RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 Q6ZRX8 168 aa9.36□□□□□ -0.91
NDE1-205ENST00000572756 Q9BRP9 147 aa9.36□□□□□ -0.91
NDE1-205ENST00000572756 SPANXCQ9NY87 97 aa9.36□□□□□ -0.91
NDE1-205ENST00000572756 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
NDE1-205ENST00000572756 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
NDE1-205ENST00000572756 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
NDE1-205ENST00000572756 LINC00483Q53H64 154 aa9.35□□□□□ -0.91
NDE1-205ENST00000572756 CTAG1AP78358 180 aa9.34□□□□□ -0.91
NDE1-205ENST00000572756 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
NDE1-205ENST00000572756 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
NDE1-205ENST00000572756 ZNF73O43830 326 aaPredicted RBP9.32□□□□□ -0.92
NDE1-205ENST00000572756 AKR1D1P51857 326 aa9.32□□□□□ -0.92
NDE1-205ENST00000572756 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
NDE1-205ENST00000572756 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
NDE1-205ENST00000572756 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
NDE1-205ENST00000572756 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
NDE1-205ENST00000572756 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
NDE1-205ENST00000572756 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
NDE1-205ENST00000572756 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
NDE1-205ENST00000572756 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
NDE1-205ENST00000572756 CBY1Q9Y3M2 126 aa9.29□□□□□ -0.92
NDE1-205ENST00000572756 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
NDE1-205ENST00000572756 S100A2P29034 98 aa9.27□□□□□ -0.93
NDE1-205ENST00000572756 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
NDE1-205ENST00000572756 LINC00518Q8N0U6 118 aa9.27□□□□□ -0.93
NDE1-205ENST00000572756 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
NDE1-205ENST00000572756 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
NDE1-205ENST00000572756 IFITM1P13164 125 aa9.26□□□□□ -0.93
NDE1-205ENST00000572756 Q8NBF4 154 aa9.26□□□□□ -0.93
NDE1-205ENST00000572756 Q6ZVH6 145 aa9.25□□□□□ -0.93
NDE1-205ENST00000572756 HINT1P49773 126 aaPredicted RBP9.24□□□□□ -0.93
NDE1-205ENST00000572756 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
NDE1-205ENST00000572756 S100A6P06703 90 aa9.23□□□□□ -0.93
NDE1-205ENST00000572756 COPS9Q8WXC6 57 aa9.23□□□□□ -0.93
NDE1-205ENST00000572756 MOBPQ13875 183 aa9.22□□□□□ -0.93
NDE1-205ENST00000572756 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
NDE1-205ENST00000572756 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
NDE1-205ENST00000572756 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.94
NDE1-205ENST00000572756 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
NDE1-205ENST00000572756 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.94
NDE1-205ENST00000572756 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.94
NDE1-205ENST00000572756 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
NDE1-205ENST00000572756 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
NDE1-205ENST00000572756 SPINK1P00995 79 aa9.19□□□□□ -0.94
NDE1-205ENST00000572756 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
NDE1-205ENST00000572756 SPRR1BP22528 89 aa9.18□□□□□ -0.94
NDE1-205ENST00000572756 COX7BP24311 80 aa9.18□□□□□ -0.94
NDE1-205ENST00000572756 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
NDE1-205ENST00000572756 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
NDE1-205ENST00000572756 HSBP1L1C9JCN9 74 aa9.17□□□□□ -0.94
NDE1-205ENST00000572756 RPS29P62273 56 aaKnown RBP9.16□□□□□ -0.94
NDE1-205ENST00000572756 A6NDN8 102 aa9.15□□□□□ -0.94
NDE1-205ENST00000572756 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
NDE1-205ENST00000572756 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
NDE1-205ENST00000572756 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
NDE1-205ENST00000572756 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
NDE1-205ENST00000572756 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
NDE1-205ENST00000572756 Q8N377 158 aa9.12□□□□□ -0.95
NDE1-205ENST00000572756 MUC2Q02817 5179 aa9.12□□□□□ -0.95
NDE1-205ENST00000572756 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
NDE1-205ENST00000572756 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
NDE1-205ENST00000572756 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
NDE1-205ENST00000572756 A4D1N5 150 aa9.08□□□□□ -0.96
NDE1-205ENST00000572756 COX8AP10176 69 aa9.08□□□□□ -0.96
NDE1-205ENST00000572756 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
NDE1-205ENST00000572756 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
NDE1-205ENST00000572756 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
NDE1-205ENST00000572756 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
NDE1-205ENST00000572756 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
NDE1-205ENST00000572756 TAL2Q16559 108 aa9.07□□□□□ -0.96
NDE1-205ENST00000572756 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
NDE1-205ENST00000572756 DLEU1O43261 78 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 SLC25A20O43772 301 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 SMIM29Q86T20 159 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
NDE1-205ENST00000572756 Q1RN00 199 aa9.04□□□□□ -0.96
NDE1-205ENST00000572756 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
NDE1-205ENST00000572756 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
NDE1-205ENST00000572756 VAMP3Q15836 100 aa9□□□□□ -0.97
NDE1-205ENST00000572756 LINC00575Q6W349 94 aa9□□□□□ -0.97
NDE1-205ENST00000572756 C14orf144Q96I85 54 aa9□□□□□ -0.97
NDE1-205ENST00000572756 PAM16Q9Y3D7 125 aa9□□□□□ -0.97
NDE1-205ENST00000572756 CD164Q04900 197 aa8.99□□□□□ -0.97
NDE1-205ENST00000572756 SPATA45Q537H7 98 aa8.99□□□□□ -0.97
NDE1-205ENST00000572756 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
NDE1-205ENST00000572756 C12orf57Q99622 126 aa8.99□□□□□ -0.97
NDE1-205ENST00000572756 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
NDE1-205ENST00000572756 LIMD2Q9BT23 127 aa8.98□□□□□ -0.97
NDE1-205ENST00000572756 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
NDE1-205ENST00000572756 VAMP8Q9BV40 100 aa8.97□□□□□ -0.97
NDE1-205ENST00000572756 C2orf91Q6ZV80 131 aa8.96□□□□□ -0.98
NDE1-205ENST00000572756 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
NDE1-205ENST00000572756 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
NDE1-205ENST00000572756 CFC1P0CG37 223 aa8.95□□□□□ -0.98
NDE1-205ENST00000572756 H7C2G1 150 aa8.94□□□□□ -0.98
NDE1-205ENST00000572756 Q6ZQY7 126 aa8.94□□□□□ -0.98
NDE1-205ENST00000572756 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
NDE1-205ENST00000572756 Q5XG85 94 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms