RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TRBV10-3A0A0K0K1G6 114 aa6.49□□□□□ -1.37
CDH3-210ENST00000569117 UBE2BP63146 152 aa6.49□□□□□ -1.37
CDH3-210ENST00000569117 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 S100A7L2Q5SY68 101 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 TMEM126AQ9H061 195 aa6.48□□□□□ -1.37
CDH3-210ENST00000569117 A0A1B0GWB2 263 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 CFC1P0CG37 223 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
CDH3-210ENST00000569117 CBY1Q9Y3M2 126 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 HSPG2P98160 4391 aa6.47□□□□□ -1.37
CDH3-210ENST00000569117 TRAV23DV6A0A075B6W5 121 aa6.46□□□□□ -1.38
CDH3-210ENST00000569117 A6NDN8 102 aa6.46□□□□□ -1.38
CDH3-210ENST00000569117 HINT1P49773 126 aaPredicted RBP6.46□□□□□ -1.38
CDH3-210ENST00000569117 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
CDH3-210ENST00000569117 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.38
CDH3-210ENST00000569117 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
CDH3-210ENST00000569117 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
CDH3-210ENST00000569117 SPRR1AP35321 89 aa6.45□□□□□ -1.38
CDH3-210ENST00000569117 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
CDH3-210ENST00000569117 RYR1P21817 5038 aa6.45□□□□□ -1.38
CDH3-210ENST00000569117 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
CDH3-210ENST00000569117 REG3GQ6UW15 175 aa6.44□□□□□ -1.38
CDH3-210ENST00000569117 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
CDH3-210ENST00000569117 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
CDH3-210ENST00000569117 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
CDH3-210ENST00000569117 K7ERJ3 54 aa6.43□□□□□ -1.38
CDH3-210ENST00000569117 BCE1O60756 84 aa6.43□□□□□ -1.38
CDH3-210ENST00000569117 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
CDH3-210ENST00000569117 PCP4L1A6NKN8 68 aa6.42□□□□□ -1.38
CDH3-210ENST00000569117 ZNF73O43830 326 aaPredicted RBP6.42□□□□□ -1.38
CDH3-210ENST00000569117 C1orf137Q5JT78 98 aa6.42□□□□□ -1.38
CDH3-210ENST00000569117 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
CDH3-210ENST00000569117 DIRC1Q969H9 104 aa6.42□□□□□ -1.38
CDH3-210ENST00000569117 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
CDH3-210ENST00000569117 BATFQ16520 125 aa6.41□□□□□ -1.38
CDH3-210ENST00000569117 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
CDH3-210ENST00000569117 XP32Q5T750 250 aa6.41□□□□□ -1.38
CDH3-210ENST00000569117 Q8N1X5 172 aa6.41□□□□□ -1.38
CDH3-210ENST00000569117 FAT1Q14517 4588 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.38
CDH3-210ENST00000569117 Q5VSD8 79 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.38
CDH3-210ENST00000569117 TRBV7-6A0A0J9YX20 115 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 H0Y9J4 135 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 H7C2G1 150 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 TSPAN13O95857 204 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 Q1RN00 199 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 Q6ZRX8 168 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
CDH3-210ENST00000569117 ELOF1P60002 83 aaKnown RBP6.38□□□□□ -1.39
CDH3-210ENST00000569117 PRLHP81277 87 aa6.38□□□□□ -1.39
CDH3-210ENST00000569117 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
CDH3-210ENST00000569117 UBE2AP49459 152 aa6.37□□□□□ -1.39
CDH3-210ENST00000569117 ZNF861PO60384 105 aa6.36□□□□□ -1.39
CDH3-210ENST00000569117 COX7BP24311 80 aa6.36□□□□□ -1.39
CDH3-210ENST00000569117 VAMP3Q15836 100 aa6.35□□□□□ -1.39
CDH3-210ENST00000569117 Q9BRP9 147 aa6.35□□□□□ -1.39
CDH3-210ENST00000569117 COL5A1-AS1Q5SY13 56 aa6.34□□□□□ -1.39
CDH3-210ENST00000569117 SMCR5Q8TEV8 140 aa6.34□□□□□ -1.39
CDH3-210ENST00000569117 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
CDH3-210ENST00000569117 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
CDH3-210ENST00000569117 PSMB2P49721 201 aa6.33□□□□□ -1.4
CDH3-210ENST00000569117 HIGD2AQ9BW72 106 aa6.33□□□□□ -1.4
CDH3-210ENST00000569117 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
CDH3-210ENST00000569117 HERC2O95714 4834 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 H0YGX0 51 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 COX6CP09669 75 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 SPINK6Q6UWN8 80 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
CDH3-210ENST00000569117 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
CDH3-210ENST00000569117 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
CDH3-210ENST00000569117 FAM218AQ96MZ4 157 aa6.3□□□□□ -1.4
CDH3-210ENST00000569117 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
CDH3-210ENST00000569117 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
CDH3-210ENST00000569117 A0A1B0GX51 115 aa6.29□□□□□ -1.4
CDH3-210ENST00000569117 H3BUT2 72 aa6.29□□□□□ -1.4
CDH3-210ENST00000569117 SLC25A20O43772 301 aa6.29□□□□□ -1.4
CDH3-210ENST00000569117 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
CDH3-210ENST00000569117 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
CDH3-210ENST00000569117 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
CDH3-210ENST00000569117 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
CDH3-210ENST00000569117 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
CDH3-210ENST00000569117 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
CDH3-210ENST00000569117 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
CDH3-210ENST00000569117 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
CDH3-210ENST00000569117 LST1O00453 97 aa6.26□□□□□ -1.41
CDH3-210ENST00000569117 SNCGO76070 127 aa6.26□□□□□ -1.41
CDH3-210ENST00000569117 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CDH3-210ENST00000569117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms