RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
SMG8-204ENST00000580498 PPDPFQ9H3Y8 114 aa11.7□□□□□ -0.54
SMG8-204ENST00000580498 SPANXCQ9NY87 97 aa11.7□□□□□ -0.54
SMG8-204ENST00000580498 GAGE2AQ6NT46 116 aa11.69□□□□□ -0.54
SMG8-204ENST00000580498 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
SMG8-204ENST00000580498 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
SMG8-204ENST00000580498 ZNF73O43830 326 aaPredicted RBP11.67□□□□□ -0.54
SMG8-204ENST00000580498 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
SMG8-204ENST00000580498 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
SMG8-204ENST00000580498 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
SMG8-204ENST00000580498 SOSTDC1Q6X4U4 206 aa11.65□□□□□ -0.54
SMG8-204ENST00000580498 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
SMG8-204ENST00000580498 RETNLBQ9BQ08 111 aa11.65□□□□□ -0.54
SMG8-204ENST00000580498 Q8NBF4 154 aa11.64□□□□□ -0.55
SMG8-204ENST00000580498 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
SMG8-204ENST00000580498 IGLV7-46A0A075B6I9 117 aa11.62□□□□□ -0.55
SMG8-204ENST00000580498 SPINK1P00995 79 aa11.62□□□□□ -0.55
SMG8-204ENST00000580498 CDIP1Q9H305 208 aa11.62□□□□□ -0.55
SMG8-204ENST00000580498 IGLV9-49A0A0B4J1Y8 123 aa11.61□□□□□ -0.55
SMG8-204ENST00000580498 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
SMG8-204ENST00000580498 SSBP3-AS1Q7Z2R9 100 aa11.61□□□□□ -0.55
SMG8-204ENST00000580498 Q9BRP9 147 aa11.61□□□□□ -0.55
SMG8-204ENST00000580498 LITAFQ99732 161 aa11.6□□□□□ -0.55
SMG8-204ENST00000580498 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
SMG8-204ENST00000580498 ERC2-IT1O76042 136 aa11.59□□□□□ -0.55
SMG8-204ENST00000580498 MOBPQ13875 183 aa11.59□□□□□ -0.55
SMG8-204ENST00000580498 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
SMG8-204ENST00000580498 LPAP08519 4548 aa11.59□□□□□ -0.55
SMG8-204ENST00000580498 S100A2P29034 98 aa11.58□□□□□ -0.56
SMG8-204ENST00000580498 SNRPEP62304 92 aaKnown RBP11.58□□□□□ -0.56
SMG8-204ENST00000580498 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
SMG8-204ENST00000580498 Q6ZVH6 145 aa11.58□□□□□ -0.56
SMG8-204ENST00000580498 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
SMG8-204ENST00000580498 DHRS4-AS1Q9P1J3 65 aa11.58□□□□□ -0.56
SMG8-204ENST00000580498 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SMG8-204ENST00000580498 IFITM1P13164 125 aa11.57□□□□□ -0.56
SMG8-204ENST00000580498 C9orf153Q5TBE3 101 aa11.57□□□□□ -0.56
SMG8-204ENST00000580498 S100A1P23297 94 aa11.56□□□□□ -0.56
SMG8-204ENST00000580498 TTTY13Q9BZ97 58 aa11.56□□□□□ -0.56
SMG8-204ENST00000580498 HSBP1L1C9JCN9 74 aa11.54□□□□□ -0.56
SMG8-204ENST00000580498 ATOH7Q8N100 152 aa11.54□□□□□ -0.56
SMG8-204ENST00000580498 RPS29P62273 56 aaKnown RBP11.53□□□□□ -0.56
SMG8-204ENST00000580498 RNF213Q63HN8 5207 aa11.52□□□□□ -0.56
SMG8-204ENST00000580498 S100A6P06703 90 aa11.52□□□□□ -0.57
SMG8-204ENST00000580498 COX7BP24311 80 aa11.52□□□□□ -0.57
SMG8-204ENST00000580498 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
SMG8-204ENST00000580498 A6NDN8 102 aa11.5□□□□□ -0.57
SMG8-204ENST00000580498 C6orf99Q4VX62 202 aa11.49□□□□□ -0.57
SMG8-204ENST00000580498 LAMTOR3Q9UHA4 124 aa11.49□□□□□ -0.57
SMG8-204ENST00000580498 SLC25A20O43772 301 aa11.48□□□□□ -0.57
SMG8-204ENST00000580498 ELOF1P60002 83 aaKnown RBP11.48□□□□□ -0.57
SMG8-204ENST00000580498 TRBV7-6A0A0J9YX20 115 aa11.47□□□□□ -0.57
SMG8-204ENST00000580498 ST20-AS1Q8NBB2 130 aa11.47□□□□□ -0.57
SMG8-204ENST00000580498 TAL2Q16559 108 aa11.46□□□□□ -0.57
SMG8-204ENST00000580498 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
SMG8-204ENST00000580498 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
SMG8-204ENST00000580498 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
SMG8-204ENST00000580498 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
SMG8-204ENST00000580498 HIST3H2BBQ8N257 126 aa11.44□□□□□ -0.58
SMG8-204ENST00000580498 A4D1N5 150 aa11.43□□□□□ -0.58
SMG8-204ENST00000580498 SPRR1BP22528 89 aa11.43□□□□□ -0.58
SMG8-204ENST00000580498 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
SMG8-204ENST00000580498 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
SMG8-204ENST00000580498 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
SMG8-204ENST00000580498 TEX49A0A1B0GTD5 131 aa11.4□□□□□ -0.58
SMG8-204ENST00000580498 Q8N377 158 aa11.4□□□□□ -0.58
SMG8-204ENST00000580498 DEFB105AQ8NG35 78 aa11.4□□□□□ -0.58
SMG8-204ENST00000580498 VAMP3Q15836 100 aa11.39□□□□□ -0.59
SMG8-204ENST00000580498 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
SMG8-204ENST00000580498 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
SMG8-204ENST00000580498 Q1RN00 199 aa11.34□□□□□ -0.59
SMG8-204ENST00000580498 KRTAP13-3Q3SY46 172 aa11.34□□□□□ -0.59
SMG8-204ENST00000580498 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
SMG8-204ENST00000580498 SMIM11BQ8TCY0 68 aa11.31□□□□□ -0.6
SMG8-204ENST00000580498 H7C2G1 150 aa11.3□□□□□ -0.6
SMG8-204ENST00000580498 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
SMG8-204ENST00000580498 CD164Q04900 197 aa11.3□□□□□ -0.6
SMG8-204ENST00000580498 F8WEM9 126 aa11.28□□□□□ -0.6
SMG8-204ENST00000580498 HIST1H4GQ99525 98 aa11.28□□□□□ -0.6
SMG8-204ENST00000580498 IGLV5-48A0A075B6I7 105 aa11.27□□□□□ -0.61
SMG8-204ENST00000580498 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
SMG8-204ENST00000580498 COX8AP10176 69 aa11.22□□□□□ -0.61
SMG8-204ENST00000580498 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
SMG8-204ENST00000580498 hADV29S1A0JD25 119 aa11.21□□□□□ -0.61
SMG8-204ENST00000580498 SNCGO76070 127 aa11.21□□□□□ -0.61
SMG8-204ENST00000580498 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
SMG8-204ENST00000580498 DLEU1O43261 78 aa11.19□□□□□ -0.62
SMG8-204ENST00000580498 LINC01547P58512 204 aaPredicted RBP11.19□□□□□ -0.62
SMG8-204ENST00000580498 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
SMG8-204ENST00000580498 MUC2Q02817 5179 aa11.18□□□□□ -0.62
SMG8-204ENST00000580498 TCL1BO95988 128 aa11.17□□□□□ -0.62
SMG8-204ENST00000580498 Q5XG85 94 aa11.16□□□□□ -0.62
SMG8-204ENST00000580498 Q6ZQY7 126 aa11.16□□□□□ -0.62
SMG8-204ENST00000580498 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
SMG8-204ENST00000580498 C12orf57Q99622 126 aa11.16□□□□□ -0.62
SMG8-204ENST00000580498 XP32Q5T750 250 aa11.15□□□□□ -0.62
SMG8-204ENST00000580498 VAMP8Q9BV40 100 aa11.15□□□□□ -0.62
SMG8-204ENST00000580498 Q6JHZ5 121 aa11.14□□□□□ -0.63
SMG8-204ENST00000580498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
SMG8-204ENST00000580498 SPATA45Q537H7 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms