RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZC2HC1BQ5TFG8 222 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 Q6ZUT4 128 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 ERASQ7Z444 233 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 ORAOV1Q8WV07 137 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 TOMM6Q96B49 74 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 URB1-AS1Q96HZ7 61 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 PMCHL2Q9BQD1 86 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 GEMIN7Q9H840 131 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 PAM16Q9Y3D7 125 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 IGLV4-3A0A075B6K6 122 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 ATP5LO75964 103 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 PMVKQ15126 192 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 C14orf144Q96I85 54 aa3.41□□□□□ -1.86
HERPUD1-217ENST00000569429 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 IGLC3P0DOY3 106 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 SEC11AP67812 179 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 IFI27L1Q96BM0 104 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 CST9LQ9H4G1 147 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.87
HERPUD1-217ENST00000569429 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
HERPUD1-217ENST00000569429 PRSS2P07478 247 aa3.39□□□□□ -1.87
HERPUD1-217ENST00000569429 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
HERPUD1-217ENST00000569429 SLC25A34Q6PIV7 304 aa3.39□□□□□ -1.87
HERPUD1-217ENST00000569429 PLNP26678 52 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 HERVK_113P63121 156 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 PRLHP81277 87 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 KIAA0087Q14695 138 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 C6orf226Q5I0X4 101 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 TMEM170BQ5T4T1 132 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 LINC00469Q8N7U9 141 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 AMELXQ99217 191 aa3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 CHTOPQ9Y3Y2 248 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-217ENST00000569429 A0A096LNJ9 63 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 TRAV12-1A0A0B4J245 112 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 TINCRA0A1B0GVN0 87 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 H3BRM9 83 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 DPM2O94777 84 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 CKS1BP61024 79 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 COL5A1-AS1Q5SY13 56 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 ATOH7Q8N100 152 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
HERPUD1-217ENST00000569429 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 DLEU1O43261 78 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 IGKCP01834 107 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 SPINK8P0C7L1 97 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 COX8AP10176 69 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 XAGE1AQ9HD64 81 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 CDKN2A-AS1Q9UH64 79 aa3.36□□□□□ -1.87
HERPUD1-217ENST00000569429 F8VRH5 84 aa3.35□□□□□ -1.87
HERPUD1-217ENST00000569429 IGLV6-57P01721 117 aa3.35□□□□□ -1.87
HERPUD1-217ENST00000569429 HERVK_113P61574 105 aa3.35□□□□□ -1.87
HERPUD1-217ENST00000569429 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
HERPUD1-217ENST00000569429 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
HERPUD1-217ENST00000569429 BATFQ16520 125 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 C2orf82Q6UX34 121 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 BOD1L2Q8IYS8 172 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 COX7B2Q8TF08 81 aa3.34□□□□□ -1.87
HERPUD1-217ENST00000569429 A0A1B0GV90 55 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 A6NDN8 102 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 C11orf86A6NJI1 115 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 ZNF22P17026 224 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 NMUP48645 174 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 HSD52Q0P140 79 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 ZNF625Q96I27 306 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
HERPUD1-217ENST00000569429 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 SMIM1B2RUZ4 78 aa3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 PFN2P35080 140 aa3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 HINT1P49773 126 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 TAL2Q16559 108 aa3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 Q8IZM0 81 aa3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-217ENST00000569429 IGLV5-45A0A087WSX0 123 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 A0A0U1RRA0 63 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 CXCL5P42830 114 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 LINC00158P58513 81 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 MEIG1Q5JSS6 88 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 BVES-AS1Q5T3Y7 98 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 GAGE2AQ6NT46 116 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 TMEM126AQ9H061 195 aa3.31□□□□□ -1.88
HERPUD1-217ENST00000569429 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 MYMXA0A1B0GTQ4 84 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 E9PLD3 99 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 LEPROTO15243 131 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms