RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 CBY1Q9Y3M2 126 aa4.16□□□□□ -1.74
SMPD3-210ENST00000567811 TIMM17BO60830 172 aa4.15□□□□□ -1.75
SMPD3-210ENST00000567811 HINT1P49773 126 aaPredicted RBP4.15□□□□□ -1.75
SMPD3-210ENST00000567811 KRTDAPP60985 99 aa4.15□□□□□ -1.75
SMPD3-210ENST00000567811 JOSD1Q15040 202 aaPredicted RBP4.15□□□□□ -1.75
SMPD3-210ENST00000567811 GAGE2AQ6NT46 116 aa4.15□□□□□ -1.75
SMPD3-210ENST00000567811 LINC00308Q8TCZ7 52 aa4.15□□□□□ -1.75
SMPD3-210ENST00000567811 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 Q6ZRX8 168 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 LINC00518Q8N0U6 118 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 OR13C6PQ8NH95 151 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 LITAFQ99732 161 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 RETNLBQ9BQ08 111 aa4.14□□□□□ -1.75
SMPD3-210ENST00000567811 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 TRAV23DV6A0A075B6W5 121 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 C20orf202A1L168 122 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 ZNF73O43830 326 aaPredicted RBP4.13□□□□□ -1.75
SMPD3-210ENST00000567811 AKR1D1P51857 326 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 LINC00483Q53H64 154 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 Q9BRP9 147 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
SMPD3-210ENST00000567811 C5orf52A6NGY3 159 aa4.12□□□□□ -1.75
SMPD3-210ENST00000567811 SPINK1P00995 79 aa4.12□□□□□ -1.75
SMPD3-210ENST00000567811 Q8NBF4 154 aa4.12□□□□□ -1.75
SMPD3-210ENST00000567811 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
SMPD3-210ENST00000567811 S100A1P23297 94 aa4.11□□□□□ -1.75
SMPD3-210ENST00000567811 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
SMPD3-210ENST00000567811 COPS9Q8WXC6 57 aa4.11□□□□□ -1.75
SMPD3-210ENST00000567811 IFITM1P13164 125 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
SMPD3-210ENST00000567811 ANKRD39Q53RE8 183 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 Q6ZVH6 145 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 ATOH7Q8N100 152 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 CDIP1Q9H305 208 aa4.1□□□□□ -1.75
SMPD3-210ENST00000567811 S100A2P29034 98 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 MOBPQ13875 183 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
SMPD3-210ENST00000567811 MUSTN1Q8IVN3 82 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 ST20-AS1Q8NBB2 130 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.75
SMPD3-210ENST00000567811 COX7BP24311 80 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 TAL2Q16559 108 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 SLC25A34Q6PIV7 304 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 PCP2Q8IVA1 136 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
SMPD3-210ENST00000567811 TRBV7-6A0A0J9YX20 115 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 A6NDN8 102 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 S100A6P06703 90 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 SPRR1BP22528 89 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
SMPD3-210ENST00000567811 C6orf99Q4VX62 202 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 C9orf153Q5TBE3 101 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 HIST1H2BLQ99880 126 aa4.07□□□□□ -1.76
SMPD3-210ENST00000567811 HSBP1L1C9JCN9 74 aa4.06□□□□□ -1.76
SMPD3-210ENST00000567811 SLC25A20O43772 301 aa4.06□□□□□ -1.76
SMPD3-210ENST00000567811 ELOF1P60002 83 aaKnown RBP4.06□□□□□ -1.76
SMPD3-210ENST00000567811 DEFB105AQ8NG35 78 aa4.06□□□□□ -1.76
SMPD3-210ENST00000567811 LAMTOR3Q9UHA4 124 aa4.06□□□□□ -1.76
SMPD3-210ENST00000567811 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
SMPD3-210ENST00000567811 Q8N377 158 aa4.05□□□□□ -1.76
SMPD3-210ENST00000567811 A0A0U1RQV1 116 aa4.04□□□□□ -1.76
SMPD3-210ENST00000567811 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
SMPD3-210ENST00000567811 A0A1B0GWB2 263 aa4.04□□□□□ -1.76
SMPD3-210ENST00000567811 A4D1N5 150 aa4.04□□□□□ -1.76
SMPD3-210ENST00000567811 SCGB1D1O95968 90 aa4.04□□□□□ -1.76
SMPD3-210ENST00000567811 VAMP3Q15836 100 aa4.03□□□□□ -1.76
SMPD3-210ENST00000567811 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
SMPD3-210ENST00000567811 SMIM11BQ8TCY0 68 aa4.03□□□□□ -1.76
SMPD3-210ENST00000567811 PRO1933Q9H354 126 aa4.03□□□□□ -1.76
SMPD3-210ENST00000567811 Q1RN00 199 aa4.02□□□□□ -1.77
SMPD3-210ENST00000567811 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
SMPD3-210ENST00000567811 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
SMPD3-210ENST00000567811 CD164Q04900 197 aa4.01□□□□□ -1.77
SMPD3-210ENST00000567811 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
SMPD3-210ENST00000567811 IGLV5-48A0A075B6I7 105 aa4□□□□□ -1.77
SMPD3-210ENST00000567811 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
SMPD3-210ENST00000567811 LIMD2Q9BT23 127 aa4□□□□□ -1.77
SMPD3-210ENST00000567811 H7C2G1 150 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 DLEU1O43261 78 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 COX8AP10176 69 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
SMPD3-210ENST00000567811 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 HIST1H4GQ99525 98 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
SMPD3-210ENST00000567811 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
SMPD3-210ENST00000567811 MUC2Q02817 5179 aa3.97□□□□□ -1.77
SMPD3-210ENST00000567811 Q5XG85 94 aa3.97□□□□□ -1.77
SMPD3-210ENST00000567811 C14orf144Q96I85 54 aa3.97□□□□□ -1.77
SMPD3-210ENST00000567811 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
SMPD3-210ENST00000567811 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
SMPD3-210ENST00000567811 XP32Q5T750 250 aa3.96□□□□□ -1.78
SMPD3-210ENST00000567811 F8WEM9 126 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms