RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SPANXCQ9NY87 97 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 NCR3O14931 201 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 CRYGAP11844 174 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 CTAG1AP78358 180 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 SLC25A34Q6PIV7 304 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
CDK5RAP3-209ENST00000578663 PCP4L1A6NKN8 68 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 ZNF861PO60384 105 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 MRPL55Q7Z7F7 128 aaKnown RBP4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 SPANXB1Q9NS25 103 aaPredicted RBP4.18□□□□□ -1.74
CDK5RAP3-209ENST00000578663 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 A0A087X002 238 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 UBE2BP63146 152 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 Q6ZVH6 145 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 TYMSOSQ8TAI1 123 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
CDK5RAP3-209ENST00000578663 IGKV2-28A0A075B6P5 120 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 TSTD3H0UI37 97 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 M0R378 163 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 NDUFC2O95298 119 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 IGKV2D-28P01615 120 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 IFITM1P13164 125 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 ASB16-AS1Q495Z4 193 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 HIGD1BQ9P298 99 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 UQCR10Q9UDW1 63 aa4.16□□□□□ -1.74
CDK5RAP3-209ENST00000578663 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
CDK5RAP3-209ENST00000578663 HIST1H4GQ99525 98 aa4.15□□□□□ -1.75
CDK5RAP3-209ENST00000578663 RETNLBQ9BQ08 111 aa4.15□□□□□ -1.75
CDK5RAP3-209ENST00000578663 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.75
CDK5RAP3-209ENST00000578663 TRBV10-2A0A0K0K1G8 114 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 A4D1N5 150 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 MT1HP80294 61 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
CDK5RAP3-209ENST00000578663 IGLV6-57P01721 117 aa4.13□□□□□ -1.75
CDK5RAP3-209ENST00000578663 DDTP30046 118 aa4.13□□□□□ -1.75
CDK5RAP3-209ENST00000578663 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
CDK5RAP3-209ENST00000578663 COPS9Q8WXC6 57 aa4.13□□□□□ -1.75
CDK5RAP3-209ENST00000578663 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 PRYO14603 147 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 RPL28P46779 137 aaKnown RBP4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 FXYD2P54710 66 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 HSD52Q0P140 79 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 TAL2Q16559 108 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 FAM229BQ4G0N7 80 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 CEND1Q8N111 149 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 OR13C6PQ8NH95 151 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 TMEM126AQ9H061 195 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KCNQ1DNQ9H478 68 aa4.12□□□□□ -1.75
CDK5RAP3-209ENST00000578663 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
CDK5RAP3-209ENST00000578663 BCE1O60756 84 aa4.11□□□□□ -1.75
CDK5RAP3-209ENST00000578663 SPRR1AP35321 89 aa4.11□□□□□ -1.75
CDK5RAP3-209ENST00000578663 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
CDK5RAP3-209ENST00000578663 A6NDN8 102 aa4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP4-16G5E9R7 235 aaPredicted RBP4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 CFC1P0CG37 223 aa4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 PRLHP81277 87 aa4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 FAM19A1Q7Z5A9 133 aa4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
CDK5RAP3-209ENST00000578663 TRAV13-2A0A0B4J235 113 aa4.09□□□□□ -1.75
CDK5RAP3-209ENST00000578663 UBE2AP49459 152 aa4.09□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
CDK5RAP3-209ENST00000578663 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
CDK5RAP3-209ENST00000578663 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 TMEM238LA0A1B0GVL6 79 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 ETDCA0A1B0GVM5 59 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 A6NJY4 79 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 B5MCH6 92 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 K7ERJ3 54 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 ZNF73O43830 326 aaPredicted RBP4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 BVES-AS1Q5T3Y7 98 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 NHP2Q9NX24 153 aaKnown RBP4.08□□□□□ -1.76
CDK5RAP3-209ENST00000578663 H7C2G1 150 aa4.07□□□□□ -1.76
CDK5RAP3-209ENST00000578663 HINT1P49773 126 aaPredicted RBP4.07□□□□□ -1.76
CDK5RAP3-209ENST00000578663 C6orf99Q4VX62 202 aa4.07□□□□□ -1.76
CDK5RAP3-209ENST00000578663 RAB37Q96AX2 223 aa4.07□□□□□ -1.76
CDK5RAP3-209ENST00000578663 CBY1Q9Y3M2 126 aa4.07□□□□□ -1.76
CDK5RAP3-209ENST00000578663 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
CDK5RAP3-209ENST00000578663 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
CDK5RAP3-209ENST00000578663 Q6ZRX8 168 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms