RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 OR13C6PQ8NH95 151 aa5.36□□□□□ -1.55
GTF3C1-210ENST00000569394 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
GTF3C1-210ENST00000569394 PRYO14603 147 aa5.35□□□□□ -1.55
GTF3C1-210ENST00000569394 TYMSOSQ8TAI1 123 aa5.35□□□□□ -1.55
GTF3C1-210ENST00000569394 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
GTF3C1-210ENST00000569394 SCGB1D1O95968 90 aa5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 CRYGAP11844 174 aa5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 S100A12P80511 92 aa5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 LITAFQ99732 161 aa5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
GTF3C1-210ENST00000569394 RPL13AP40429 203 aaKnown RBP5.33□□□□□ -1.56
GTF3C1-210ENST00000569394 KCNQ1DNQ9H478 68 aa5.33□□□□□ -1.56
GTF3C1-210ENST00000569394 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 C3orf22Q8N5N4 141 aa5.32□□□□□ -1.56
GTF3C1-210ENST00000569394 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
GTF3C1-210ENST00000569394 ERC2-IT1O76042 136 aa5.31□□□□□ -1.56
GTF3C1-210ENST00000569394 NDUFC2O95298 119 aa5.31□□□□□ -1.56
GTF3C1-210ENST00000569394 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
GTF3C1-210ENST00000569394 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
GTF3C1-210ENST00000569394 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 TIMM17BO60830 172 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 SPRR1AP35321 89 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 PRR4Q16378 134 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 MUSTN1Q8IVN3 82 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 SPRR4Q96PI1 79 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 SPANXCQ9NY87 97 aa5.3□□□□□ -1.56
GTF3C1-210ENST00000569394 A6NDN8 102 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 C5orf52A6NGY3 159 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 IGLV6-57P01721 117 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 XP32Q5T750 250 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 Q9BRP9 147 aa5.29□□□□□ -1.56
GTF3C1-210ENST00000569394 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
GTF3C1-210ENST00000569394 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
GTF3C1-210ENST00000569394 SPANXDQ9BXN6 97 aa5.28□□□□□ -1.56
GTF3C1-210ENST00000569394 LPAP08519 4548 aa5.28□□□□□ -1.56
GTF3C1-210ENST00000569394 HINT1P49773 126 aaPredicted RBP5.27□□□□□ -1.57
GTF3C1-210ENST00000569394 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
GTF3C1-210ENST00000569394 Q6ZRX8 168 aa5.27□□□□□ -1.57
GTF3C1-210ENST00000569394 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
GTF3C1-210ENST00000569394 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
GTF3C1-210ENST00000569394 AKR1D1P51857 326 aa5.26□□□□□ -1.57
GTF3C1-210ENST00000569394 C6orf99Q4VX62 202 aa5.26□□□□□ -1.57
GTF3C1-210ENST00000569394 C12orf57Q99622 126 aa5.26□□□□□ -1.57
GTF3C1-210ENST00000569394 LINC00518Q8N0U6 118 aa5.25□□□□□ -1.57
GTF3C1-210ENST00000569394 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
GTF3C1-210ENST00000569394 C14orf144Q96I85 54 aa5.25□□□□□ -1.57
GTF3C1-210ENST00000569394 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
GTF3C1-210ENST00000569394 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
GTF3C1-210ENST00000569394 COX7BP24311 80 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 MOBPQ13875 183 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 JOSD1Q15040 202 aaPredicted RBP5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 C9orf153Q5TBE3 101 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 Q8NBF4 154 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 LRP2P98164 4655 aa5.24□□□□□ -1.57
GTF3C1-210ENST00000569394 IFITM1P13164 125 aa5.23□□□□□ -1.57
GTF3C1-210ENST00000569394 PCP4P48539 62 aa5.23□□□□□ -1.57
GTF3C1-210ENST00000569394 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
GTF3C1-210ENST00000569394 A4D1N5 150 aa5.22□□□□□ -1.57
GTF3C1-210ENST00000569394 HIST1H4GQ99525 98 aa5.22□□□□□ -1.57
GTF3C1-210ENST00000569394 Q6ZVH6 145 aa5.21□□□□□ -1.58
GTF3C1-210ENST00000569394 SMIM11BQ8TCY0 68 aa5.21□□□□□ -1.58
GTF3C1-210ENST00000569394 VAMP8Q9BV40 100 aa5.21□□□□□ -1.58
GTF3C1-210ENST00000569394 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
GTF3C1-210ENST00000569394 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 H7C2G1 150 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 COX8AP10176 69 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 TAL2Q16559 108 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 Q1RN00 199 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
GTF3C1-210ENST00000569394 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
GTF3C1-210ENST00000569394 DHRS4-AS1Q9P1J3 65 aa5.19□□□□□ -1.58
GTF3C1-210ENST00000569394 A0A1B0GWB2 263 aa5.17□□□□□ -1.58
GTF3C1-210ENST00000569394 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
GTF3C1-210ENST00000569394 IGLV7-46A0A075B6I9 117 aa5.16□□□□□ -1.58
GTF3C1-210ENST00000569394 A0A0G2JQZ4 141 aa5.16□□□□□ -1.58
GTF3C1-210ENST00000569394 PYY3Q5JQD4 70 aa5.16□□□□□ -1.58
GTF3C1-210ENST00000569394 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
GTF3C1-210ENST00000569394 SLC25A34Q6PIV7 304 aa5.16□□□□□ -1.58
GTF3C1-210ENST00000569394 VAMP3Q15836 100 aa5.15□□□□□ -1.59
GTF3C1-210ENST00000569394 RAB37Q96AX2 223 aa5.15□□□□□ -1.59
GTF3C1-210ENST00000569394 LAMTOR3Q9UHA4 124 aa5.15□□□□□ -1.59
GTF3C1-210ENST00000569394 C2orf91Q6ZV80 131 aa5.14□□□□□ -1.59
GTF3C1-210ENST00000569394 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
GTF3C1-210ENST00000569394 TRBV7-6A0A0J9YX20 115 aa5.13□□□□□ -1.59
GTF3C1-210ENST00000569394 TEX49A0A1B0GTD5 131 aa5.13□□□□□ -1.59
GTF3C1-210ENST00000569394 DLEU1O43261 78 aa5.13□□□□□ -1.59
GTF3C1-210ENST00000569394 SLC25A20O43772 301 aa5.13□□□□□ -1.59
GTF3C1-210ENST00000569394 SPINK1P00995 79 aa5.12□□□□□ -1.59
GTF3C1-210ENST00000569394 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
GTF3C1-210ENST00000569394 CFC1P0CG37 223 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms