RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 DEFB131BA0A096LNP1 70 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 CD164Q04900 197 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 Q6ZRU5 148 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 PRB2P02812 416 aaPredicted RBP3.56□□□□□ -1.84
VAPA-203ENST00000577539 COX7BP24311 80 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 ESRGQ1W209 222 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 ZNF73O43830 326 aaPredicted RBP3.56□□□□□ -1.84
VAPA-203ENST00000577539 COX7CP15954 63 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP10-11P60412 298 aa3.56□□□□□ -1.84
VAPA-203ENST00000577539 KMT2BQ9UMN6 2715 aaPredicted RBP3.56□□□□□ -1.84
VAPA-203ENST00000577539 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
VAPA-203ENST00000577539 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
VAPA-203ENST00000577539 COL6A5A8TX70 2615 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 DEFB105AQ8NG35 78 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 MUC7Q8TAX7 377 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 M0R2N4 97 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 EGFEM1PQ0D2K5 195 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 SCXQ7RTU7 201 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 NKAPP1Q8N9T2 125 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 UPK3BQ9BT76 320 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 TENM3Q9P273 2699 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
VAPA-203ENST00000577539 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
VAPA-203ENST00000577539 GVQW2A0A096LPI5 108 aaPredicted RBP3.53□□□□□ -1.84
VAPA-203ENST00000577539 M0R378 163 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP24-1Q3LI83 254 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 Q6ZQT0 140 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 IGLV9-49A0A0B4J1Y8 123 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 C1orf195Q5TG92 126 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
VAPA-203ENST00000577539 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
VAPA-203ENST00000577539 ATP5EP2Q5VTU8 51 aa3.52□□□□□ -1.85
VAPA-203ENST00000577539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.52□□□□□ -1.85
VAPA-203ENST00000577539 Q6ZRP5 223 aa3.52□□□□□ -1.85
VAPA-203ENST00000577539 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 H3BNG1 76 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
VAPA-203ENST00000577539 LINC01556Q5JQF7 62 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 NBEAL1Q6ZS30 2694 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 PDE6GP18545 87 aa3.51□□□□□ -1.85
VAPA-203ENST00000577539 LINC01547P58512 204 aaPredicted RBP3.51□□□□□ -1.85
VAPA-203ENST00000577539 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 LOC110117498A0A087WWA1 95 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 FAM236DA0A1B0GTK5 79 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 H3BQ85 93 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 FAM236CP0DP71 79 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 CRYGAP11844 174 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
VAPA-203ENST00000577539 C3orf84H3BNL1 204 aa3.49□□□□□ -1.85
VAPA-203ENST00000577539 C7orf33Q8WU49 177 aa3.49□□□□□ -1.85
VAPA-203ENST00000577539 ETDCA0A1B0GVM5 59 aa3.49□□□□□ -1.85
VAPA-203ENST00000577539 CASC10Q5T4H9 136 aa3.49□□□□□ -1.85
VAPA-203ENST00000577539 TRAV10A0A0B4J240 114 aa3.49□□□□□ -1.85
VAPA-203ENST00000577539 BAHCC1Q9P281 2608 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 NREPQ16612 68 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 Q8N9L7 120 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 LINC00588Q9Y4M8 146 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 UBE2BP63146 152 aa3.48□□□□□ -1.85
VAPA-203ENST00000577539 J3KT08 172 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 IGKV2-24A0A0C4DH68 120 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 TRBV7-4A0A0J9YYF1 115 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 DNAH10OSP0CZ25 163 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 FBN1P35555 2871 aaKnown RBP3.47□□□□□ -1.85
VAPA-203ENST00000577539 RMI2Q96E14 147 aa3.47□□□□□ -1.85
VAPA-203ENST00000577539 PSCAO43653 123 aa3.46□□□□□ -1.86
VAPA-203ENST00000577539 TMEM258P61165 79 aa3.46□□□□□ -1.86
VAPA-203ENST00000577539 BPY2O14599 106 aa3.46□□□□□ -1.86
VAPA-203ENST00000577539 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
VAPA-203ENST00000577539 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
VAPA-203ENST00000577539 TRAV7A0A075B6U4 112 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 FUSP35637 526 aaKnown RBP eCLIP3.45□□□□□ -1.86
VAPA-203ENST00000577539 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 KCNQ1DNQ9H478 68 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 CXCL6P80162 114 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.45□□□□□ -1.86
VAPA-203ENST00000577539 Q8N377 158 aa3.45□□□□□ -1.86
VAPA-203ENST00000577539 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
VAPA-203ENST00000577539 Q6ZRX8 168 aa3.44□□□□□ -1.86
VAPA-203ENST00000577539 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
VAPA-203ENST00000577539 K7EIL1 84 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 HRCT1Q6UXD1 115 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 TM2D3Q9BRN9 247 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms