RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 HRCT1Q6UXD1 115 aa6.28□□□□□ -1.4
CTDNEP1-212ENST00000576613 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
CTDNEP1-212ENST00000576613 CHCHD1Q96BP2 118 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-212ENST00000576613 CBY1Q9Y3M2 126 aa6.27□□□□□ -1.41
CTDNEP1-212ENST00000576613 LEPROTO15243 131 aa6.26□□□□□ -1.41
CTDNEP1-212ENST00000576613 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
CTDNEP1-212ENST00000576613 SPRR1BP22528 89 aa6.25□□□□□ -1.41
CTDNEP1-212ENST00000576613 NMUP48645 174 aa6.25□□□□□ -1.41
CTDNEP1-212ENST00000576613 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
CTDNEP1-212ENST00000576613 H0Y8G0 127 aa6.24□□□□□ -1.41
CTDNEP1-212ENST00000576613 J3QQQ9 107 aa6.24□□□□□ -1.41
CTDNEP1-212ENST00000576613 C10orf91Q5T1B1 145 aa6.24□□□□□ -1.41
CTDNEP1-212ENST00000576613 HSBP1O75506 76 aa6.23□□□□□ -1.41
CTDNEP1-212ENST00000576613 PLNP26678 52 aa6.23□□□□□ -1.41
CTDNEP1-212ENST00000576613 HERVK_113P61574 105 aa6.23□□□□□ -1.41
CTDNEP1-212ENST00000576613 CD164Q04900 197 aa6.23□□□□□ -1.41
CTDNEP1-212ENST00000576613 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
CTDNEP1-212ENST00000576613 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-212ENST00000576613 NPC2P61916 151 aa6.21□□□□□ -1.42
CTDNEP1-212ENST00000576613 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-212ENST00000576613 PRO1933Q9H354 126 aa6.21□□□□□ -1.42
CTDNEP1-212ENST00000576613 H7C2G1 150 aa6.2□□□□□ -1.42
CTDNEP1-212ENST00000576613 Q5XG85 94 aa6.19□□□□□ -1.42
CTDNEP1-212ENST00000576613 SOSTDC1Q6X4U4 206 aa6.19□□□□□ -1.42
CTDNEP1-212ENST00000576613 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-212ENST00000576613 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 DPM2O94777 84 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 TAL2Q16559 108 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 Q1RN00 199 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
CTDNEP1-212ENST00000576613 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
CTDNEP1-212ENST00000576613 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-212ENST00000576613 ADAMTSL4-AS1Q5T5F5 129 aa6.17□□□□□ -1.42
CTDNEP1-212ENST00000576613 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
CTDNEP1-212ENST00000576613 SPANXCQ9NY87 97 aa6.17□□□□□ -1.42
CTDNEP1-212ENST00000576613 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-212ENST00000576613 AKR1D1P51857 326 aa6.16□□□□□ -1.42
CTDNEP1-212ENST00000576613 DEFB105AQ8NG35 78 aa6.16□□□□□ -1.42
CTDNEP1-212ENST00000576613 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 SNAPINO95295 136 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 IGKCP01834 107 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 APOC3P02656 99 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 COX7BP24311 80 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 ELOF1P60002 83 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 SPANXDQ9BXN6 97 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.42
CTDNEP1-212ENST00000576613 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
CTDNEP1-212ENST00000576613 SVBPQ8N300 66 aa6.14□□□□□ -1.43
CTDNEP1-212ENST00000576613 PMCHL2Q9BQD1 86 aa6.14□□□□□ -1.43
CTDNEP1-212ENST00000576613 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
CTDNEP1-212ENST00000576613 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
CTDNEP1-212ENST00000576613 E9PLD3 99 aa6.12□□□□□ -1.43
CTDNEP1-212ENST00000576613 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
CTDNEP1-212ENST00000576613 TCL1BO95988 128 aa6.11□□□□□ -1.43
CTDNEP1-212ENST00000576613 FABP4P15090 132 aa6.11□□□□□ -1.43
CTDNEP1-212ENST00000576613 Q6Q795 121 aa6.11□□□□□ -1.43
CTDNEP1-212ENST00000576613 YPEL4Q96NS1 127 aa6.11□□□□□ -1.43
CTDNEP1-212ENST00000576613 SERF1AO75920 110 aa6.1□□□□□ -1.43
CTDNEP1-212ENST00000576613 CFC1P0CG37 223 aa6.1□□□□□ -1.43
CTDNEP1-212ENST00000576613 LINC00518Q8N0U6 118 aa6.1□□□□□ -1.43
CTDNEP1-212ENST00000576613 TRBV7-6A0A0J9YX20 115 aa6.09□□□□□ -1.43
CTDNEP1-212ENST00000576613 TIMM17BO60830 172 aa6.09□□□□□ -1.43
CTDNEP1-212ENST00000576613 LITAFQ99732 161 aa6.09□□□□□ -1.43
CTDNEP1-212ENST00000576613 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
CTDNEP1-212ENST00000576613 LINC00310P59036 64 aa6.08□□□□□ -1.44
CTDNEP1-212ENST00000576613 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
CTDNEP1-212ENST00000576613 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
CTDNEP1-212ENST00000576613 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
CTDNEP1-212ENST00000576613 TRGC2P03986 189 aa6.06□□□□□ -1.44
CTDNEP1-212ENST00000576613 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
CTDNEP1-212ENST00000576613 PCP2Q8IVA1 136 aa6.04□□□□□ -1.44
CTDNEP1-212ENST00000576613 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-212ENST00000576613 A4D1N5 150 aa6.03□□□□□ -1.44
CTDNEP1-212ENST00000576613 F8WEM9 126 aa6.03□□□□□ -1.44
CTDNEP1-212ENST00000576613 Q75L30 129 aa6.03□□□□□ -1.44
CTDNEP1-212ENST00000576613 A6NDN8 102 aa6.02□□□□□ -1.45
CTDNEP1-212ENST00000576613 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
CTDNEP1-212ENST00000576613 OBSCN-AS1Q96MR7 158 aa6.02□□□□□ -1.45
CTDNEP1-212ENST00000576613 C20orf202A1L168 122 aa6.01□□□□□ -1.45
CTDNEP1-212ENST00000576613 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
CTDNEP1-212ENST00000576613 USH2AO75445 5202 aa6□□□□□ -1.45
CTDNEP1-212ENST00000576613 SYS1-DBNDD2H3BUS1 97 aa6□□□□□ -1.45
CTDNEP1-212ENST00000576613 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
CTDNEP1-212ENST00000576613 Q6JHZ5 121 aa5.98□□□□□ -1.45
CTDNEP1-212ENST00000576613 SCGB1D4Q6XE38 83 aa5.98□□□□□ -1.45
CTDNEP1-212ENST00000576613 TTTY13Q9BZ97 58 aa5.98□□□□□ -1.45
CTDNEP1-212ENST00000576613 TRBV20-1A0A075B6N2 111 aa5.97□□□□□ -1.45
CTDNEP1-212ENST00000576613 TRBV7-7A0A0K0K1E9 115 aa5.97□□□□□ -1.45
CTDNEP1-212ENST00000576613 IFITM1P13164 125 aa5.97□□□□□ -1.45
CTDNEP1-212ENST00000576613 LINC01545Q5VT33 79 aa5.97□□□□□ -1.45
CTDNEP1-212ENST00000576613 CLEC2BQ92478 149 aa5.97□□□□□ -1.45
CTDNEP1-212ENST00000576613 Q6ZVH6 145 aa5.95□□□□□ -1.46
CTDNEP1-212ENST00000576613 Q96NJ1 140 aa5.95□□□□□ -1.46
CTDNEP1-212ENST00000576613 TRAV13-2A0A0B4J235 113 aa5.94□□□□□ -1.46
CTDNEP1-212ENST00000576613 PET117Q6UWS5 81 aa5.94□□□□□ -1.46
CTDNEP1-212ENST00000576613 SLC7A5P1Q8MH63 180 aa5.94□□□□□ -1.46
CTDNEP1-212ENST00000576613 SMIM11BQ8TCY0 68 aa5.94□□□□□ -1.46
CTDNEP1-212ENST00000576613 VAMP3Q15836 100 aa5.93□□□□□ -1.46
CTDNEP1-212ENST00000576613 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms