RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 Q8NAQ8 132 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 A8MWP4 228 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 Q5XG85 94 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 SZT2Q5T011 3432 aa8.23□□□□□ -1.09
CSPG4P13-202ENST00000567704 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
CSPG4P13-202ENST00000567704 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
CSPG4P13-202ENST00000567704 UNC80Q8N2C7 3258 aa8.21□□□□□ -1.09
CSPG4P13-202ENST00000567704 H3BNG1 76 aa8.21□□□□□ -1.1
CSPG4P13-202ENST00000567704 GIG44P09565 113 aaPredicted RBP8.21□□□□□ -1.1
CSPG4P13-202ENST00000567704 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
CSPG4P13-202ENST00000567704 KTN1-AS1Q86SY8 53 aa8.2□□□□□ -1.1
CSPG4P13-202ENST00000567704 LY6G6CO95867 125 aa8.2□□□□□ -1.1
CSPG4P13-202ENST00000567704 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
CSPG4P13-202ENST00000567704 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
CSPG4P13-202ENST00000567704 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
CSPG4P13-202ENST00000567704 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
CSPG4P13-202ENST00000567704 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
CSPG4P13-202ENST00000567704 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
CSPG4P13-202ENST00000567704 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
CSPG4P13-202ENST00000567704 A0A096LNT2 108 aa8.15□□□□□ -1.1
CSPG4P13-202ENST00000567704 TRIOO75962 3097 aa8.15□□□□□ -1.1
CSPG4P13-202ENST00000567704 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
CSPG4P13-202ENST00000567704 FP248Q71RG6 208 aaPredicted RBP8.14□□□□□ -1.11
CSPG4P13-202ENST00000567704 C15orf56Q8N910 161 aa8.14□□□□□ -1.11
CSPG4P13-202ENST00000567704 AKAP13Q12802 2813 aa8.14□□□□□ -1.11
CSPG4P13-202ENST00000567704 MRPL34Q9BQ48 92 aaKnown RBP8.14□□□□□ -1.11
CSPG4P13-202ENST00000567704 NUPR2A6NF83 97 aa8.13□□□□□ -1.11
CSPG4P13-202ENST00000567704 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
CSPG4P13-202ENST00000567704 C19orf73Q9NVV2 129 aa8.12□□□□□ -1.11
CSPG4P13-202ENST00000567704 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
CSPG4P13-202ENST00000567704 CENPEQ02224 2701 aa8.12□□□□□ -1.11
CSPG4P13-202ENST00000567704 OXTP01178 125 aa8.11□□□□□ -1.11
CSPG4P13-202ENST00000567704 UQCR11O14957 56 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 FAM229BQ4G0N7 80 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 LCA10Q71F78 164 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 Q1T7F1 81 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 LINC00313P59037 77 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 MDFIQ99750 246 aa8.1□□□□□ -1.11
CSPG4P13-202ENST00000567704 CR1P17927 2039 aa8.09□□□□□ -1.11
CSPG4P13-202ENST00000567704 LINC00612Q8N6U2 182 aa8.09□□□□□ -1.11
CSPG4P13-202ENST00000567704 C8orf17Q9NRJ1 99 aa8.09□□□□□ -1.11
CSPG4P13-202ENST00000567704 DNAH10OSP0CZ25 163 aa8.09□□□□□ -1.12
CSPG4P13-202ENST00000567704 MGAM2Q2M2H8 2515 aa8.09□□□□□ -1.12
CSPG4P13-202ENST00000567704 COL6A3P12111 3177 aa8.08□□□□□ -1.12
CSPG4P13-202ENST00000567704 XIRP2A4UGR9 3374 aa8.08□□□□□ -1.12
CSPG4P13-202ENST00000567704 IGLV5-48A0A075B6I7 105 aa8.06□□□□□ -1.12
CSPG4P13-202ENST00000567704 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
CSPG4P13-202ENST00000567704 FREM2Q5SZK8 3169 aa8.06□□□□□ -1.12
CSPG4P13-202ENST00000567704 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
CSPG4P13-202ENST00000567704 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
CSPG4P13-202ENST00000567704 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
CSPG4P13-202ENST00000567704 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
CSPG4P13-202ENST00000567704 CHD6Q8TD26 2715 aa8.03□□□□□ -1.12
CSPG4P13-202ENST00000567704 DSCR10P59022 87 aa8.03□□□□□ -1.12
CSPG4P13-202ENST00000567704 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
CSPG4P13-202ENST00000567704 SPTBN5Q9NRC6 3674 aaKnown RBP8.01□□□□□ -1.13
CSPG4P13-202ENST00000567704 ATRQ13535 2644 aa8.01□□□□□ -1.13
CSPG4P13-202ENST00000567704 MGAQ8IWI9 3026 aa8.01□□□□□ -1.13
CSPG4P13-202ENST00000567704 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
CSPG4P13-202ENST00000567704 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
CSPG4P13-202ENST00000567704 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
CSPG4P13-202ENST00000567704 FLNAP21333 2647 aaKnown RBP7.99□□□□□ -1.13
CSPG4P13-202ENST00000567704 Q8NDZ9 215 aa7.99□□□□□ -1.13
CSPG4P13-202ENST00000567704 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
CSPG4P13-202ENST00000567704 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
CSPG4P13-202ENST00000567704 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
CSPG4P13-202ENST00000567704 MAP1AP78559 2803 aaPredicted RBP7.98□□□□□ -1.13
CSPG4P13-202ENST00000567704 REV3LO60673 3130 aa7.98□□□□□ -1.13
CSPG4P13-202ENST00000567704 WDFY4Q6ZS81 3184 aa7.98□□□□□ -1.13
CSPG4P13-202ENST00000567704 FLNBO75369 2602 aaKnown RBP7.97□□□□□ -1.13
CSPG4P13-202ENST00000567704 HECTD1Q9ULT8 2610 aa7.96□□□□□ -1.14
CSPG4P13-202ENST00000567704 CASC10Q5T4H9 136 aa7.96□□□□□ -1.14
CSPG4P13-202ENST00000567704 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 NBEAQ8NFP9 2946 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 RTL8CO15255 209 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 Q96NJ1 140 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
CSPG4P13-202ENST00000567704 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
CSPG4P13-202ENST00000567704 ANAPC11Q9NYG5 84 aa7.93□□□□□ -1.14
CSPG4P13-202ENST00000567704 FRYQ5TBA9 3013 aa7.93□□□□□ -1.14
CSPG4P13-202ENST00000567704 ITPR3Q14573 2671 aa7.92□□□□□ -1.14
CSPG4P13-202ENST00000567704 Q75L30 129 aa7.91□□□□□ -1.14
CSPG4P13-202ENST00000567704 DSPP15924 2871 aaKnown RBP7.9□□□□□ -1.14
CSPG4P13-202ENST00000567704 MAST4O15021 2626 aa7.9□□□□□ -1.14
CSPG4P13-202ENST00000567704 KRTAP10-3P60369 221 aa7.9□□□□□ -1.14
CSPG4P13-202ENST00000567704 EYSQ5T1H1 3165 aa7.9□□□□□ -1.14
CSPG4P13-202ENST00000567704 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.15
CSPG4P13-202ENST00000567704 GCN1Q92616 2671 aaKnown RBP7.89□□□□□ -1.15
CSPG4P13-202ENST00000567704 Q5VV11 94 aa7.89□□□□□ -1.15
CSPG4P13-202ENST00000567704 TYMSOSQ8TAI1 123 aa7.88□□□□□ -1.15
CSPG4P13-202ENST00000567704 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
CSPG4P13-202ENST00000567704 HELZ2Q9BYK8 2649 aaKnown RBP7.87□□□□□ -1.15
CSPG4P13-202ENST00000567704 UNC79Q9P2D8 2635 aa7.87□□□□□ -1.15
CSPG4P13-202ENST00000567704 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
CSPG4P13-202ENST00000567704 VCANP13611 3396 aa7.86□□□□□ -1.15
CSPG4P13-202ENST00000567704 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms