RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 TENM4Q6N022 2769 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 TRBV7-6A0A0J9YX20 115 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 ZNF861PO60384 105 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 AMELXQ99217 191 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 C6orf48Q9UBA6 75 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 LCE2BO14633 110 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 TRIAP1O43715 76 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 TNP2Q05952 138 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00208Q96KT6 92 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 TP73-AS1Q9UF72 201 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 LOC400499M0QZD8 3231 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 IGHV3OR16-9A0A0B4J2B5 98 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 Q6ZSA8 131 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 C20orf197Q8N268 126 aa1.98□□□□□ -2.09
SMCHD1-203ENST00000577880 COX8CQ7Z4L0 72 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 Q9UF83 564 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 IGLV5-37A0A075B6J1 123 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 C7orf65Q6ZTY9 151 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 IGLV7-46A0A075B6I9 117 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 C8orf87E5RJ46 101 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 PCP4P48539 62 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 V9GYY9 64 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 CFAP54Q96N23 3096 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 IGLV1-50A0A075B6I6 118 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 IGLV7-43P04211 117 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 DEFB116Q30KQ4 102 aa1.97□□□□□ -2.09
SMCHD1-203ENST00000577880 LAMA5O15230 3695 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 CFAP47Q6ZTR5 3102 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 KIAA0087Q14695 138 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 PCOTHQ58A44 107 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 SDIM1Q6ZPB5 146 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 BRK1Q8WUW1 75 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 TP53AIP1Q9HCN2 124 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 GAS8-AS1O95177 125 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 Q6ZRX8 168 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 ST20-AS1Q8NBB2 130 aa1.96□□□□□ -2.1
SMCHD1-203ENST00000577880 BPTFQ12830 3046 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 C9orf92A6NGG3 77 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 WFDC2Q14508 124 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 NDUFC1O43677 76 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 CSNK1G2-AS1Q8NCQ2 148 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 H0Y9P7 68 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 ACYP2P14621 99 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 SVIPQ8NHG7 77 aa1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 SEC61BP60468 96 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-203ENST00000577880 TEX15Q9BXT5 2789 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 A0A1B0GW54 56 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 A8MTW9 85 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 Q5VSD8 79 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 Q8N3U1 123 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 NBEAL1Q6ZS30 2694 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 FAM19A4Q96LR4 140 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 OXTP01178 125 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 PLA2G2DQ9UNK4 145 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 COL27A1Q8IZC6 1860 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 FRYQ5TBA9 3013 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 DMXL2Q8TDJ6 3036 aa1.94□□□□□ -2.1
SMCHD1-203ENST00000577880 IGLV6-57P01721 117 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 KLK9Q2XQG4 91 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 FBN2P35556 2912 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 IGLV5-39A0A0G2JS06 123 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 A6NED7 52 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 ATP5EP56381 51 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 CENPEQ02224 2701 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 CXCL6P80162 114 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 KRTAP9-2Q9BYQ4 174 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 IGSF10Q6WRI0 2623 aa1.93□□□□□ -2.1
SMCHD1-203ENST00000577880 UQCRQO14949 82 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 ELOF1P60002 83 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 OBSCN-AS1Q96MR7 158 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 STAB2Q8WWQ8 2551 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 C1orf64Q8NEQ6 169 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 PRR34Q9NV39 138 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 ADAMTSL4-AS1Q5T5F5 129 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 LINC00612Q8N6U2 182 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 FAM168BA1KXE4 195 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 C2orf91Q6ZV80 131 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 PRR26Q8N8Z3 221 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 MPLKIPQ8TAP9 179 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 CMYA5Q8N3K9 4069 aa1.92□□□□□ -2.1
SMCHD1-203ENST00000577880 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 VPREB1P12018 145 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 TLX1NBP0CAT3 122 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 SNURFQ9Y675 71 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 TRAV22A0A0B4J277 110 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 TRBV7-7A0A0K0K1E9 115 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 LOC105371267A0A1B0GV96 52 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 FREM2Q5SZK8 3169 aa1.91□□□□□ -2.1
SMCHD1-203ENST00000577880 IGLV5-45A0A087WSX0 123 aa1.9□□□□□ -2.1
SMCHD1-203ENST00000577880 FAM240AA0A1B0GVK7 77 aa1.9□□□□□ -2.1
SMCHD1-203ENST00000577880 SERTAD4-AS1Q5TG53 156 aa1.9□□□□□ -2.1
SMCHD1-203ENST00000577880 C15orf56Q8N910 161 aa1.9□□□□□ -2.1
SMCHD1-203ENST00000577880 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-203ENST00000577880 LOC101927531A0A1B0GV80 90 aa1.9□□□□□ -2.11
SMCHD1-203ENST00000577880 GIG44P09565 113 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-203ENST00000577880 DSCR10P59022 87 aa1.9□□□□□ -2.11
SMCHD1-203ENST00000577880 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms