RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
USP43-204ENST00000573955 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
USP43-204ENST00000573955 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
USP43-204ENST00000573955 LINC00337Q8N6G1 96 aa10.74□□□□□ -0.69
USP43-204ENST00000573955 PRR34Q9NV39 138 aa10.73□□□□□ -0.69
USP43-204ENST00000573955 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
USP43-204ENST00000573955 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
USP43-204ENST00000573955 H3BNG1 76 aa10.72□□□□□ -0.69
USP43-204ENST00000573955 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
USP43-204ENST00000573955 TENM2Q9NT68 2774 aa10.72□□□□□ -0.69
USP43-204ENST00000573955 SPAG11BQ08648 103 aa10.71□□□□□ -0.7
USP43-204ENST00000573955 TM2D3Q9BRN9 247 aa10.71□□□□□ -0.7
USP43-204ENST00000573955 C10orf25Q5T742 122 aa10.7□□□□□ -0.7
USP43-204ENST00000573955 LYSTQ99698 3801 aa10.7□□□□□ -0.7
USP43-204ENST00000573955 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
USP43-204ENST00000573955 TMEM254Q8TBM7 123 aa10.7□□□□□ -0.7
USP43-204ENST00000573955 MEGF8Q7Z7M0 2845 aa10.69□□□□□ -0.7
USP43-204ENST00000573955 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
USP43-204ENST00000573955 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
USP43-204ENST00000573955 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP43-204ENST00000573955 HAMPP81172 84 aa10.68□□□□□ -0.7
USP43-204ENST00000573955 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
USP43-204ENST00000573955 HIGD2BQ4VC39 106 aa10.66□□□□□ -0.7
USP43-204ENST00000573955 PRKDCP78527 4128 aaKnown RBP10.66□□□□□ -0.7
USP43-204ENST00000573955 NREPQ16612 68 aa10.65□□□□□ -0.71
USP43-204ENST00000573955 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
USP43-204ENST00000573955 TMEM256-PLSCR3K7ERE1 68 aa10.64□□□□□ -0.71
USP43-204ENST00000573955 Q1T7F1 81 aa10.63□□□□□ -0.71
USP43-204ENST00000573955 PRYO14603 147 aa10.63□□□□□ -0.71
USP43-204ENST00000573955 IGKV2D-24A0A075B6R9 120 aa10.62□□□□□ -0.71
USP43-204ENST00000573955 ERC2-IT1O76042 136 aa10.62□□□□□ -0.71
USP43-204ENST00000573955 KTN1-AS1Q86SY8 53 aa10.61□□□□□ -0.71
USP43-204ENST00000573955 Q8NDZ9 215 aa10.61□□□□□ -0.71
USP43-204ENST00000573955 COX17Q14061 63 aa10.6□□□□□ -0.71
USP43-204ENST00000573955 CXCL6P80162 114 aa10.6□□□□□ -0.71
USP43-204ENST00000573955 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
USP43-204ENST00000573955 CSMD3Q7Z407 3707 aa10.6□□□□□ -0.71
USP43-204ENST00000573955 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 Q6ZRP5 223 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 Q6ZVQ6 151 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 TGP01266 2768 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 LINC00167Q96N53 147 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 C6orf48Q9UBA6 75 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
USP43-204ENST00000573955 PSPHP1O15172 72 aa10.58□□□□□ -0.72
USP43-204ENST00000573955 LRCOL1A6NCL2 159 aa10.57□□□□□ -0.72
USP43-204ENST00000573955 CAMK2N2Q96S95 79 aa10.57□□□□□ -0.72
USP43-204ENST00000573955 XAGE1AQ9HD64 81 aa10.57□□□□□ -0.72
USP43-204ENST00000573955 hDV103S1A0JD37 113 aa10.56□□□□□ -0.72
USP43-204ENST00000573955 Q6ZQT0 140 aa10.56□□□□□ -0.72
USP43-204ENST00000573955 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
USP43-204ENST00000573955 H3BS24 57 aa10.55□□□□□ -0.72
USP43-204ENST00000573955 BPY2O14599 106 aa10.55□□□□□ -0.72
USP43-204ENST00000573955 Q8N814 137 aa10.55□□□□□ -0.72
USP43-204ENST00000573955 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
USP43-204ENST00000573955 UBE2BP63146 152 aa10.52□□□□□ -0.73
USP43-204ENST00000573955 DNAH7Q8WXX0 4024 aa10.51□□□□□ -0.73
USP43-204ENST00000573955 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
USP43-204ENST00000573955 LOC110117498A0A087WWA1 95 aa10.51□□□□□ -0.73
USP43-204ENST00000573955 M0R378 163 aa10.5□□□□□ -0.73
USP43-204ENST00000573955 CASC10Q5T4H9 136 aa10.5□□□□□ -0.73
USP43-204ENST00000573955 GVQW2A0A096LPI5 108 aaPredicted RBP10.5□□□□□ -0.73
USP43-204ENST00000573955 M0R2N4 97 aa10.49□□□□□ -0.73
USP43-204ENST00000573955 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
USP43-204ENST00000573955 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
USP43-204ENST00000573955 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
USP43-204ENST00000573955 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
USP43-204ENST00000573955 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
USP43-204ENST00000573955 C1orf64Q8NEQ6 169 aa10.47□□□□□ -0.73
USP43-204ENST00000573955 A8MU10 97 aa10.45□□□□□ -0.74
USP43-204ENST00000573955 NDUFS5O43920 106 aa10.45□□□□□ -0.74
USP43-204ENST00000573955 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
USP43-204ENST00000573955 A8MUN3 132 aa10.43□□□□□ -0.74
USP43-204ENST00000573955 MUC7Q8TAX7 377 aa10.43□□□□□ -0.74
USP43-204ENST00000573955 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
USP43-204ENST00000573955 PDE6GP18545 87 aa10.42□□□□□ -0.74
USP43-204ENST00000573955 PLECQ15149 4684 aaKnown RBP10.41□□□□□ -0.74
USP43-204ENST00000573955 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
USP43-204ENST00000573955 DNAH10Q8IVF4 4471 aa10.4□□□□□ -0.74
USP43-204ENST00000573955 IGLV6-57P01721 117 aa10.4□□□□□ -0.74
USP43-204ENST00000573955 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
USP43-204ENST00000573955 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
USP43-204ENST00000573955 UBE2AP49459 152 aa10.39□□□□□ -0.75
USP43-204ENST00000573955 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
USP43-204ENST00000573955 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
USP43-204ENST00000573955 DNAH1Q9P2D7 4330 aa10.39□□□□□ -0.75
USP43-204ENST00000573955 VPREB1P12018 145 aa10.38□□□□□ -0.75
USP43-204ENST00000573955 C8orf87E5RJ46 101 aa10.37□□□□□ -0.75
USP43-204ENST00000573955 PHF5AQ7RTV0 110 aaKnown RBP10.36□□□□□ -0.75
USP43-204ENST00000573955 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
USP43-204ENST00000573955 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
USP43-204ENST00000573955 Q5VV11 94 aa10.36□□□□□ -0.75
USP43-204ENST00000573955 PSCAO43653 123 aa10.35□□□□□ -0.75
USP43-204ENST00000573955 LINC00575Q6W349 94 aa10.34□□□□□ -0.75
USP43-204ENST00000573955 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
USP43-204ENST00000573955 CHKB-CPT1BH3BT56 60 aa10.33□□□□□ -0.76
USP43-204ENST00000573955 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
USP43-204ENST00000573955 Q8N9L7 120 aa10.33□□□□□ -0.76
USP43-204ENST00000573955 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
USP43-204ENST00000573955 FAM168BA1KXE4 195 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms