RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ERC2-IT1O76042 136 aa16.91■□□□□ 0.3
RAB40C-211ENST00000568586 TRAV23DV6A0A075B6W5 121 aa16.9■□□□□ 0.3
RAB40C-211ENST00000568586 SPANXCQ9NY87 97 aa16.9■□□□□ 0.3
RAB40C-211ENST00000568586 ZNF815PA8K554 130 aa16.89■□□□□ 0.29
RAB40C-211ENST00000568586 KRTDAPP60985 99 aa16.89■□□□□ 0.29
RAB40C-211ENST00000568586 PPDPFQ9H3Y8 114 aa16.88■□□□□ 0.29
RAB40C-211ENST00000568586 ZNF73O43830 326 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-211ENST00000568586 RETNLBQ9BQ08 111 aa16.87■□□□□ 0.29
RAB40C-211ENST00000568586 TTTY13Q9BZ97 58 aa16.86■□□□□ 0.29
RAB40C-211ENST00000568586 CBY1Q9Y3M2 126 aa16.86■□□□□ 0.29
RAB40C-211ENST00000568586 JOSD1Q15040 202 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-211ENST00000568586 GAGE2AQ6NT46 116 aa16.85■□□□□ 0.29
RAB40C-211ENST00000568586 Q8NBF4 154 aa16.83■□□□□ 0.28
RAB40C-211ENST00000568586 MUC2Q02817 5179 aa16.83■□□□□ 0.28
RAB40C-211ENST00000568586 C20orf202A1L168 122 aa16.82■□□□□ 0.28
RAB40C-211ENST00000568586 C5orf52A6NGY3 159 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 AKR1D1P51857 326 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 TPRXLQ17RH7 258 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 ANKRD39Q53RE8 183 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 C4orf48Q5BLP8 95 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 SPANXDQ9BXN6 97 aa16.79■□□□□ 0.28
RAB40C-211ENST00000568586 IGLV7-46A0A075B6I9 117 aa16.77■□□□□ 0.28
RAB40C-211ENST00000568586 SSBP3-AS1Q7Z2R9 100 aa16.77■□□□□ 0.28
RAB40C-211ENST00000568586 SPINK1P00995 79 aa16.76■□□□□ 0.27
RAB40C-211ENST00000568586 LINC00518Q8N0U6 118 aa16.76■□□□□ 0.27
RAB40C-211ENST00000568586 HINT1P49773 126 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-211ENST00000568586 OR13C6PQ8NH95 151 aa16.74■□□□□ 0.27
RAB40C-211ENST00000568586 MOBPQ13875 183 aa16.71■□□□□ 0.27
RAB40C-211ENST00000568586 SCGB1D4Q6XE38 83 aa16.71■□□□□ 0.27
RAB40C-211ENST00000568586 FP248Q71RG6 208 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-211ENST00000568586 ATOH7Q8N100 152 aa16.71■□□□□ 0.27
RAB40C-211ENST00000568586 Q6ZVH6 145 aa16.7■□□□□ 0.26
RAB40C-211ENST00000568586 IGLV9-49A0A0B4J1Y8 123 aa16.69■□□□□ 0.26
RAB40C-211ENST00000568586 IFITM1P13164 125 aa16.69■□□□□ 0.26
RAB40C-211ENST00000568586 S100A1P23297 94 aa16.69■□□□□ 0.26
RAB40C-211ENST00000568586 RPS29P62273 56 aaKnown RBP16.69■□□□□ 0.26
RAB40C-211ENST00000568586 SNRPEP62304 92 aaKnown RBP16.68■□□□□ 0.26
RAB40C-211ENST00000568586 HIST3H2BBQ8N257 126 aa16.68■□□□□ 0.26
RAB40C-211ENST00000568586 ST20-AS1Q8NBB2 130 aa16.68■□□□□ 0.26
RAB40C-211ENST00000568586 COPS9Q8WXC6 57 aa16.68■□□□□ 0.26
RAB40C-211ENST00000568586 PCP2Q8IVA1 136 aa16.67■□□□□ 0.26
RAB40C-211ENST00000568586 DHRS4-AS1Q9P1J3 65 aa16.67■□□□□ 0.26
RAB40C-211ENST00000568586 MUC17Q685J3 4493 aa16.65■□□□□ 0.26
RAB40C-211ENST00000568586 SPRR1BP22528 89 aa16.65■□□□□ 0.26
RAB40C-211ENST00000568586 HIST1H2BLQ99880 126 aa16.65■□□□□ 0.26
RAB40C-211ENST00000568586 ELOF1P60002 83 aaKnown RBP16.64■□□□□ 0.25
RAB40C-211ENST00000568586 CDIP1Q9H305 208 aa16.64■□□□□ 0.25
RAB40C-211ENST00000568586 TRBV7-6A0A0J9YX20 115 aa16.61■□□□□ 0.25
RAB40C-211ENST00000568586 C6orf99Q4VX62 202 aa16.61■□□□□ 0.25
RAB40C-211ENST00000568586 COX7BP24311 80 aa16.6■□□□□ 0.25
RAB40C-211ENST00000568586 MUSTN1Q8IVN3 82 aa16.59■□□□□ 0.25
RAB40C-211ENST00000568586 Q8N377 158 aa16.58■□□□□ 0.24
RAB40C-211ENST00000568586 S100A2P29034 98 aa16.57■□□□□ 0.24
RAB40C-211ENST00000568586 C9orf153Q5TBE3 101 aa16.55■□□□□ 0.24
RAB40C-211ENST00000568586 KRTAP13-3Q3SY46 172 aa16.54■□□□□ 0.24
RAB40C-211ENST00000568586 SLC25A34Q6PIV7 304 aa16.54■□□□□ 0.24
RAB40C-211ENST00000568586 SLC25A20O43772 301 aa16.52■□□□□ 0.24
RAB40C-211ENST00000568586 A0A1B0GWB2 263 aa16.5■□□□□ 0.23
RAB40C-211ENST00000568586 A6NDN8 102 aa16.5■□□□□ 0.23
RAB40C-211ENST00000568586 S100A6P06703 90 aa16.48■□□□□ 0.23
RAB40C-211ENST00000568586 TRAV13-2A0A0B4J235 113 aa16.47■□□□□ 0.23
RAB40C-211ENST00000568586 LAMTOR3Q9UHA4 124 aa16.47■□□□□ 0.23
RAB40C-211ENST00000568586 HSBP1L1C9JCN9 74 aa16.46■□□□□ 0.23
RAB40C-211ENST00000568586 A0A0U1RQV1 116 aa16.45■□□□□ 0.22
RAB40C-211ENST00000568586 A4D1N5 150 aa16.44■□□□□ 0.22
RAB40C-211ENST00000568586 TEX49A0A1B0GTD5 131 aa16.43■□□□□ 0.22
RAB40C-211ENST00000568586 TAL2Q16559 108 aa16.42■□□□□ 0.22
RAB40C-211ENST00000568586 IGLV5-48A0A075B6I7 105 aa16.41■□□□□ 0.22
RAB40C-211ENST00000568586 LINC01547P58512 204 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-211ENST00000568586 SMIM11BQ8TCY0 68 aa16.4■□□□□ 0.22
RAB40C-211ENST00000568586 SMIM29Q86T20 159 aa16.39■□□□□ 0.21
RAB40C-211ENST00000568586 DEFB105AQ8NG35 78 aa16.38■□□□□ 0.21
RAB40C-211ENST00000568586 FAT4Q6V0I7 4981 aa16.38■□□□□ 0.21
RAB40C-211ENST00000568586 CD164Q04900 197 aa16.35■□□□□ 0.21
RAB40C-211ENST00000568586 Q1RN00 199 aa16.34■□□□□ 0.21
RAB40C-211ENST00000568586 ASB16-AS1Q495Z4 193 aa16.33■□□□□ 0.2
RAB40C-211ENST00000568586 LIMD2Q9BT23 127 aa16.33■□□□□ 0.2
RAB40C-211ENST00000568586 PRO1933Q9H354 126 aa16.33■□□□□ 0.2
RAB40C-211ENST00000568586 NHP2Q9NX24 153 aaKnown RBP16.33■□□□□ 0.2
RAB40C-211ENST00000568586 SCGB1D1O95968 90 aa16.32■□□□□ 0.2
RAB40C-211ENST00000568586 COX8AP10176 69 aa16.27■□□□□ 0.2
RAB40C-211ENST00000568586 HRCT1Q6UXD1 115 aa16.27■□□□□ 0.2
RAB40C-211ENST00000568586 DLEU1O43261 78 aa16.26■□□□□ 0.19
RAB40C-211ENST00000568586 VAMP3Q15836 100 aa16.26■□□□□ 0.19
RAB40C-211ENST00000568586 Q5XG85 94 aa16.25■□□□□ 0.19
RAB40C-211ENST00000568586 XP32Q5T750 250 aa16.24■□□□□ 0.19
RAB40C-211ENST00000568586 LINC00575Q6W349 94 aa16.24■□□□□ 0.19
RAB40C-211ENST00000568586 LCE2AQ5TA79 106 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-211ENST00000568586 SEC61BP60468 96 aaKnown RBP16.22■□□□□ 0.19
RAB40C-211ENST00000568586 H7C2G1 150 aa16.21■□□□□ 0.19
RAB40C-211ENST00000568586 HIST1H4GQ99525 98 aa16.2■□□□□ 0.18
RAB40C-211ENST00000568586 hADV29S1A0JD25 119 aa16.15■□□□□ 0.18
RAB40C-211ENST00000568586 A0A0G2JQZ4 141 aa16.12■□□□□ 0.17
RAB40C-211ENST00000568586 Q6ZQY7 126 aa16.12■□□□□ 0.17
RAB40C-211ENST00000568586 KRTAP4-1Q9BYQ7 146 aa16.12■□□□□ 0.17
RAB40C-211ENST00000568586 HIGD1BQ9P298 99 aa16.12■□□□□ 0.17
RAB40C-211ENST00000568586 C12orf57Q99622 126 aa16.11■□□□□ 0.17
RAB40C-211ENST00000568586 C14orf144Q96I85 54 aa16.1■□□□□ 0.17
RAB40C-211ENST00000568586 BVES-AS1Q5T3Y7 98 aa16.09■□□□□ 0.17
RAB40C-211ENST00000568586 C1orf195Q5TG92 126 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 314.6 ms