RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 GAFA1Q96PS6 74 aa2.71□□□□□ -1.98
UBR1-208ENST00000569066 C5orf42Q9H799 3197 aa2.71□□□□□ -1.98
UBR1-208ENST00000569066 SPTBN5Q9NRC6 3674 aaKnown RBP2.71□□□□□ -1.98
UBR1-208ENST00000569066 ETDCA0A1B0GVM5 59 aa2.71□□□□□ -1.98
UBR1-208ENST00000569066 CCL18P55774 89 aa2.71□□□□□ -1.98
UBR1-208ENST00000569066 COX7B2Q8TF08 81 aa2.71□□□□□ -1.98
UBR1-208ENST00000569066 I3L2K1 104 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 RNASE3P12724 160 aaKnown RBP2.7□□□□□ -1.98
UBR1-208ENST00000569066 DCHS1Q96JQ0 3298 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 M0QY20 66 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 LINC00158P58513 81 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 DEFB112Q30KQ8 113 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
UBR1-208ENST00000569066 CACNA1GO43497 2377 aa2.69□□□□□ -1.98
UBR1-208ENST00000569066 ASPMQ8IZT6 3477 aa2.69□□□□□ -1.98
UBR1-208ENST00000569066 A0A1B0GW54 56 aa2.69□□□□□ -1.98
UBR1-208ENST00000569066 DMDP11532 3685 aa2.69□□□□□ -1.98
UBR1-208ENST00000569066 TRGV4A0A0C4DH28 118 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 XAGE1AQ9HD64 81 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 HIVEP2P31629 2446 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 H0Y9P7 68 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 DEFB113Q30KQ7 82 aa2.68□□□□□ -1.98
UBR1-208ENST00000569066 K7EIM0 57 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 DEFB114Q30KQ6 69 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 TRIOO75962 3097 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 SPENQ96T58 3664 aaKnown RBP2.67□□□□□ -1.98
UBR1-208ENST00000569066 TECTAO75443 2155 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 LENEPQ9Y5L5 61 aa2.67□□□□□ -1.98
UBR1-208ENST00000569066 WNK2Q9Y3S1 2297 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 ASXL3Q9C0F0 2248 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 C9orf163Q8N9P6 203 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 PRO3102Q9H379 93 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 SPRR4Q96PI1 79 aa2.66□□□□□ -1.98
UBR1-208ENST00000569066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.65□□□□□ -1.982e-8■■■■■ 31.6
UBR1-208ENST00000569066 ODF3BA8MYP8 253 aa2.65□□□□□ -1.99
UBR1-208ENST00000569066 CELSR3Q9NYQ7 3312 aa2.65□□□□□ -1.99
UBR1-208ENST00000569066 KALRNO60229 2985 aa2.65□□□□□ -1.99
UBR1-208ENST00000569066 PATE1Q8WXA2 126 aa2.65□□□□□ -1.99
UBR1-208ENST00000569066 FAM215AQ9Y5M1 114 aa2.65□□□□□ -1.99
UBR1-208ENST00000569066 LOC400499M0QZD8 3231 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 A8MTW9 85 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 COX7BP24311 80 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 LINC00467Q9BRT7 94 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
UBR1-208ENST00000569066 CD52P31358 61 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 KRTAP26-1Q6PEX3 210 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 Q6ZQY7 126 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 CCL26Q9Y258 94 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 PIEZO2Q9H5I5 2752 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 OTOGQ6ZRI0 2925 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 IGKV3OR2-268A0A0C4DH90 116 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 ZZEF1O43149 2961 aa2.63□□□□□ -1.99
UBR1-208ENST00000569066 IGF2RP11717 2491 aa2.62□□□□□ -1.99
UBR1-208ENST00000569066 DEFB1P60022 68 aa2.62□□□□□ -1.99
UBR1-208ENST00000569066 CNOT1A5YKK6 2376 aaKnown RBP2.61□□□□□ -1.99
UBR1-208ENST00000569066 K7EQZ3 153 aa2.61□□□□□ -1.99
UBR1-208ENST00000569066 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
UBR1-208ENST00000569066 LINC00472Q9H8W2 130 aa2.61□□□□□ -1.99
UBR1-208ENST00000569066 IGKV3-7A0A075B6H7 116 aa2.61□□□□□ -1.99
UBR1-208ENST00000569066 CSMD1Q96PZ7 3565 aa2.6□□□□□ -1.99
UBR1-208ENST00000569066 SPTBN1Q01082 2364 aaKnown RBP2.6□□□□□ -1.99
UBR1-208ENST00000569066 DSPP15924 2871 aaKnown RBP2.6□□□□□ -1.99
UBR1-208ENST00000569066 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
UBR1-208ENST00000569066 A0A087WSZ3 146 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 MSMBP08118 114 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 TOMM7Q9P0U1 55 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 BAHCC1Q9P281 2608 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 GVINP1Q7Z2Y8 2422 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 H3BPC8 53 aa2.59□□□□□ -1.99
UBR1-208ENST00000569066 BOD1L1Q8NFC6 3051 aa2.58□□□□□ -2
UBR1-208ENST00000569066 MRPL33O75394 65 aaKnown RBP2.58□□□□□ -2
UBR1-208ENST00000569066 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
UBR1-208ENST00000569066 LAMA5O15230 3695 aa2.58□□□□□ -2
UBR1-208ENST00000569066 A0A087WTM6 91 aa2.58□□□□□ -2
UBR1-208ENST00000569066 CCL3L1P16619 93 aa2.58□□□□□ -2
UBR1-208ENST00000569066 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
UBR1-208ENST00000569066 ASH1LQ9NR48 2969 aaKnown RBP2.57□□□□□ -2
UBR1-208ENST00000569066 RELNP78509 3460 aa2.57□□□□□ -2
UBR1-208ENST00000569066 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
UBR1-208ENST00000569066 C1orf137Q5JT78 98 aa2.57□□□□□ -2
UBR1-208ENST00000569066 ZFHX2Q9C0A1 2572 aaPredicted RBP2.57□□□□□ -2
UBR1-208ENST00000569066 COL6A6A6NMZ7 2263 aa2.57□□□□□ -2
UBR1-208ENST00000569066 WFDC13Q8IUB5 93 aa2.56□□□□□ -2
UBR1-208ENST00000569066 FAM186AA6NE01 2351 aa2.56□□□□□ -2
UBR1-208ENST00000569066 ZFHX4Q86UP3 3567 aa2.56□□□□□ -2
UBR1-208ENST00000569066 NUPR2A6NF83 97 aa2.56□□□□□ -2
UBR1-208ENST00000569066 UQCR11O14957 56 aa2.56□□□□□ -2
UBR1-208ENST00000569066 CEP250Q9BV73 2442 aa2.55□□□□□ -2
UBR1-208ENST00000569066 PCOTHQ58A44 107 aa2.55□□□□□ -2
UBR1-208ENST00000569066 Q8IZM0 81 aa2.55□□□□□ -2
UBR1-208ENST00000569066 CHD6Q8TD26 2715 aa2.55□□□□□ -2
UBR1-208ENST00000569066 FLG2Q5D862 2391 aaPredicted RBP2.55□□□□□ -2
UBR1-208ENST00000569066 ZDBF2Q9HCK1 2354 aa2.55□□□□□ -2
UBR1-208ENST00000569066 WFDC10BQ8IUB3 73 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms