RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
TOM1L1-222ENST00000575909 NOTCH2Q04721 2471 aa2.81□□□□□ -1.96
TOM1L1-222ENST00000575909 ZFHX2Q9C0A1 2572 aaPredicted RBP2.81□□□□□ -1.96
TOM1L1-222ENST00000575909 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
TOM1L1-222ENST00000575909 F5P12259 2224 aa2.8□□□□□ -1.96
TOM1L1-222ENST00000575909 BRWD1Q9NSI6 2320 aa2.79□□□□□ -1.96
TOM1L1-222ENST00000575909 A0A096LNT2 108 aa2.79□□□□□ -1.96
TOM1L1-222ENST00000575909 GVQW2A0A096LPI5 108 aaPredicted RBP2.79□□□□□ -1.96
TOM1L1-222ENST00000575909 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
TOM1L1-222ENST00000575909 G3V318 75 aa2.78□□□□□ -1.96
TOM1L1-222ENST00000575909 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
TOM1L1-222ENST00000575909 MINOS1Q5TGZ0 78 aa2.78□□□□□ -1.96
TOM1L1-222ENST00000575909 K7EQZ3 153 aa2.77□□□□□ -1.97
TOM1L1-222ENST00000575909 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
TOM1L1-222ENST00000575909 SPINK13Q1W4C9 94 aa2.77□□□□□ -1.97
TOM1L1-222ENST00000575909 TMEM167AQ8TBQ9 72 aa2.77□□□□□ -1.97
TOM1L1-222ENST00000575909 C6orf48Q9UBA6 75 aa2.77□□□□□ -1.97
TOM1L1-222ENST00000575909 PDE4DIPQ5VU43 2346 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 M0QY20 66 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 USMG5Q96IX5 58 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 PRO3102Q9H379 93 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 CADP27708 2225 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 KNTC1P50748 2209 aa2.76□□□□□ -1.97
TOM1L1-222ENST00000575909 SORL1Q92673 2214 aa2.75□□□□□ -1.97
TOM1L1-222ENST00000575909 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
TOM1L1-222ENST00000575909 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
TOM1L1-222ENST00000575909 I3L2K1 104 aa2.74□□□□□ -1.97
TOM1L1-222ENST00000575909 DEFB131AP59861 70 aa2.74□□□□□ -1.97
TOM1L1-222ENST00000575909 URB1O60287 2271 aaKnown RBP2.73□□□□□ -1.97
TOM1L1-222ENST00000575909 TECTAO75443 2155 aa2.73□□□□□ -1.97
TOM1L1-222ENST00000575909 Q6ZRN7 208 aaPredicted RBP2.73□□□□□ -1.97
TOM1L1-222ENST00000575909 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
TOM1L1-222ENST00000575909 RTTNQ86VV8 2226 aa2.73□□□□□ -1.97
TOM1L1-222ENST00000575909 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
TOM1L1-222ENST00000575909 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
TOM1L1-222ENST00000575909 K7EIM0 57 aa2.71□□□□□ -1.98
TOM1L1-222ENST00000575909 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
TOM1L1-222ENST00000575909 PCOTHQ58A44 107 aa2.7□□□□□ -1.98
TOM1L1-222ENST00000575909 WFDC13Q8IUB5 93 aa2.7□□□□□ -1.98
TOM1L1-222ENST00000575909 WT1-ASQ06250 92 aa2.69□□□□□ -1.98
TOM1L1-222ENST00000575909 WFDC10BQ8IUB3 73 aa2.69□□□□□ -1.98
TOM1L1-222ENST00000575909 UBE2DNLQ8IWF7 75 aa2.69□□□□□ -1.98
TOM1L1-222ENST00000575909 ASXL3Q9C0F0 2248 aa2.68□□□□□ -1.98
TOM1L1-222ENST00000575909 COX6A2Q02221 97 aa2.67□□□□□ -1.98
TOM1L1-222ENST00000575909 USF3Q68DE3 2245 aa2.65□□□□□ -1.98
TOM1L1-222ENST00000575909 PTPRQQ9UMZ3 2332 aa2.65□□□□□ -1.99
TOM1L1-222ENST00000575909 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
TOM1L1-222ENST00000575909 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
TOM1L1-222ENST00000575909 RPL39P5Q59GN2 51 aa2.64□□□□□ -1.99
TOM1L1-222ENST00000575909 ALMS1Q8TCU4 4167 aa2.64□□□□□ -1.99
TOM1L1-222ENST00000575909 AHCTF1Q8WYP5 2266 aa2.62□□□□□ -1.99
TOM1L1-222ENST00000575909 H0YAA0 97 aa2.62□□□□□ -1.99
TOM1L1-222ENST00000575909 DEFB103AP81534 67 aa2.62□□□□□ -1.99
TOM1L1-222ENST00000575909 DEFB123Q8N688 67 aa2.62□□□□□ -1.99
TOM1L1-222ENST00000575909 CNOT1A5YKK6 2376 aaKnown RBP2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 H3BUA1 57 aa2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 DEFB109BQ30KR1 87 aa2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 TOMM7Q9P0U1 55 aa2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 FN1P02751 2386 aaKnown RBP2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 ABCA1O95477 2261 aa2.61□□□□□ -1.99
TOM1L1-222ENST00000575909 H1FX-AS1Q4G0G2 97 aa2.6□□□□□ -1.99
TOM1L1-222ENST00000575909 UNQ6190/PRO20217Q6UXQ8 127 aa2.6□□□□□ -1.99
TOM1L1-222ENST00000575909 Q6ZSA8 131 aa2.6□□□□□ -1.99
TOM1L1-222ENST00000575909 KNL1Q8NG31 2342 aa2.59□□□□□ -1.99
TOM1L1-222ENST00000575909 MMP24-AS1A0A0U1RRL7 71 aa2.59□□□□□ -1.99
TOM1L1-222ENST00000575909 DEFB108AA8MXU0 73 aa2.59□□□□□ -1.99
TOM1L1-222ENST00000575909 LYNX1P0DP58 116 aa2.59□□□□□ -1.99
TOM1L1-222ENST00000575909 KAAG1Q9UBP8 84 aa2.59□□□□□ -1.99
TOM1L1-222ENST00000575909 KLK9Q2XQG4 91 aa2.58□□□□□ -2
TOM1L1-222ENST00000575909 ASCC3Q8N3C0 2202 aaKnown RBP2.58□□□□□ -2
TOM1L1-222ENST00000575909 SRCAPQ6ZRS2 3230 aa2.58□□□□□ -2
TOM1L1-222ENST00000575909 BAHCC1Q9P281 2608 aa2.57□□□□□ -2
TOM1L1-222ENST00000575909 DOPEY2Q9Y3R5 2298 aa2.57□□□□□ -2
TOM1L1-222ENST00000575909 CACNA1EQ15878 2313 aa2.56□□□□□ -2
TOM1L1-222ENST00000575909 KRTAP12-1P59990 96 aa2.55□□□□□ -2
TOM1L1-222ENST00000575909 ICE1Q9Y2F5 2266 aa2.55□□□□□ -2
TOM1L1-222ENST00000575909 J3QKU1 62 aa2.54□□□□□ -2
TOM1L1-222ENST00000575909 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
TOM1L1-222ENST00000575909 TRIOBPQ9H2D6 2365 aa2.53□□□□□ -2
TOM1L1-222ENST00000575909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.53□□□□□ -22e-6■■□□□ 13.9
TOM1L1-222ENST00000575909 DEFB130BP0DP73 79 aa2.52□□□□□ -2.01
TOM1L1-222ENST00000575909 DEFB130AP0DP74 79 aa2.52□□□□□ -2.01
TOM1L1-222ENST00000575909 CNTRLQ7Z7A1 2325 aa2.52□□□□□ -2.01
TOM1L1-222ENST00000575909 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
TOM1L1-222ENST00000575909 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
TOM1L1-222ENST00000575909 CACNA1GO43497 2377 aa2.51□□□□□ -2.01
TOM1L1-222ENST00000575909 A8MTW9 85 aa2.49□□□□□ -2.01
TOM1L1-222ENST00000575909 H0YGG7 62 aa2.49□□□□□ -2.01
TOM1L1-222ENST00000575909 K7EIL1 84 aa2.49□□□□□ -2.01
TOM1L1-222ENST00000575909 COX14Q96I36 57 aa2.49□□□□□ -2.01
TOM1L1-222ENST00000575909 DEFB104AQ8WTQ1 72 aa2.48□□□□□ -2.01
TOM1L1-222ENST00000575909 PLCE1Q9P212 2302 aa2.48□□□□□ -2.01
TOM1L1-222ENST00000575909 FBN1P35555 2871 aaKnown RBP2.47□□□□□ -2.01
TOM1L1-222ENST00000575909 CACNA1BQ00975 2339 aa2.47□□□□□ -2.01
TOM1L1-222ENST00000575909 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
TOM1L1-222ENST00000575909 COL6A6A6NMZ7 2263 aa2.45□□□□□ -2.02
TOM1L1-222ENST00000575909 WNK2Q9Y3S1 2297 aa2.45□□□□□ -2.02
TOM1L1-222ENST00000575909 TPRP12270 2363 aaKnown RBP2.45□□□□□ -2.02
TOM1L1-222ENST00000575909 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms