1RN00 199 aa14.17□□□□□ -0.14
TSEN54-209ENST00000583454 RETNLBQ9BQ08 111 aa14.17□□□□□ -0.14
TSEN54-209ENST00000583454 RPS29P62273 56 aaKnown RBP14.16□□□□□ -0.14
TSEN54-209ENST00000583454 Q6ZQY7 126 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms