RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 CSAG1Q6PB30 78 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 C1orf64Q8NEQ6 169 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 SYCNQ0VAF6 134 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 ZNF702PQ9H963 129 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 IGLV1-51P01701 117 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 Q8NDZ9 215 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 PRO3102Q9H379 93 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 COA5Q86WW8 74 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 LINC00612Q8N6U2 182 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 SPINK6Q6UWN8 80 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 LINC01556Q5JQF7 62 aa1.97□□□□□ -2.09
CHD9-218ENST00000566029 DEFB131BA0A096LNP1 70 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 KRTAP16-1A8MUX0 517 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 C16orf90A8MZG2 172 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 CRIPTQ9P021 101 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 Q8NBF4 154 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 CHD8Q9HCK8 2581 aa1.96□□□□□ -2.1
CHD9-218ENST00000566029 CHCHD10Q8WYQ3 142 aaPredicted RBP1.96□□□□□ -2.1
CHD9-218ENST00000566029 A8MU10 97 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 Q5VV11 94 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 C8orf17Q9NRJ1 99 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 TRANK1O15050 2925 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 CYSRT1A8MQ03 144 aa1.95□□□□□ -2.1
CHD9-218ENST00000566029 PLAC8Q9NZF1 115 aa1.94□□□□□ -2.1
CHD9-218ENST00000566029 KPRPQ5T749 579 aaPredicted RBP1.94□□□□□ -2.1
CHD9-218ENST00000566029 LINC00476Q8WZB0 136 aa1.94□□□□□ -2.1
CHD9-218ENST00000566029 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
CHD9-218ENST00000566029 CENPEQ02224 2701 aa1.94□□□□□ -2.1
CHD9-218ENST00000566029 IGLV5-52A0A0A0MRZ9 124 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 LINC00959A0A1B0GUT2 108 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 TLX1NBP0CAT3 122 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 LINC01006Q8NI28 216 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 A0A1W2PNM2 257 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 Q8N9P0 234 aaPredicted RBP1.93□□□□□ -2.1
CHD9-218ENST00000566029 JMJD1CQ15652 2540 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 C6orf48Q9UBA6 75 aa1.93□□□□□ -2.1
CHD9-218ENST00000566029 IGKV2-30P06310 120 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 C10orf99Q6UWK7 81 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 PRR34Q9NV39 138 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 DNAH10OSP0CZ25 163 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 APLNQ9ULZ1 77 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 IGKV2D-30A0A075B6S6 120 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 POLQO75417 2590 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 ST20-AS1Q8NBB2 130 aa1.92□□□□□ -2.1
CHD9-218ENST00000566029 EPG5Q9HCE0 2579 aa1.91□□□□□ -2.1
CHD9-218ENST00000566029 LINC01558Q9Y6Z2 57 aa1.91□□□□□ -2.1
CHD9-218ENST00000566029 USP24Q9UPU5 2620 aa1.91□□□□□ -2.1
CHD9-218ENST00000566029 CNBPP62633 177 aaKnown RBP1.91□□□□□ -2.1
CHD9-218ENST00000566029 DEFB4AO15263 64 aa1.91□□□□□ -2.1
CHD9-218ENST00000566029 KRTAP29-1A8MX34 341 aaPredicted RBP1.9□□□□□ -2.1
CHD9-218ENST00000566029 ODF3L2Q3SX64 289 aa1.9□□□□□ -2.1
CHD9-218ENST00000566029 FN1P02751 2386 aaKnown RBP1.9□□□□□ -2.1
CHD9-218ENST00000566029 ADM2Q7Z4H4 148 aa1.9□□□□□ -2.1
CHD9-218ENST00000566029 UTRNP46939 3433 aa1.9□□□□□ -2.1
CHD9-218ENST00000566029 KCNQ1DNQ9H478 68 aa1.9□□□□□ -2.1
CHD9-218ENST00000566029 USP9YO00507 2555 aaPredicted RBP1.9□□□□□ -2.11
CHD9-218ENST00000566029 ROMO1P60602 79 aa1.9□□□□□ -2.11
CHD9-218ENST00000566029 HELZ2Q9BYK8 2649 aaKnown RBP1.9□□□□□ -2.11
CHD9-218ENST00000566029 C18orf65Q6ZTR6 163 aa1.9□□□□□ -2.11
CHD9-218ENST00000566029 SRCAPQ6ZRS2 3230 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 A0A1W2PPR1 153 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 J3QL48 77 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 DSCR10P59022 87 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 IGLV5-48A0A075B6I7 105 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 UNQ6190/PRO20217Q6UXQ8 127 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 GIG44P09565 113 aaPredicted RBP1.89□□□□□ -2.11
CHD9-218ENST00000566029 A0A0D9SG42 100 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 A8MWP4 228 aa1.89□□□□□ -2.11
CHD9-218ENST00000566029 Q8NAQ8 132 aa1.88□□□□□ -2.11
CHD9-218ENST00000566029 ZNF292O60281 2723 aa1.88□□□□□ -2.11
CHD9-218ENST00000566029 SPINK7P58062 85 aa1.88□□□□□ -2.11
CHD9-218ENST00000566029 Q6ZRX8 168 aa1.88□□□□□ -2.11
CHD9-218ENST00000566029 MAST4O15021 2626 aa1.88□□□□□ -2.11
CHD9-218ENST00000566029 SETD2Q9BYW2 2564 aaPredicted RBP1.87□□□□□ -2.11
CHD9-218ENST00000566029 ITPR2Q14571 2701 aa1.87□□□□□ -2.11
CHD9-218ENST00000566029 FLNAP21333 2647 aaKnown RBP1.87□□□□□ -2.11
CHD9-218ENST00000566029 DEFB135Q30KP9 77 aa1.87□□□□□ -2.11
CHD9-218ENST00000566029 NSD1Q96L73 2696 aaPredicted RBP1.87□□□□□ -2.11
CHD9-218ENST00000566029 FASNP49327 2511 aaKnown RBP1.87□□□□□ -2.11
CHD9-218ENST00000566029 NBEAL1Q6ZS30 2694 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 IGF2RP11717 2491 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 NBDYA0A0U1RRE5 68 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 MAPK1IP1LQ8NDC0 245 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 CFAP46Q8IYW2 2715 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 CIRBP-AS1Q8TBR5 109 aa1.86□□□□□ -2.11
CHD9-218ENST00000566029 BPTFQ12830 3046 aa1.85□□□□□ -2.11
CHD9-218ENST00000566029 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
CHD9-218ENST00000566029 C19orf73Q9NVV2 129 aa1.85□□□□□ -2.11
CHD9-218ENST00000566029 Q8N377 158 aa1.85□□□□□ -2.11
CHD9-218ENST00000566029 A0A0G2JQZ4 141 aa1.84□□□□□ -2.11
CHD9-218ENST00000566029 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
CHD9-218ENST00000566029 ACANP16112 2415 aa1.84□□□□□ -2.11
CHD9-218ENST00000566029 KRTAP4-16G5E9R7 235 aaPredicted RBP1.84□□□□□ -2.12
CHD9-218ENST00000566029 CEP350Q5VT06 3117 aa1.84□□□□□ -2.12
CHD9-218ENST00000566029 ITPR3Q14573 2671 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 KRTAP26-1Q6PEX3 210 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 TEP1Q99973 2627 aaKnown RBP1.83□□□□□ -2.12
CHD9-218ENST00000566029 MMP24-AS1A0A0U1RRL7 71 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms