RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
USB1-212ENST00000566082 ESRGQ1W209 222 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 SMIM29Q86T20 159 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.11□□□□□ -1.27
USB1-212ENST00000566082 H7BZZ5 65 aa7.11□□□□□ -1.27
USB1-212ENST00000566082 LINC00474Q9P2X8 69 aa7.1□□□□□ -1.27
USB1-212ENST00000566082 UNC79Q9P2D8 2635 aa7.1□□□□□ -1.27
USB1-212ENST00000566082 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
USB1-212ENST00000566082 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
USB1-212ENST00000566082 C7orf33Q8WU49 177 aa7.09□□□□□ -1.27
USB1-212ENST00000566082 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
USB1-212ENST00000566082 LINC00336Q6ZUF6 198 aa7.08□□□□□ -1.28
USB1-212ENST00000566082 FLNBO75369 2602 aaKnown RBP7.07□□□□□ -1.28
USB1-212ENST00000566082 A0A087WSZ3 146 aa7.07□□□□□ -1.28
USB1-212ENST00000566082 VPREB1P12018 145 aa7.07□□□□□ -1.28
USB1-212ENST00000566082 LINC00167Q96N53 147 aa7.07□□□□□ -1.28
USB1-212ENST00000566082 IGSF10Q6WRI0 2623 aa7.07□□□□□ -1.28
USB1-212ENST00000566082 Q8NAQ8 132 aa7.05□□□□□ -1.28
USB1-212ENST00000566082 CHKB-CPT1BH3BT56 60 aa7.04□□□□□ -1.28
USB1-212ENST00000566082 Q6ZRP5 223 aa7.04□□□□□ -1.28
USB1-212ENST00000566082 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
USB1-212ENST00000566082 IGKV4-1P06312 121 aa7.03□□□□□ -1.28
USB1-212ENST00000566082 ST20-AS1Q8NBB2 130 aa7.03□□□□□ -1.28
USB1-212ENST00000566082 PRLHP81277 87 aa7.03□□□□□ -1.28
USB1-212ENST00000566082 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
USB1-212ENST00000566082 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
USB1-212ENST00000566082 CR1P17927 2039 aa7.03□□□□□ -1.28
USB1-212ENST00000566082 REG3GQ6UW15 175 aa7.02□□□□□ -1.28
USB1-212ENST00000566082 Q8NDZ9 215 aa7.02□□□□□ -1.28
USB1-212ENST00000566082 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
USB1-212ENST00000566082 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
USB1-212ENST00000566082 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
USB1-212ENST00000566082 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
USB1-212ENST00000566082 SETXQ7Z333 2677 aaKnown RBP7.01□□□□□ -1.29
USB1-212ENST00000566082 A6NED7 52 aa7.01□□□□□ -1.29
USB1-212ENST00000566082 FBN2P35556 2912 aa7□□□□□ -1.29
USB1-212ENST00000566082 Q8NBF4 154 aa7□□□□□ -1.29
USB1-212ENST00000566082 PRR34Q9NV39 138 aa7□□□□□ -1.29
USB1-212ENST00000566082 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
USB1-212ENST00000566082 NF1P21359 2839 aa7□□□□□ -1.29
USB1-212ENST00000566082 NBPF19A0A087WUL8 3843 aa7□□□□□ -1.29
USB1-212ENST00000566082 OXTP01178 125 aa7□□□□□ -1.29
USB1-212ENST00000566082 PMAIP1Q13794 54 aa7□□□□□ -1.29
USB1-212ENST00000566082 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
USB1-212ENST00000566082 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
USB1-212ENST00000566082 SERTAD4-AS1Q5TG53 156 aa6.99□□□□□ -1.29
USB1-212ENST00000566082 Q6ZRX8 168 aa6.99□□□□□ -1.29
USB1-212ENST00000566082 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
USB1-212ENST00000566082 Q9BRP9 147 aa6.98□□□□□ -1.29
USB1-212ENST00000566082 H0Y9P7 68 aa6.98□□□□□ -1.29
USB1-212ENST00000566082 FAM168BA1KXE4 195 aa6.97□□□□□ -1.29
USB1-212ENST00000566082 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
USB1-212ENST00000566082 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
USB1-212ENST00000566082 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
USB1-212ENST00000566082 Q5XG85 94 aa6.97□□□□□ -1.29
USB1-212ENST00000566082 K7EQZ3 153 aa6.96□□□□□ -1.29
USB1-212ENST00000566082 Q8N377 158 aa6.96□□□□□ -1.29
USB1-212ENST00000566082 MAST4O15021 2626 aa6.96□□□□□ -1.3
USB1-212ENST00000566082 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.3
USB1-212ENST00000566082 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 KRTAP10-3P60369 221 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
USB1-212ENST00000566082 F8WDY8 70 aa6.94□□□□□ -1.3
USB1-212ENST00000566082 HELZ2Q9BYK8 2649 aaKnown RBP6.94□□□□□ -1.3
USB1-212ENST00000566082 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
USB1-212ENST00000566082 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
USB1-212ENST00000566082 KRTAP1-3Q8IUG1 177 aa6.94□□□□□ -1.3
USB1-212ENST00000566082 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
USB1-212ENST00000566082 TEP1Q99973 2627 aaKnown RBP6.92□□□□□ -1.3
USB1-212ENST00000566082 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
USB1-212ENST00000566082 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
USB1-212ENST00000566082 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
USB1-212ENST00000566082 A0A1B0GW54 56 aa6.9□□□□□ -1.3
USB1-212ENST00000566082 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
USB1-212ENST00000566082 H3BNG1 76 aa6.9□□□□□ -1.31
USB1-212ENST00000566082 WIPF1O43516 503 aa6.9□□□□□ -1.31
USB1-212ENST00000566082 MXRA5Q9NR99 2828 aa6.89□□□□□ -1.31
USB1-212ENST00000566082 A8MUN3 132 aa6.89□□□□□ -1.31
USB1-212ENST00000566082 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
USB1-212ENST00000566082 OCR1Q9BZK8 76 aa6.89□□□□□ -1.31
USB1-212ENST00000566082 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
USB1-212ENST00000566082 SEC61GP60059 68 aa6.88□□□□□ -1.31
USB1-212ENST00000566082 IGLV1-50A0A075B6I6 118 aa6.88□□□□□ -1.31
USB1-212ENST00000566082 LINC00588Q9Y4M8 146 aa6.86□□□□□ -1.31
USB1-212ENST00000566082 APCP25054 2843 aa6.85□□□□□ -1.31
USB1-212ENST00000566082 KRTAP1-1Q07627 177 aa6.85□□□□□ -1.31
USB1-212ENST00000566082 ZNF469Q96JG9 3925 aaPredicted RBP6.85□□□□□ -1.31
USB1-212ENST00000566082 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
USB1-212ENST00000566082 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
USB1-212ENST00000566082 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
USB1-212ENST00000566082 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
USB1-212ENST00000566082 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
USB1-212ENST00000566082 CHTF8P0CG12 524 aa6.83□□□□□ -1.32
USB1-212ENST00000566082 LIMD2Q9BT23 127 aa6.83□□□□□ -1.32
USB1-212ENST00000566082 IGLV5-48A0A075B6I7 105 aa6.83□□□□□ -1.32
USB1-212ENST00000566082 CASC10Q5T4H9 136 aa6.83□□□□□ -1.32
USB1-212ENST00000566082 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms