RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 ASXL3Q9C0F0 2248 aa1.52□□□□□ -2.17
TVP23B-205ENST00000572845 CDKN2A-AS1Q9UH64 79 aa1.52□□□□□ -2.17
TVP23B-205ENST00000572845 URB1O60287 2271 aaKnown RBP1.52□□□□□ -2.17
TVP23B-205ENST00000572845 NDUFA1O15239 70 aa1.51□□□□□ -2.17
TVP23B-205ENST00000572845 IGFL1Q6UW32 110 aa1.51□□□□□ -2.17
TVP23B-205ENST00000572845 RPS27LQ71UM5 84 aaKnown RBP1.51□□□□□ -2.17
TVP23B-205ENST00000572845 Q8IZM0 81 aa1.51□□□□□ -2.17
TVP23B-205ENST00000572845 CRIPTQ9P021 101 aa1.51□□□□□ -2.17
TVP23B-205ENST00000572845 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
TVP23B-205ENST00000572845 TTTY10Q9BZA0 68 aa1.5□□□□□ -2.17
TVP23B-205ENST00000572845 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.17
TVP23B-205ENST00000572845 ARHGAP5-AS1Q96IT6 56 aa1.49□□□□□ -2.17
TVP23B-205ENST00000572845 KNTC1P50748 2209 aa1.48□□□□□ -2.17
TVP23B-205ENST00000572845 CNOT1A5YKK6 2376 aaKnown RBP1.48□□□□□ -2.17
TVP23B-205ENST00000572845 CACNA1EQ15878 2313 aa1.48□□□□□ -2.17
TVP23B-205ENST00000572845 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
TVP23B-205ENST00000572845 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
TVP23B-205ENST00000572845 SPINK13Q1W4C9 94 aa1.47□□□□□ -2.17
TVP23B-205ENST00000572845 ICE1Q9Y2F5 2266 aa1.47□□□□□ -2.17
TVP23B-205ENST00000572845 SORL1Q92673 2214 aa1.47□□□□□ -2.17
TVP23B-205ENST00000572845 LINC00575Q6W349 94 aa1.46□□□□□ -2.18
TVP23B-205ENST00000572845 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
TVP23B-205ENST00000572845 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
TVP23B-205ENST00000572845 ASCC3Q8N3C0 2202 aaKnown RBP1.46□□□□□ -2.18
TVP23B-205ENST00000572845 AHCTF1Q8WYP5 2266 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 MRPL34Q9BQ48 92 aaKnown RBP1.44□□□□□ -2.18
TVP23B-205ENST00000572845 CACNA1GO43497 2377 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 PDE4DIPQ5VU43 2346 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 PTPRQQ9UMZ3 2332 aa1.44□□□□□ -2.18
TVP23B-205ENST00000572845 LYNX1G3V0Z9 82 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 H0YAA0 97 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 I3L2K1 104 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 K7EQZ3 153 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 PCOTHQ58A44 107 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 LINC01590Q5TEZ4 76 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 MINOS1Q5TGZ0 78 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 C6orf48Q9UBA6 75 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 DOPEY2Q9Y3R5 2298 aa1.43□□□□□ -2.18
TVP23B-205ENST00000572845 ZDBF2Q9HCK1 2354 aa1.42□□□□□ -2.18
TVP23B-205ENST00000572845 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
TVP23B-205ENST00000572845 BPTFQ12830 3046 aa1.42□□□□□ -2.18
TVP23B-205ENST00000572845 H3BSH0 61 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 USMG5Q96IX5 58 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 C10orf95Q9H7T3 257 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 TP53AIP1Q9HCN2 124 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 CACNA1BQ00975 2339 aa1.41□□□□□ -2.18
TVP23B-205ENST00000572845 RPL39P62891 51 aaKnown RBP1.4□□□□□ -2.19
TVP23B-205ENST00000572845 DEFB103AP81534 67 aa1.4□□□□□ -2.19
TVP23B-205ENST00000572845 LELP1Q5T871 98 aa1.4□□□□□ -2.19
TVP23B-205ENST00000572845 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
TVP23B-205ENST00000572845 JMJD1CQ15652 2540 aa1.4□□□□□ -2.19
TVP23B-205ENST00000572845 FAM208BQ5VWN6 2430 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 CCL22O00626 93 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 KRTAP13-1Q8IUC0 172 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 DEFB123Q8N688 67 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 KNL1Q8NG31 2342 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 NAV3Q8IVL0 2385 aa1.39□□□□□ -2.19
TVP23B-205ENST00000572845 COL6A6A6NMZ7 2263 aa1.38□□□□□ -2.19
TVP23B-205ENST00000572845 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
TVP23B-205ENST00000572845 PIGYQ3MUY2 71 aa1.38□□□□□ -2.19
TVP23B-205ENST00000572845 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
TVP23B-205ENST00000572845 RPL39LQ96EH5 51 aaKnown RBP1.38□□□□□ -2.19
TVP23B-205ENST00000572845 COX6A2Q02221 97 aa1.37□□□□□ -2.19
TVP23B-205ENST00000572845 BRD3OSQ6XYD6 125 aa1.37□□□□□ -2.19
TVP23B-205ENST00000572845 OTOGLQ3ZCN5 2332 aa1.37□□□□□ -2.19
TVP23B-205ENST00000572845 PIEZO2Q9H5I5 2752 aa1.36□□□□□ -2.19
TVP23B-205ENST00000572845 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
TVP23B-205ENST00000572845 RPS27P42677 84 aaKnown RBP1.36□□□□□ -2.19
TVP23B-205ENST00000572845 SPINK9Q5DT21 86 aa1.36□□□□□ -2.19
TVP23B-205ENST00000572845 Q6ZSA8 131 aa1.36□□□□□ -2.19
TVP23B-205ENST00000572845 BAHCC1Q9P281 2608 aa1.35□□□□□ -2.19
TVP23B-205ENST00000572845 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
TVP23B-205ENST00000572845 IGF2RP11717 2491 aa1.35□□□□□ -2.19
TVP23B-205ENST00000572845 FBN1P35555 2871 aaKnown RBP1.34□□□□□ -2.19
TVP23B-205ENST00000572845 K7EIL1 84 aa1.34□□□□□ -2.19
TVP23B-205ENST00000572845 DEFB130BP0DP73 79 aa1.34□□□□□ -2.19
TVP23B-205ENST00000572845 DEFB130AP0DP74 79 aa1.34□□□□□ -2.19
TVP23B-205ENST00000572845 LEAP2Q969E1 77 aa1.34□□□□□ -2.19
TVP23B-205ENST00000572845 KAAG1Q9UBP8 84 aa1.34□□□□□ -2.19
TVP23B-205ENST00000572845 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
TVP23B-205ENST00000572845 PRO0255Q9UI72 69 aa1.33□□□□□ -2.2
TVP23B-205ENST00000572845 ALMS1Q8TCU4 4167 aa1.33□□□□□ -2.2
TVP23B-205ENST00000572845 PLCE1Q9P212 2302 aa1.32□□□□□ -2.2
TVP23B-205ENST00000572845 CNTRLQ7Z7A1 2325 aa1.31□□□□□ -2.2
TVP23B-205ENST00000572845 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
TVP23B-205ENST00000572845 PRCDQ00LT1 54 aa1.31□□□□□ -2.2
TVP23B-205ENST00000572845 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
TVP23B-205ENST00000572845 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
TVP23B-205ENST00000572845 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
TVP23B-205ENST00000572845 PTPRZ1P23471 2315 aaPredicted RBP1.29□□□□□ -2.2
TVP23B-205ENST00000572845 SPRR1AP35321 89 aa1.29□□□□□ -2.2
TVP23B-205ENST00000572845 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
TVP23B-205ENST00000572845 WNK2Q9Y3S1 2297 aa1.28□□□□□ -2.2
TVP23B-205ENST00000572845 ZNF462Q96JM2 2506 aa1.28□□□□□ -2.2
TVP23B-205ENST00000572845 DEFB131AP59861 70 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms