RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 H0Y9J4 135 aa5.78□□□□□ -1.48
CAPN3-216ENST00000567071 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
CAPN3-216ENST00000567071 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
CAPN3-216ENST00000567071 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
CAPN3-216ENST00000567071 XAGE1AQ9HD64 81 aa5.78□□□□□ -1.48
CAPN3-216ENST00000567071 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-216ENST00000567071 TLX1NBP0CAT3 122 aa5.77□□□□□ -1.49
CAPN3-216ENST00000567071 DDTP30046 118 aa5.77□□□□□ -1.49
CAPN3-216ENST00000567071 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
CAPN3-216ENST00000567071 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
CAPN3-216ENST00000567071 SPANXCQ9NY87 97 aa5.77□□□□□ -1.49
CAPN3-216ENST00000567071 CTAG1AP78358 180 aa5.76□□□□□ -1.49
CAPN3-216ENST00000567071 MUSTN1Q8IVN3 82 aa5.76□□□□□ -1.49
CAPN3-216ENST00000567071 LINC00308Q8TCZ7 52 aa5.76□□□□□ -1.49
CAPN3-216ENST00000567071 H3BS24 57 aa5.75□□□□□ -1.49
CAPN3-216ENST00000567071 PTTG1IPP53801 180 aa5.75□□□□□ -1.49
CAPN3-216ENST00000567071 HSD52Q0P140 79 aa5.75□□□□□ -1.49
CAPN3-216ENST00000567071 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
CAPN3-216ENST00000567071 FAM168BA1KXE4 195 aa5.74□□□□□ -1.49
CAPN3-216ENST00000567071 IGLV7-43P04211 117 aa5.74□□□□□ -1.49
CAPN3-216ENST00000567071 Q6ZVH6 145 aa5.74□□□□□ -1.49
CAPN3-216ENST00000567071 CEND1Q8N111 149 aa5.74□□□□□ -1.49
CAPN3-216ENST00000567071 IFITM1P13164 125 aa5.73□□□□□ -1.49
CAPN3-216ENST00000567071 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-216ENST00000567071 FXYD2P54710 66 aa5.73□□□□□ -1.49
CAPN3-216ENST00000567071 TAL2Q16559 108 aa5.73□□□□□ -1.49
CAPN3-216ENST00000567071 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-216ENST00000567071 Q8NDZ9 215 aa5.73□□□□□ -1.49
CAPN3-216ENST00000567071 A4D1N5 150 aa5.72□□□□□ -1.49
CAPN3-216ENST00000567071 NCR3O14931 201 aa5.72□□□□□ -1.49
CAPN3-216ENST00000567071 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
CAPN3-216ENST00000567071 RPL24P83731 157 aaKnown RBP5.72□□□□□ -1.49
CAPN3-216ENST00000567071 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
CAPN3-216ENST00000567071 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 LOC107984156A0A0G2JMH3 177 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 M0R143 59 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 BATFQ16520 125 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 BVES-AS1Q5T3Y7 98 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 ARL17AQ8IVW1 177 aa5.71□□□□□ -1.5
CAPN3-216ENST00000567071 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
CAPN3-216ENST00000567071 VPREB1P12018 145 aa5.7□□□□□ -1.5
CAPN3-216ENST00000567071 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
CAPN3-216ENST00000567071 RETNLBQ9BQ08 111 aa5.7□□□□□ -1.5
CAPN3-216ENST00000567071 NHP2Q9NX24 153 aaKnown RBP5.7□□□□□ -1.5
CAPN3-216ENST00000567071 K7ERJ3 54 aa5.69□□□□□ -1.5
CAPN3-216ENST00000567071 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
CAPN3-216ENST00000567071 NKAPP1Q8N9T2 125 aa5.69□□□□□ -1.5
CAPN3-216ENST00000567071 PPDPFQ9H3Y8 114 aa5.69□□□□□ -1.5
CAPN3-216ENST00000567071 IGKV2-28A0A075B6P5 120 aa5.68□□□□□ -1.5
CAPN3-216ENST00000567071 GAGE10A6NGK3 116 aa5.68□□□□□ -1.5
CAPN3-216ENST00000567071 M0QXV9 152 aa5.68□□□□□ -1.5
CAPN3-216ENST00000567071 NDUFC2O95298 119 aa5.68□□□□□ -1.5
CAPN3-216ENST00000567071 IGKV2D-28P01615 120 aa5.68□□□□□ -1.5
CAPN3-216ENST00000567071 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 OR13C6PQ8NH95 151 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 RAB37Q96AX2 223 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 SNHG12Q9BXW3 62 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 C22orf24Q9Y442 160 aa5.67□□□□□ -1.5
CAPN3-216ENST00000567071 IGLV5-37A0A075B6J1 123 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 A6NDN8 102 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 H7C2G1 150 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 M0R378 163 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 CFC1P0CG37 223 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
CAPN3-216ENST00000567071 S100A7L2Q5SY68 101 aa5.66□□□□□ -1.5
CAPN3-216ENST00000567071 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
CAPN3-216ENST00000567071 MRPL55Q7Z7F7 128 aaKnown RBP5.66□□□□□ -1.5
CAPN3-216ENST00000567071 A0A0B4J2C4 111 aa5.65□□□□□ -1.5
CAPN3-216ENST00000567071 TRBV10-3A0A0K0K1G6 114 aa5.65□□□□□ -1.5
CAPN3-216ENST00000567071 TRBV10-2A0A0K0K1G8 114 aa5.65□□□□□ -1.5
CAPN3-216ENST00000567071 RPL37AP8A6NKH3 93 aa5.65□□□□□ -1.5
CAPN3-216ENST00000567071 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-216ENST00000567071 TYMSOSQ8TAI1 123 aa5.65□□□□□ -1.5
CAPN3-216ENST00000567071 TRAV13-2A0A0B4J235 113 aa5.64□□□□□ -1.51
CAPN3-216ENST00000567071 A0A1B0GWB2 263 aa5.64□□□□□ -1.51
CAPN3-216ENST00000567071 Q1RN00 199 aa5.64□□□□□ -1.51
CAPN3-216ENST00000567071 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
CAPN3-216ENST00000567071 UBE2BP63146 152 aa5.63□□□□□ -1.51
CAPN3-216ENST00000567071 MT1HP80294 61 aa5.63□□□□□ -1.51
CAPN3-216ENST00000567071 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
CAPN3-216ENST00000567071 M0R2T5 61 aa5.62□□□□□ -1.51
CAPN3-216ENST00000567071 IGLV6-57P01721 117 aa5.62□□□□□ -1.51
CAPN3-216ENST00000567071 LBHQ53QV2 105 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-216ENST00000567071 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
CAPN3-216ENST00000567071 TRAV23DV6A0A075B6W5 121 aa5.61□□□□□ -1.51
CAPN3-216ENST00000567071 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
CAPN3-216ENST00000567071 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
CAPN3-216ENST00000567071 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
CAPN3-216ENST00000567071 TMEM126AQ9H061 195 aa5.61□□□□□ -1.51
CAPN3-216ENST00000567071 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
CAPN3-216ENST00000567071 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-216ENST00000567071 PRYO14603 147 aa5.59□□□□□ -1.51
CAPN3-216ENST00000567071 TAX1BP3O14907 124 aa5.59□□□□□ -1.51
CAPN3-216ENST00000567071 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
CAPN3-216ENST00000567071 PSMB2P49721 201 aa5.58□□□□□ -1.52
CAPN3-216ENST00000567071 C6orf99Q4VX62 202 aa5.58□□□□□ -1.52
CAPN3-216ENST00000567071 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
CAPN3-216ENST00000567071 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms