RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
RAB40B-207ENST00000572603 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
RAB40B-207ENST00000572603 H0Y9J4 135 aa13.35□□□□□ -0.27
RAB40B-207ENST00000572603 UBE2AP49459 152 aa13.35□□□□□ -0.27
RAB40B-207ENST00000572603 OR13C6PQ8NH95 151 aa13.34□□□□□ -0.27
RAB40B-207ENST00000572603 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
RAB40B-207ENST00000572603 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
RAB40B-207ENST00000572603 TAL2Q16559 108 aa13.32□□□□□ -0.28
RAB40B-207ENST00000572603 ETDCA0A1B0GVM5 59 aa13.3□□□□□ -0.28
RAB40B-207ENST00000572603 ZNF73O43830 326 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-207ENST00000572603 PRO1933Q9H354 126 aa13.3□□□□□ -0.28
RAB40B-207ENST00000572603 TNXBP22105 4242 aa13.3□□□□□ -0.28
RAB40B-207ENST00000572603 B5MCH6 92 aa13.29□□□□□ -0.28
RAB40B-207ENST00000572603 C12orf57Q99622 126 aa13.29□□□□□ -0.28
RAB40B-207ENST00000572603 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
RAB40B-207ENST00000572603 KRTAP29-1A8MX34 341 aaPredicted RBP13.28□□□□□ -0.28
RAB40B-207ENST00000572603 CEND1Q8N111 149 aa13.28□□□□□ -0.28
RAB40B-207ENST00000572603 CBY1Q9Y3M2 126 aa13.28□□□□□ -0.28
RAB40B-207ENST00000572603 A6NDN8 102 aa13.27□□□□□ -0.29
RAB40B-207ENST00000572603 KRTAP1-4P0C5Y4 121 aa13.27□□□□□ -0.29
RAB40B-207ENST00000572603 HSD52Q0P140 79 aa13.26□□□□□ -0.29
RAB40B-207ENST00000572603 OXTP01178 125 aa13.25□□□□□ -0.29
RAB40B-207ENST00000572603 FXYD2P54710 66 aa13.25□□□□□ -0.29
RAB40B-207ENST00000572603 Q6ZRX8 168 aa13.25□□□□□ -0.29
RAB40B-207ENST00000572603 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
RAB40B-207ENST00000572603 CFC1BP0CG36 223 aa13.23□□□□□ -0.29
RAB40B-207ENST00000572603 CFC1P0CG37 223 aa13.23□□□□□ -0.29
RAB40B-207ENST00000572603 C6orf99Q4VX62 202 aa13.23□□□□□ -0.29
RAB40B-207ENST00000572603 Q9BRP9 147 aa13.23□□□□□ -0.29
RAB40B-207ENST00000572603 HIGD2AQ9BW72 106 aa13.23□□□□□ -0.29
RAB40B-207ENST00000572603 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
RAB40B-207ENST00000572603 LINC01600Q96MT4 127 aa13.22□□□□□ -0.29
RAB40B-207ENST00000572603 RPL13AP40429 203 aaKnown RBP13.21□□□□□ -0.29
RAB40B-207ENST00000572603 SMIM11BQ8TCY0 68 aa13.21□□□□□ -0.29
RAB40B-207ENST00000572603 A0A0B4J2C4 111 aa13.2□□□□□ -0.3
RAB40B-207ENST00000572603 MT1HL1P0DM35 61 aa13.2□□□□□ -0.3
RAB40B-207ENST00000572603 ELOF1P60002 83 aaKnown RBP13.19□□□□□ -0.3
RAB40B-207ENST00000572603 ERC2-IT1O76042 136 aa13.18□□□□□ -0.3
RAB40B-207ENST00000572603 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
RAB40B-207ENST00000572603 A6NJY4 79 aa13.17□□□□□ -0.3
RAB40B-207ENST00000572603 COX7BP24311 80 aa13.17□□□□□ -0.3
RAB40B-207ENST00000572603 TRBV7-6A0A0J9YX20 115 aa13.16□□□□□ -0.3
RAB40B-207ENST00000572603 HINT1P49773 126 aaPredicted RBP13.15□□□□□ -0.3
RAB40B-207ENST00000572603 RAB37Q96AX2 223 aa13.14□□□□□ -0.31
RAB40B-207ENST00000572603 SPRR4Q96PI1 79 aa13.14□□□□□ -0.31
RAB40B-207ENST00000572603 KRTAP10-8P60410 259 aa13.13□□□□□ -0.31
RAB40B-207ENST00000572603 A0A1B0GWB2 263 aa13.12□□□□□ -0.31
RAB40B-207ENST00000572603 PRR26Q8N8Z3 221 aa13.12□□□□□ -0.31
RAB40B-207ENST00000572603 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
RAB40B-207ENST00000572603 TSTD3H0UI37 97 aa13.11□□□□□ -0.31
RAB40B-207ENST00000572603 BVES-AS1Q5T3Y7 98 aa13.11□□□□□ -0.31
RAB40B-207ENST00000572603 NHP2Q9NX24 153 aaKnown RBP13.11□□□□□ -0.31
RAB40B-207ENST00000572603 A0A087X002 238 aa13.1□□□□□ -0.31
RAB40B-207ENST00000572603 J3QL48 77 aa13.1□□□□□ -0.31
RAB40B-207ENST00000572603 H7C2G1 150 aa13.09□□□□□ -0.31
RAB40B-207ENST00000572603 K7ERJ3 54 aa13.09□□□□□ -0.31
RAB40B-207ENST00000572603 CTAG1AP78358 180 aa13.09□□□□□ -0.31
RAB40B-207ENST00000572603 DHRS4-AS1Q9P1J3 65 aa13.09□□□□□ -0.31
RAB40B-207ENST00000572603 PRO1854Q9UHT4 67 aa13.09□□□□□ -0.31
RAB40B-207ENST00000572603 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
RAB40B-207ENST00000572603 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
RAB40B-207ENST00000572603 HERC1Q15751 4861 aa13.08□□□□□ -0.32
RAB40B-207ENST00000572603 LINC00483Q53H64 154 aa13.06□□□□□ -0.32
RAB40B-207ENST00000572603 ST20-AS1Q8NBB2 130 aa13.06□□□□□ -0.32
RAB40B-207ENST00000572603 KRTAP13-2Q52LG2 175 aa13.05□□□□□ -0.32
RAB40B-207ENST00000572603 CRYGAP11844 174 aa13.03□□□□□ -0.32
RAB40B-207ENST00000572603 M0R143 59 aa13.01□□□□□ -0.33
RAB40B-207ENST00000572603 VAMP3Q15836 100 aa13.01□□□□□ -0.33
RAB40B-207ENST00000572603 GAGE2AQ6NT46 116 aa13.01□□□□□ -0.33
RAB40B-207ENST00000572603 LINC00575Q6W349 94 aa13.01□□□□□ -0.33
RAB40B-207ENST00000572603 Q1RN00 199 aa13□□□□□ -0.33
RAB40B-207ENST00000572603 TSPAN13O95857 204 aa12.98□□□□□ -0.33
RAB40B-207ENST00000572603 SPRR1BP22528 89 aa12.98□□□□□ -0.33
RAB40B-207ENST00000572603 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
RAB40B-207ENST00000572603 TRIAP1O43715 76 aa12.97□□□□□ -0.33
RAB40B-207ENST00000572603 LINC01547P58512 204 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-207ENST00000572603 IGLV5-48A0A075B6I7 105 aa12.94□□□□□ -0.34
RAB40B-207ENST00000572603 TYMSOSQ8TAI1 123 aa12.94□□□□□ -0.34
RAB40B-207ENST00000572603 FAM218AQ96MZ4 157 aa12.94□□□□□ -0.34
RAB40B-207ENST00000572603 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
RAB40B-207ENST00000572603 SLC25A20O43772 301 aa12.93□□□□□ -0.34
RAB40B-207ENST00000572603 H0YGX0 51 aa12.92□□□□□ -0.34
RAB40B-207ENST00000572603 Q6ZQY7 126 aa12.89□□□□□ -0.35
RAB40B-207ENST00000572603 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
RAB40B-207ENST00000572603 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
RAB40B-207ENST00000572603 PSMB2P49721 201 aa12.87□□□□□ -0.35
RAB40B-207ENST00000572603 Q8N377 158 aa12.87□□□□□ -0.35
RAB40B-207ENST00000572603 IGLV9-49A0A0B4J1Y8 123 aa12.86□□□□□ -0.35
RAB40B-207ENST00000572603 MOBPQ13875 183 aa12.86□□□□□ -0.35
RAB40B-207ENST00000572603 BATFQ16520 125 aa12.86□□□□□ -0.35
RAB40B-207ENST00000572603 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-207ENST00000572603 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
RAB40B-207ENST00000572603 CLEC2BQ92478 149 aa12.86□□□□□ -0.35
RAB40B-207ENST00000572603 A0A1B0GX51 115 aa12.83□□□□□ -0.36
RAB40B-207ENST00000572603 LINC00304Q8N9R0 145 aa12.82□□□□□ -0.36
RAB40B-207ENST00000572603 HMCN2Q8NDA2 5059 aa12.81□□□□□ -0.36
RAB40B-207ENST00000572603 Q8NBF4 154 aa12.81□□□□□ -0.36
RAB40B-207ENST00000572603 LAMTOR3Q9UHA4 124 aa12.81□□□□□ -0.36
RAB40B-207ENST00000572603 COX6CP09669 75 aa12.8□□□□□ -0.36
RAB40B-207ENST00000572603 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms