RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 HIGD2AQ9BW72 106 aa9.45□□□□□ -0.9
CHD3-215ENST00000572750 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
CHD3-215ENST00000572750 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
CHD3-215ENST00000572750 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
CHD3-215ENST00000572750 PAM16Q9Y3D7 125 aa9.44□□□□□ -0.9
CHD3-215ENST00000572750 FAT4Q6V0I7 4981 aa9.43□□□□□ -0.9
CHD3-215ENST00000572750 IFITM1P13164 125 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 SPATA45Q537H7 98 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 Q6ZVH6 145 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 VAMP8Q9BV40 100 aa9.42□□□□□ -0.9
CHD3-215ENST00000572750 COX8AP10176 69 aa9.41□□□□□ -0.9
CHD3-215ENST00000572750 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
CHD3-215ENST00000572750 A0A087X002 238 aa9.4□□□□□ -0.9
CHD3-215ENST00000572750 B5MCH6 92 aa9.4□□□□□ -0.9
CHD3-215ENST00000572750 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
CHD3-215ENST00000572750 PPDPFQ9H3Y8 114 aa9.4□□□□□ -0.9
CHD3-215ENST00000572750 PYY3Q5JQD4 70 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 Q6ZRX8 168 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 C14orf144Q96I85 54 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 MUC2Q02817 5179 aa9.38□□□□□ -0.91
CHD3-215ENST00000572750 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
CHD3-215ENST00000572750 Q9BRP9 147 aa9.37□□□□□ -0.91
CHD3-215ENST00000572750 DLEU1O43261 78 aa9.35□□□□□ -0.91
CHD3-215ENST00000572750 CRYGAP11844 174 aa9.35□□□□□ -0.91
CHD3-215ENST00000572750 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
CHD3-215ENST00000572750 CBY1Q9Y3M2 126 aa9.35□□□□□ -0.91
CHD3-215ENST00000572750 A6NDN8 102 aa9.34□□□□□ -0.91
CHD3-215ENST00000572750 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
CHD3-215ENST00000572750 LPAP08519 4548 aa9.34□□□□□ -0.91
CHD3-215ENST00000572750 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
CHD3-215ENST00000572750 KRTAP13-2Q52LG2 175 aa9.33□□□□□ -0.92
CHD3-215ENST00000572750 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
CHD3-215ENST00000572750 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
CHD3-215ENST00000572750 A4D1N5 150 aa9.32□□□□□ -0.92
CHD3-215ENST00000572750 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
CHD3-215ENST00000572750 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
CHD3-215ENST00000572750 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
CHD3-215ENST00000572750 TYMSOSQ8TAI1 123 aa9.31□□□□□ -0.92
CHD3-215ENST00000572750 C12orf57Q99622 126 aa9.31□□□□□ -0.92
CHD3-215ENST00000572750 TRAV13-2A0A0B4J235 113 aa9.3□□□□□ -0.92
CHD3-215ENST00000572750 HINT1P49773 126 aaPredicted RBP9.3□□□□□ -0.92
CHD3-215ENST00000572750 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
CHD3-215ENST00000572750 COX7BP24311 80 aa9.28□□□□□ -0.92
CHD3-215ENST00000572750 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
CHD3-215ENST00000572750 GAGE2AQ6NT46 116 aa9.28□□□□□ -0.92
CHD3-215ENST00000572750 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
CHD3-215ENST00000572750 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.93
CHD3-215ENST00000572750 LINC00483Q53H64 154 aa9.26□□□□□ -0.93
CHD3-215ENST00000572750 ST20-AS1Q8NBB2 130 aa9.26□□□□□ -0.93
CHD3-215ENST00000572750 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
CHD3-215ENST00000572750 TRBV7-6A0A0J9YX20 115 aa9.23□□□□□ -0.93
CHD3-215ENST00000572750 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
CHD3-215ENST00000572750 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
CHD3-215ENST00000572750 TSPAN13O95857 204 aa9.21□□□□□ -0.94
CHD3-215ENST00000572750 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
CHD3-215ENST00000572750 CEND1Q8N111 149 aa9.2□□□□□ -0.94
CHD3-215ENST00000572750 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
CHD3-215ENST00000572750 CFC1P0CG37 223 aa9.19□□□□□ -0.94
CHD3-215ENST00000572750 MOBPQ13875 183 aa9.19□□□□□ -0.94
CHD3-215ENST00000572750 TAL2Q16559 108 aa9.19□□□□□ -0.94
CHD3-215ENST00000572750 H7C2G1 150 aa9.18□□□□□ -0.94
CHD3-215ENST00000572750 FXYD2P54710 66 aa9.18□□□□□ -0.94
CHD3-215ENST00000572750 RAB37Q96AX2 223 aa9.18□□□□□ -0.94
CHD3-215ENST00000572750 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
CHD3-215ENST00000572750 Q8NBF4 154 aa9.17□□□□□ -0.94
CHD3-215ENST00000572750 UQCR10Q9UDW1 63 aa9.17□□□□□ -0.94
CHD3-215ENST00000572750 HSD52Q0P140 79 aa9.16□□□□□ -0.94
CHD3-215ENST00000572750 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
CHD3-215ENST00000572750 A6NJY4 79 aa9.15□□□□□ -0.94
CHD3-215ENST00000572750 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
CHD3-215ENST00000572750 DEFB105AQ8NG35 78 aa9.15□□□□□ -0.94
CHD3-215ENST00000572750 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
CHD3-215ENST00000572750 SPRR1BP22528 89 aa9.14□□□□□ -0.95
CHD3-215ENST00000572750 VAMP3Q15836 100 aa9.14□□□□□ -0.95
CHD3-215ENST00000572750 PRO1933Q9H354 126 aa9.13□□□□□ -0.95
CHD3-215ENST00000572750 NHP2Q9NX24 153 aaKnown RBP9.13□□□□□ -0.95
CHD3-215ENST00000572750 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
CHD3-215ENST00000572750 SLC25A20O43772 301 aa9.11□□□□□ -0.95
CHD3-215ENST00000572750 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
CHD3-215ENST00000572750 Q1RN00 199 aa9.11□□□□□ -0.95
CHD3-215ENST00000572750 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 K7ERJ3 54 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 PRR4Q16378 134 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
CHD3-215ENST00000572750 PRO1854Q9UHT4 67 aa9.09□□□□□ -0.95
CHD3-215ENST00000572750 LOC105371267A0A1B0GV96 52 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 hADV29S1A0JD25 119 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 Q6ZQY7 126 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
CHD3-215ENST00000572750 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
CHD3-215ENST00000572750 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms