RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ZNF706Q9Y5V0 76 aaPredicted RBP14.11□□□□□ -0.15
LIMD2-207ENST00000579329 SPANXDQ9BXN6 97 aa14.1□□□□□ -0.15
LIMD2-207ENST00000579329 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
LIMD2-207ENST00000579329 B5MCH6 92 aa14.09□□□□□ -0.15
LIMD2-207ENST00000579329 KRTAP13-2Q52LG2 175 aa14.09□□□□□ -0.15
LIMD2-207ENST00000579329 PCP2Q8IVA1 136 aa14.08□□□□□ -0.16
LIMD2-207ENST00000579329 SMCR5Q8TEV8 140 aa14.08□□□□□ -0.16
LIMD2-207ENST00000579329 SPRR4Q96PI1 79 aa14.08□□□□□ -0.16
LIMD2-207ENST00000579329 CBY1Q9Y3M2 126 aa14.08□□□□□ -0.16
LIMD2-207ENST00000579329 HSBP1L1C9JCN9 74 aa14.06□□□□□ -0.16
LIMD2-207ENST00000579329 Q6ZRX8 168 aa14.05□□□□□ -0.16
LIMD2-207ENST00000579329 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
LIMD2-207ENST00000579329 C5orf52A6NGY3 159 aa14.04□□□□□ -0.16
LIMD2-207ENST00000579329 ZNF73O43830 326 aaPredicted RBP14.04□□□□□ -0.16
LIMD2-207ENST00000579329 Q6ZVH6 145 aa14.04□□□□□ -0.16
LIMD2-207ENST00000579329 OR13C6PQ8NH95 151 aa14.04□□□□□ -0.16
LIMD2-207ENST00000579329 IFITM1P13164 125 aa14.03□□□□□ -0.16
LIMD2-207ENST00000579329 LINC00518Q8N0U6 118 aa14.03□□□□□ -0.16
LIMD2-207ENST00000579329 PPDPFQ9H3Y8 114 aa14.02□□□□□ -0.17
LIMD2-207ENST00000579329 JOSD1Q15040 202 aaPredicted RBP14.01□□□□□ -0.17
LIMD2-207ENST00000579329 Q9BRP9 147 aa14□□□□□ -0.17
LIMD2-207ENST00000579329 SCGB1D1O95968 90 aa13.99□□□□□ -0.17
LIMD2-207ENST00000579329 HINT1P49773 126 aaPredicted RBP13.99□□□□□ -0.17
LIMD2-207ENST00000579329 TSPAN13O95857 204 aa13.98□□□□□ -0.17
LIMD2-207ENST00000579329 C3orf22Q8N5N4 141 aa13.98□□□□□ -0.17
LIMD2-207ENST00000579329 LINC00304Q8N9R0 145 aa13.98□□□□□ -0.17
LIMD2-207ENST00000579329 ERC2-IT1O76042 136 aa13.97□□□□□ -0.17
LIMD2-207ENST00000579329 MUSTN1Q8IVN3 82 aa13.96□□□□□ -0.17
LIMD2-207ENST00000579329 LINC00483Q53H64 154 aa13.95□□□□□ -0.18
LIMD2-207ENST00000579329 GAGE2AQ6NT46 116 aa13.94□□□□□ -0.18
LIMD2-207ENST00000579329 PRR4Q16378 134 aa13.9□□□□□ -0.18
LIMD2-207ENST00000579329 LPAP08519 4548 aa13.9□□□□□ -0.18
LIMD2-207ENST00000579329 A6NDN8 102 aa13.88□□□□□ -0.19
LIMD2-207ENST00000579329 CTAG1AP78358 180 aa13.88□□□□□ -0.19
LIMD2-207ENST00000579329 C6orf99Q4VX62 202 aa13.88□□□□□ -0.19
LIMD2-207ENST00000579329 DHRS4-AS1Q9P1J3 65 aa13.87□□□□□ -0.19
LIMD2-207ENST00000579329 COX7BP24311 80 aa13.86□□□□□ -0.19
LIMD2-207ENST00000579329 ELOF1P60002 83 aaKnown RBP13.86□□□□□ -0.19
LIMD2-207ENST00000579329 TRAV13-2A0A0B4J235 113 aa13.85□□□□□ -0.19
LIMD2-207ENST00000579329 SPAG11AQ6PDA7 123 aa13.85□□□□□ -0.19
LIMD2-207ENST00000579329 COX8AP10176 69 aa13.83□□□□□ -0.2
LIMD2-207ENST00000579329 ST20-AS1Q8NBB2 130 aa13.83□□□□□ -0.2
LIMD2-207ENST00000579329 Q8NBF4 154 aa13.83□□□□□ -0.2
LIMD2-207ENST00000579329 TRBV7-6A0A0J9YX20 115 aa13.82□□□□□ -0.2
LIMD2-207ENST00000579329 IGLV9-49A0A0B4J1Y8 123 aa13.81□□□□□ -0.2
LIMD2-207ENST00000579329 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
LIMD2-207ENST00000579329 MOBPQ13875 183 aa13.8□□□□□ -0.2
LIMD2-207ENST00000579329 A0A1B0GWB2 263 aa13.79□□□□□ -0.2
LIMD2-207ENST00000579329 DLEU1O43261 78 aa13.79□□□□□ -0.2
LIMD2-207ENST00000579329 A4D1N5 150 aa13.78□□□□□ -0.2
LIMD2-207ENST00000579329 SSBP3-AS1Q7Z2R9 100 aa13.78□□□□□ -0.2
LIMD2-207ENST00000579329 PAM16Q9Y3D7 125 aa13.77□□□□□ -0.21
LIMD2-207ENST00000579329 SPATA45Q537H7 98 aa13.76□□□□□ -0.21
LIMD2-207ENST00000579329 HIST1H4GQ99525 98 aa13.76□□□□□ -0.21
LIMD2-207ENST00000579329 RETNLBQ9BQ08 111 aa13.76□□□□□ -0.21
LIMD2-207ENST00000579329 VAMP8Q9BV40 100 aa13.76□□□□□ -0.21
LIMD2-207ENST00000579329 SPRR1BP22528 89 aa13.75□□□□□ -0.21
LIMD2-207ENST00000579329 SMIM11BQ8TCY0 68 aa13.75□□□□□ -0.21
LIMD2-207ENST00000579329 SLC25A34Q6PIV7 304 aa13.74□□□□□ -0.21
LIMD2-207ENST00000579329 C9orf153Q5TBE3 101 aa13.73□□□□□ -0.21
LIMD2-207ENST00000579329 C14orf144Q96I85 54 aa13.73□□□□□ -0.21
LIMD2-207ENST00000579329 SPINK1P00995 79 aa13.72□□□□□ -0.21
LIMD2-207ENST00000579329 TAL2Q16559 108 aa13.69□□□□□ -0.22
LIMD2-207ENST00000579329 NHP2Q9NX24 153 aaKnown RBP13.68□□□□□ -0.22
LIMD2-207ENST00000579329 HIGD1BQ9P298 99 aa13.68□□□□□ -0.22
LIMD2-207ENST00000579329 LAMTOR3Q9UHA4 124 aa13.68□□□□□ -0.22
LIMD2-207ENST00000579329 TMA7Q9Y2S6 64 aaKnown RBP13.67□□□□□ -0.22
LIMD2-207ENST00000579329 VAMP3Q15836 100 aa13.66□□□□□ -0.22
LIMD2-207ENST00000579329 DEFB105AQ8NG35 78 aa13.66□□□□□ -0.22
LIMD2-207ENST00000579329 C12orf57Q99622 126 aa13.66□□□□□ -0.22
LIMD2-207ENST00000579329 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
LIMD2-207ENST00000579329 RPS29P62273 56 aaKnown RBP13.65□□□□□ -0.22
LIMD2-207ENST00000579329 IGLV7-46A0A075B6I9 117 aa13.64□□□□□ -0.23
LIMD2-207ENST00000579329 SLC25A20O43772 301 aa13.62□□□□□ -0.23
LIMD2-207ENST00000579329 PYY3Q5JQD4 70 aa13.62□□□□□ -0.23
LIMD2-207ENST00000579329 C2orf91Q6ZV80 131 aa13.62□□□□□ -0.23
LIMD2-207ENST00000579329 MUC2Q02817 5179 aa13.62□□□□□ -0.23
LIMD2-207ENST00000579329 IGLV5-48A0A075B6I7 105 aa13.61□□□□□ -0.23
LIMD2-207ENST00000579329 FP248Q71RG6 208 aaPredicted RBP13.61□□□□□ -0.23
LIMD2-207ENST00000579329 Q1RN00 199 aa13.6□□□□□ -0.23
LIMD2-207ENST00000579329 LINC01547P58512 204 aaPredicted RBP13.59□□□□□ -0.23
LIMD2-207ENST00000579329 TPRXLQ17RH7 258 aa13.58□□□□□ -0.24
LIMD2-207ENST00000579329 LINC00575Q6W349 94 aa13.58□□□□□ -0.24
LIMD2-207ENST00000579329 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
LIMD2-207ENST00000579329 CFC1P0CG37 223 aa13.56□□□□□ -0.24
LIMD2-207ENST00000579329 SMIM29Q86T20 159 aa13.56□□□□□ -0.24
LIMD2-207ENST00000579329 Q8N377 158 aa13.56□□□□□ -0.24
LIMD2-207ENST00000579329 RAB37Q96AX2 223 aa13.56□□□□□ -0.24
LIMD2-207ENST00000579329 BVES-AS1Q5T3Y7 98 aa13.55□□□□□ -0.24
LIMD2-207ENST00000579329 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
LIMD2-207ENST00000579329 KRTAP9-2Q9BYQ4 174 aa13.54□□□□□ -0.24
LIMD2-207ENST00000579329 hADV29S1A0JD25 119 aa13.53□□□□□ -0.24
LIMD2-207ENST00000579329 CEND1Q8N111 149 aa13.53□□□□□ -0.24
LIMD2-207ENST00000579329 H7C2G1 150 aa13.52□□□□□ -0.25
LIMD2-207ENST00000579329 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
LIMD2-207ENST00000579329 CDIP1Q9H305 208 aa13.51□□□□□ -0.25
LIMD2-207ENST00000579329 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
LIMD2-207ENST00000579329 A6NJY4 79 aa13.5□□□□□ -0.25
LIMD2-207ENST00000579329 HRCT1Q6UXD1 115 aa13.49□□□□□ -0.25
LIMD2-207ENST00000579329 Q6ZQY7 126 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms