RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 S100A12P80511 92 aa8.06□□□□□ -1.12
CCDC40-205ENST00000571028 PRLHP81277 87 aa8.06□□□□□ -1.12
CCDC40-205ENST00000571028 PRYO14603 147 aa8.05□□□□□ -1.12
CCDC40-205ENST00000571028 DLEU1O43261 78 aa8.05□□□□□ -1.12
CCDC40-205ENST00000571028 ZNF861PO60384 105 aa8.05□□□□□ -1.12
CCDC40-205ENST00000571028 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
CCDC40-205ENST00000571028 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
CCDC40-205ENST00000571028 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
CCDC40-205ENST00000571028 LPAP08519 4548 aa8.04□□□□□ -1.12
CCDC40-205ENST00000571028 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
CCDC40-205ENST00000571028 A6NDN8 102 aa8.03□□□□□ -1.12
CCDC40-205ENST00000571028 IGLV6-57P01721 117 aa8.03□□□□□ -1.12
CCDC40-205ENST00000571028 LINC00518Q8N0U6 118 aa8.03□□□□□ -1.12
CCDC40-205ENST00000571028 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
CCDC40-205ENST00000571028 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
CCDC40-205ENST00000571028 A4D1N5 150 aa8.02□□□□□ -1.13
CCDC40-205ENST00000571028 H0Y9J4 135 aa8.02□□□□□ -1.13
CCDC40-205ENST00000571028 C2orf91Q6ZV80 131 aa8.02□□□□□ -1.13
CCDC40-205ENST00000571028 C12orf57Q99622 126 aa8.02□□□□□ -1.13
CCDC40-205ENST00000571028 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
CCDC40-205ENST00000571028 LOC105371267A0A1B0GV96 52 aa8□□□□□ -1.13
CCDC40-205ENST00000571028 PRO1933Q9H354 126 aa8□□□□□ -1.13
CCDC40-205ENST00000571028 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-205ENST00000571028 SPRR1AP35321 89 aa7.99□□□□□ -1.13
CCDC40-205ENST00000571028 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
CCDC40-205ENST00000571028 PPDPFQ9H3Y8 114 aa7.99□□□□□ -1.13
CCDC40-205ENST00000571028 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
CCDC40-205ENST00000571028 UQCR10Q9UDW1 63 aa7.98□□□□□ -1.13
CCDC40-205ENST00000571028 MUC2Q02817 5179 aa7.97□□□□□ -1.13
CCDC40-205ENST00000571028 TRAV13-2A0A0B4J235 113 aa7.97□□□□□ -1.13
CCDC40-205ENST00000571028 B5MCH6 92 aa7.97□□□□□ -1.13
CCDC40-205ENST00000571028 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
CCDC40-205ENST00000571028 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-205ENST00000571028 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
CCDC40-205ENST00000571028 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-205ENST00000571028 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
CCDC40-205ENST00000571028 PRR4Q16378 134 aa7.95□□□□□ -1.14
CCDC40-205ENST00000571028 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
CCDC40-205ENST00000571028 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
CCDC40-205ENST00000571028 H7C2G1 150 aa7.94□□□□□ -1.14
CCDC40-205ENST00000571028 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
CCDC40-205ENST00000571028 TAL2Q16559 108 aa7.94□□□□□ -1.14
CCDC40-205ENST00000571028 CEND1Q8N111 149 aa7.94□□□□□ -1.14
CCDC40-205ENST00000571028 RAB37Q96AX2 223 aa7.94□□□□□ -1.14
CCDC40-205ENST00000571028 COX7BP24311 80 aa7.93□□□□□ -1.14
CCDC40-205ENST00000571028 Q6ZRX8 168 aa7.93□□□□□ -1.14
CCDC40-205ENST00000571028 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
CCDC40-205ENST00000571028 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
CCDC40-205ENST00000571028 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
CCDC40-205ENST00000571028 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
CCDC40-205ENST00000571028 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
CCDC40-205ENST00000571028 CFC1P0CG37 223 aa7.92□□□□□ -1.14
CCDC40-205ENST00000571028 HSD52Q0P140 79 aa7.92□□□□□ -1.14
CCDC40-205ENST00000571028 FXYD2P54710 66 aa7.91□□□□□ -1.14
CCDC40-205ENST00000571028 Q9BRP9 147 aa7.91□□□□□ -1.14
CCDC40-205ENST00000571028 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
CCDC40-205ENST00000571028 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
CCDC40-205ENST00000571028 A6NJY4 79 aa7.9□□□□□ -1.14
CCDC40-205ENST00000571028 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
CCDC40-205ENST00000571028 Q1RN00 199 aa7.88□□□□□ -1.15
CCDC40-205ENST00000571028 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
CCDC40-205ENST00000571028 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
CCDC40-205ENST00000571028 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
CCDC40-205ENST00000571028 A0A0B4J2C4 111 aa7.87□□□□□ -1.15
CCDC40-205ENST00000571028 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
CCDC40-205ENST00000571028 CRYGAP11844 174 aa7.87□□□□□ -1.15
CCDC40-205ENST00000571028 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
CCDC40-205ENST00000571028 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
CCDC40-205ENST00000571028 A0A087X002 238 aa7.86□□□□□ -1.15
CCDC40-205ENST00000571028 K7ERJ3 54 aa7.86□□□□□ -1.15
CCDC40-205ENST00000571028 CTAG1AP78358 180 aa7.86□□□□□ -1.15
CCDC40-205ENST00000571028 VAMP3Q15836 100 aa7.86□□□□□ -1.15
CCDC40-205ENST00000571028 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
CCDC40-205ENST00000571028 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
CCDC40-205ENST00000571028 TSTD3H0UI37 97 aa7.85□□□□□ -1.15
CCDC40-205ENST00000571028 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
CCDC40-205ENST00000571028 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
CCDC40-205ENST00000571028 BVES-AS1Q5T3Y7 98 aa7.84□□□□□ -1.15
CCDC40-205ENST00000571028 DEFB105AQ8NG35 78 aa7.84□□□□□ -1.15
CCDC40-205ENST00000571028 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
CCDC40-205ENST00000571028 KRTAP13-2Q52LG2 175 aa7.82□□□□□ -1.16
CCDC40-205ENST00000571028 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
CCDC40-205ENST00000571028 SLC25A20O43772 301 aa7.81□□□□□ -1.16
CCDC40-205ENST00000571028 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
CCDC40-205ENST00000571028 IGLV9-49A0A0B4J1Y8 123 aa7.8□□□□□ -1.16
CCDC40-205ENST00000571028 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
CCDC40-205ENST00000571028 M0R143 59 aa7.79□□□□□ -1.16
CCDC40-205ENST00000571028 PSMB2P49721 201 aa7.79□□□□□ -1.16
CCDC40-205ENST00000571028 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
CCDC40-205ENST00000571028 BATFQ16520 125 aa7.78□□□□□ -1.16
CCDC40-205ENST00000571028 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
CCDC40-205ENST00000571028 C9orf153Q5TBE3 101 aa7.77□□□□□ -1.17
CCDC40-205ENST00000571028 TRIAP1O43715 76 aa7.76□□□□□ -1.17
CCDC40-205ENST00000571028 TSPAN13O95857 204 aa7.76□□□□□ -1.17
CCDC40-205ENST00000571028 MOBPQ13875 183 aa7.76□□□□□ -1.17
CCDC40-205ENST00000571028 H0YGX0 51 aa7.75□□□□□ -1.17
CCDC40-205ENST00000571028 TEX49A0A1B0GTD5 131 aa7.74□□□□□ -1.17
CCDC40-205ENST00000571028 Q6ZQY7 126 aa7.74□□□□□ -1.17
CCDC40-205ENST00000571028 FAM218AQ96MZ4 157 aa7.74□□□□□ -1.17
CCDC40-205ENST00000571028 LAMTOR3Q9UHA4 124 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms