RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 COX6CP09669 75 aa8.39□□□□□ -1.07
CLK3-218ENST00000566926 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
CLK3-218ENST00000566926 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
CLK3-218ENST00000566926 A0A1W2PNN7 141 aa8.38□□□□□ -1.07
CLK3-218ENST00000566926 H3BUT2 72 aa8.38□□□□□ -1.07
CLK3-218ENST00000566926 FABP2P12104 132 aa8.38□□□□□ -1.07
CLK3-218ENST00000566926 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 H7C2G1 150 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 NCR3O14931 201 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 IGLV6-57P01721 117 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 PSMB2P49721 201 aa8.37□□□□□ -1.07
CLK3-218ENST00000566926 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
CLK3-218ENST00000566926 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
CLK3-218ENST00000566926 Q8NDZ9 215 aa8.35□□□□□ -1.07
CLK3-218ENST00000566926 TRBV20-1A0A075B6N2 111 aa8.34□□□□□ -1.07
CLK3-218ENST00000566926 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
CLK3-218ENST00000566926 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
CLK3-218ENST00000566926 VAMP3Q15836 100 aa8.33□□□□□ -1.08
CLK3-218ENST00000566926 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
CLK3-218ENST00000566926 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
CLK3-218ENST00000566926 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
CLK3-218ENST00000566926 SMIM11BQ8TCY0 68 aa8.33□□□□□ -1.08
CLK3-218ENST00000566926 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
CLK3-218ENST00000566926 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
CLK3-218ENST00000566926 H0YGX0 51 aa8.32□□□□□ -1.08
CLK3-218ENST00000566926 TRIAP1O43715 76 aa8.32□□□□□ -1.08
CLK3-218ENST00000566926 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
CLK3-218ENST00000566926 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
CLK3-218ENST00000566926 TRBV7-6A0A0J9YX20 115 aa8.31□□□□□ -1.08
CLK3-218ENST00000566926 M0QXV9 152 aa8.31□□□□□ -1.08
CLK3-218ENST00000566926 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
CLK3-218ENST00000566926 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
CLK3-218ENST00000566926 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
CLK3-218ENST00000566926 A0A1B0GV90 55 aa8.3□□□□□ -1.08
CLK3-218ENST00000566926 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
CLK3-218ENST00000566926 SNCGO76070 127 aa8.3□□□□□ -1.08
CLK3-218ENST00000566926 NAA38Q9BRA0 125 aaKnown RBP8.3□□□□□ -1.08
CLK3-218ENST00000566926 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
CLK3-218ENST00000566926 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
CLK3-218ENST00000566926 K7EP34 96 aa8.29□□□□□ -1.08
CLK3-218ENST00000566926 PRYO14603 147 aa8.29□□□□□ -1.08
CLK3-218ENST00000566926 DIRC1Q969H9 104 aa8.29□□□□□ -1.08
CLK3-218ENST00000566926 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
CLK3-218ENST00000566926 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
CLK3-218ENST00000566926 UBE2BP63146 152 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 REG3GQ6UW15 175 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
CLK3-218ENST00000566926 A0A1B0GX51 115 aa8.27□□□□□ -1.09
CLK3-218ENST00000566926 C6orf99Q4VX62 202 aa8.27□□□□□ -1.09
CLK3-218ENST00000566926 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
CLK3-218ENST00000566926 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
CLK3-218ENST00000566926 LST1O00453 97 aa8.25□□□□□ -1.09
CLK3-218ENST00000566926 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
CLK3-218ENST00000566926 TCL1BO95988 128 aa8.24□□□□□ -1.09
CLK3-218ENST00000566926 TRACP01848 142 aa8.24□□□□□ -1.09
CLK3-218ENST00000566926 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
CLK3-218ENST00000566926 SLC25A20O43772 301 aa8.23□□□□□ -1.09
CLK3-218ENST00000566926 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
CLK3-218ENST00000566926 SPRR1AP35321 89 aa8.23□□□□□ -1.09
CLK3-218ENST00000566926 ELOF1P60002 83 aaKnown RBP8.23□□□□□ -1.09
CLK3-218ENST00000566926 HERC1Q15751 4861 aa8.23□□□□□ -1.09
CLK3-218ENST00000566926 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
CLK3-218ENST00000566926 COX7BP24311 80 aa8.22□□□□□ -1.09
CLK3-218ENST00000566926 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
CLK3-218ENST00000566926 DNAL4O96015 105 aa8.21□□□□□ -1.1
CLK3-218ENST00000566926 GHRHP01286 108 aa8.21□□□□□ -1.1
CLK3-218ENST00000566926 ETDCA0A1B0GVM5 59 aa8.2□□□□□ -1.1
CLK3-218ENST00000566926 H3BMG7 143 aa8.2□□□□□ -1.1
CLK3-218ENST00000566926 CLEC2BQ92478 149 aa8.2□□□□□ -1.1
CLK3-218ENST00000566926 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
CLK3-218ENST00000566926 H3BQ85 93 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 LINC00575Q6W349 94 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 Q6ZRX8 168 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
CLK3-218ENST00000566926 F8W1H4 67 aa8.18□□□□□ -1.1
CLK3-218ENST00000566926 hADV29S1A0JD25 119 aa8.17□□□□□ -1.1
CLK3-218ENST00000566926 H0Y9J4 135 aa8.17□□□□□ -1.1
CLK3-218ENST00000566926 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
CLK3-218ENST00000566926 B5MCH6 92 aa8.16□□□□□ -1.1
CLK3-218ENST00000566926 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
CLK3-218ENST00000566926 C9JAW5 83 aa8.15□□□□□ -1.1
CLK3-218ENST00000566926 H3BT86 120 aa8.15□□□□□ -1.1
CLK3-218ENST00000566926 BCE1O60756 84 aa8.15□□□□□ -1.1
CLK3-218ENST00000566926 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
CLK3-218ENST00000566926 ZNF861PO60384 105 aa8.14□□□□□ -1.11
CLK3-218ENST00000566926 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
CLK3-218ENST00000566926 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
CLK3-218ENST00000566926 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
CLK3-218ENST00000566926 ANKRD29Q8N6D5 301 aa8.12□□□□□ -1.11
CLK3-218ENST00000566926 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
CLK3-218ENST00000566926 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
CLK3-218ENST00000566926 UBE2AP49459 152 aa8.11□□□□□ -1.11
CLK3-218ENST00000566926 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
CLK3-218ENST00000566926 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms