RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 GAGE10A6NGK3 116 aa11.18□□□□□ -0.62
CDKN2A-213ENST00000579122 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
CDKN2A-213ENST00000579122 UBE2AP49459 152 aa11.17□□□□□ -0.62
CDKN2A-213ENST00000579122 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
CDKN2A-213ENST00000579122 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
CDKN2A-213ENST00000579122 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
CDKN2A-213ENST00000579122 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
CDKN2A-213ENST00000579122 HIST1H4GQ99525 98 aa11.16□□□□□ -0.62
CDKN2A-213ENST00000579122 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
CDKN2A-213ENST00000579122 Q6ZVH6 145 aa11.15□□□□□ -0.62
CDKN2A-213ENST00000579122 NKAPP1Q8N9T2 125 aa11.15□□□□□ -0.62
CDKN2A-213ENST00000579122 NPC2P61916 151 aa11.14□□□□□ -0.63
CDKN2A-213ENST00000579122 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
CDKN2A-213ENST00000579122 DDTP30046 118 aa11.13□□□□□ -0.63
CDKN2A-213ENST00000579122 CTAG1AP78358 180 aa11.13□□□□□ -0.63
CDKN2A-213ENST00000579122 MUSTN1Q8IVN3 82 aa11.13□□□□□ -0.63
CDKN2A-213ENST00000579122 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
CDKN2A-213ENST00000579122 CDIP1Q9H305 208 aa11.13□□□□□ -0.63
CDKN2A-213ENST00000579122 IFITM1P13164 125 aa11.12□□□□□ -0.63
CDKN2A-213ENST00000579122 TAL2Q16559 108 aa11.12□□□□□ -0.63
CDKN2A-213ENST00000579122 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
CDKN2A-213ENST00000579122 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
CDKN2A-213ENST00000579122 HSD52Q0P140 79 aa11.11□□□□□ -0.63
CDKN2A-213ENST00000579122 COPS9Q8WXC6 57 aa11.11□□□□□ -0.63
CDKN2A-213ENST00000579122 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
CDKN2A-213ENST00000579122 IGKV2-28A0A075B6P5 120 aa11.1□□□□□ -0.63
CDKN2A-213ENST00000579122 IGKV2D-28P01615 120 aa11.1□□□□□ -0.63
CDKN2A-213ENST00000579122 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CDKN2A-213ENST00000579122 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CDKN2A-213ENST00000579122 CEND1Q8N111 149 aa11.09□□□□□ -0.63
CDKN2A-213ENST00000579122 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
CDKN2A-213ENST00000579122 KRTAP9-6A0A140TA67 174 aa11.07□□□□□ -0.64
CDKN2A-213ENST00000579122 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
CDKN2A-213ENST00000579122 PRLHP81277 87 aa11.06□□□□□ -0.64
CDKN2A-213ENST00000579122 RPL24P83731 157 aaKnown RBP11.06□□□□□ -0.64
CDKN2A-213ENST00000579122 TMEM126AQ9H061 195 aa11.05□□□□□ -0.64
CDKN2A-213ENST00000579122 FAM19A1Q7Z5A9 133 aa11.04□□□□□ -0.64
CDKN2A-213ENST00000579122 Q8NDZ9 215 aa11.04□□□□□ -0.64
CDKN2A-213ENST00000579122 A4D1N5 150 aa11.03□□□□□ -0.64
CDKN2A-213ENST00000579122 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
CDKN2A-213ENST00000579122 FXYD2P54710 66 aa11.03□□□□□ -0.64
CDKN2A-213ENST00000579122 M0R143 59 aa11.02□□□□□ -0.65
CDKN2A-213ENST00000579122 NDUFC2O95298 119 aa11.02□□□□□ -0.65
CDKN2A-213ENST00000579122 VPREB1P12018 145 aa11.02□□□□□ -0.65
CDKN2A-213ENST00000579122 BVES-AS1Q5T3Y7 98 aa11.02□□□□□ -0.65
CDKN2A-213ENST00000579122 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
CDKN2A-213ENST00000579122 A6NJY4 79 aa11□□□□□ -0.65
CDKN2A-213ENST00000579122 M0R378 163 aa11□□□□□ -0.65
CDKN2A-213ENST00000579122 C3orf22Q8N5N4 141 aa11□□□□□ -0.65
CDKN2A-213ENST00000579122 NCR3O14931 201 aa10.99□□□□□ -0.65
CDKN2A-213ENST00000579122 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
CDKN2A-213ENST00000579122 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
CDKN2A-213ENST00000579122 CFC1P0CG37 223 aa10.97□□□□□ -0.65
CDKN2A-213ENST00000579122 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
CDKN2A-213ENST00000579122 BATFQ16520 125 aa10.96□□□□□ -0.65
CDKN2A-213ENST00000579122 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
CDKN2A-213ENST00000579122 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
CDKN2A-213ENST00000579122 RAB37Q96AX2 223 aa10.94□□□□□ -0.66
CDKN2A-213ENST00000579122 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
CDKN2A-213ENST00000579122 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
CDKN2A-213ENST00000579122 A0A0B4J2C4 111 aa10.93□□□□□ -0.66
CDKN2A-213ENST00000579122 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
CDKN2A-213ENST00000579122 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
CDKN2A-213ENST00000579122 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 A6NDN8 102 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 K7ERJ3 54 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 SNHG12Q9BXW3 62 aa10.92□□□□□ -0.66
CDKN2A-213ENST00000579122 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
CDKN2A-213ENST00000579122 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
CDKN2A-213ENST00000579122 TRBV10-3A0A0K0K1G6 114 aa10.89□□□□□ -0.67
CDKN2A-213ENST00000579122 IGLV6-57P01721 117 aa10.89□□□□□ -0.67
CDKN2A-213ENST00000579122 PRO1854Q9UHT4 67 aa10.89□□□□□ -0.67
CDKN2A-213ENST00000579122 KRTAP13-3Q3SY46 172 aa10.88□□□□□ -0.67
CDKN2A-213ENST00000579122 ASB16-AS1Q495Z4 193 aa10.87□□□□□ -0.67
CDKN2A-213ENST00000579122 H7C2G1 150 aa10.86□□□□□ -0.67
CDKN2A-213ENST00000579122 Q8NBF4 154 aa10.85□□□□□ -0.67
CDKN2A-213ENST00000579122 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
CDKN2A-213ENST00000579122 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
CDKN2A-213ENST00000579122 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 PRYO14603 147 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 SPINK1P00995 79 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 Q1RN00 199 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
CDKN2A-213ENST00000579122 COL5A1-AS1Q5SY13 56 aa10.81□□□□□ -0.68
CDKN2A-213ENST00000579122 SPRR1AP35321 89 aa10.79□□□□□ -0.68
CDKN2A-213ENST00000579122 SEC61BP60468 96 aaKnown RBP10.79□□□□□ -0.68
CDKN2A-213ENST00000579122 SMCR5Q8TEV8 140 aa10.79□□□□□ -0.68
CDKN2A-213ENST00000579122 TAX1BP3O14907 124 aa10.78□□□□□ -0.68
CDKN2A-213ENST00000579122 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
CDKN2A-213ENST00000579122 KRTAP4-1Q9BYQ7 146 aa10.78□□□□□ -0.68
CDKN2A-213ENST00000579122 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
CDKN2A-213ENST00000579122 LINC00483Q53H64 154 aa10.77□□□□□ -0.69
CDKN2A-213ENST00000579122 KRTAP4-16G5E9R7 235 aaPredicted RBP10.76□□□□□ -0.69
CDKN2A-213ENST00000579122 PSMB2P49721 201 aa10.76□□□□□ -0.69
CDKN2A-213ENST00000579122 ETDCA0A1B0GVM5 59 aa10.75□□□□□ -0.69
CDKN2A-213ENST00000579122 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
CDKN2A-213ENST00000579122 C9orf118A6NHY6 69 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms