RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
SS18-219ENST00000581570 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
SS18-219ENST00000581570 C5orf52A6NGY3 159 aa6.71□□□□□ -1.34
SS18-219ENST00000581570 CFC1P0CG37 223 aa6.71□□□□□ -1.34
SS18-219ENST00000581570 S100A7L2Q5SY68 101 aa6.71□□□□□ -1.34
SS18-219ENST00000581570 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
SS18-219ENST00000581570 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 S100PP25815 95 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 COX19Q49B96 90 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 SLC25A34Q6PIV7 304 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 Q6Q795 121 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
SS18-219ENST00000581570 SPANXB1Q9NS25 103 aaPredicted RBP6.7□□□□□ -1.34
SS18-219ENST00000581570 TRAV23DV6A0A075B6W5 121 aa6.69□□□□□ -1.34
SS18-219ENST00000581570 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
SS18-219ENST00000581570 SPRR1BP22528 89 aa6.69□□□□□ -1.34
SS18-219ENST00000581570 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
SS18-219ENST00000581570 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
SS18-219ENST00000581570 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
SS18-219ENST00000581570 LAMTOR3Q9UHA4 124 aa6.68□□□□□ -1.34
SS18-219ENST00000581570 CD164Q04900 197 aa6.67□□□□□ -1.34
SS18-219ENST00000581570 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
SS18-219ENST00000581570 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
SS18-219ENST00000581570 TRAV12-1A0A0B4J245 112 aa6.66□□□□□ -1.34
SS18-219ENST00000581570 H7C2G1 150 aa6.66□□□□□ -1.34
SS18-219ENST00000581570 HINT1P49773 126 aaPredicted RBP6.66□□□□□ -1.34
SS18-219ENST00000581570 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
SS18-219ENST00000581570 MIEN1Q9BRT3 115 aa6.66□□□□□ -1.34
SS18-219ENST00000581570 NDUFC2O95298 119 aa6.65□□□□□ -1.34
SS18-219ENST00000581570 Q5XG85 94 aa6.64□□□□□ -1.35
SS18-219ENST00000581570 PRO1933Q9H354 126 aa6.64□□□□□ -1.35
SS18-219ENST00000581570 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
SS18-219ENST00000581570 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
SS18-219ENST00000581570 IFI27L1Q96BM0 104 aa6.63□□□□□ -1.35
SS18-219ENST00000581570 COMMD7Q86VX2 200 aa6.62□□□□□ -1.35
SS18-219ENST00000581570 RPS10P5Q9NQ39 176 aa6.62□□□□□ -1.35
SS18-219ENST00000581570 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
SS18-219ENST00000581570 Q1RN00 199 aa6.61□□□□□ -1.35
SS18-219ENST00000581570 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
SS18-219ENST00000581570 CBY1Q9Y3M2 126 aa6.61□□□□□ -1.35
SS18-219ENST00000581570 IFITM2Q01629 132 aa6.6□□□□□ -1.35
SS18-219ENST00000581570 TAL2Q16559 108 aa6.6□□□□□ -1.35
SS18-219ENST00000581570 SMIM29Q86T20 159 aa6.6□□□□□ -1.35
SS18-219ENST00000581570 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
SS18-219ENST00000581570 TMEM218A2RU14 115 aa6.59□□□□□ -1.35
SS18-219ENST00000581570 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
SS18-219ENST00000581570 LEPROTO15243 131 aa6.59□□□□□ -1.35
SS18-219ENST00000581570 AKR1D1P51857 326 aa6.59□□□□□ -1.35
SS18-219ENST00000581570 DEFB105AQ8NG35 78 aa6.59□□□□□ -1.35
SS18-219ENST00000581570 NPC2P61916 151 aa6.58□□□□□ -1.36
SS18-219ENST00000581570 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
SS18-219ENST00000581570 J3QQQ9 107 aa6.56□□□□□ -1.36
SS18-219ENST00000581570 RHEBQ15382 184 aa6.56□□□□□ -1.36
SS18-219ENST00000581570 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
SS18-219ENST00000581570 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
SS18-219ENST00000581570 TEX49A0A1B0GTD5 131 aa6.55□□□□□ -1.36
SS18-219ENST00000581570 C20orf202A1L168 122 aa6.55□□□□□ -1.36
SS18-219ENST00000581570 NMUP48645 174 aa6.55□□□□□ -1.36
SS18-219ENST00000581570 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
SS18-219ENST00000581570 H0Y8G0 127 aa6.54□□□□□ -1.36
SS18-219ENST00000581570 UQCC3Q6UW78 93 aa6.54□□□□□ -1.36
SS18-219ENST00000581570 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
SS18-219ENST00000581570 TCL1BO95988 128 aa6.53□□□□□ -1.36
SS18-219ENST00000581570 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
SS18-219ENST00000581570 COX7BP24311 80 aa6.53□□□□□ -1.36
SS18-219ENST00000581570 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
SS18-219ENST00000581570 MT2AP02795 61 aa6.52□□□□□ -1.37
SS18-219ENST00000581570 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
SS18-219ENST00000581570 CLLU1Q5K131 121 aa6.52□□□□□ -1.37
SS18-219ENST00000581570 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
SS18-219ENST00000581570 HERVK_113P61574 105 aa6.51□□□□□ -1.37
SS18-219ENST00000581570 C10orf91Q5T1B1 145 aa6.51□□□□□ -1.37
SS18-219ENST00000581570 Q75L30 129 aa6.51□□□□□ -1.37
SS18-219ENST00000581570 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
SS18-219ENST00000581570 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
SS18-219ENST00000581570 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
SS18-219ENST00000581570 PLNP26678 52 aa6.49□□□□□ -1.37
SS18-219ENST00000581570 SPANXCQ9NY87 97 aa6.49□□□□□ -1.37
SS18-219ENST00000581570 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
SS18-219ENST00000581570 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
SS18-219ENST00000581570 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
SS18-219ENST00000581570 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 HSBP1O75506 76 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 MT1FP04733 61 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
SS18-219ENST00000581570 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.37
SS18-219ENST00000581570 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
SS18-219ENST00000581570 DPM2O94777 84 aa6.46□□□□□ -1.38
SS18-219ENST00000581570 LINC00846Q9NV44 126 aa6.46□□□□□ -1.38
SS18-219ENST00000581570 PMCHL2Q9BQD1 86 aa6.45□□□□□ -1.38
SS18-219ENST00000581570 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
SS18-219ENST00000581570 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SS18-219ENST00000581570 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
SS18-219ENST00000581570 IGKCP01834 107 aa6.43□□□□□ -1.38
SS18-219ENST00000581570 LINC00518Q8N0U6 118 aa6.43□□□□□ -1.38
SS18-219ENST00000581570 LITAFQ99732 161 aa6.42□□□□□ -1.38
SS18-219ENST00000581570 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms