RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 IGLV9-49A0A0B4J1Y8 123 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 CKS1BP61024 79 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 CDKN2A-AS1Q9UH64 79 aa4.45□□□□□ -1.7
SMPD3-206ENST00000566009 M0R378 163 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 LINC00614P0C842 121 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 C3orf79P0CE67 100 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 NKAPP1Q8N9T2 125 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
SMPD3-206ENST00000566009 A0A096LNJ9 63 aa4.43□□□□□ -1.7
SMPD3-206ENST00000566009 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
SMPD3-206ENST00000566009 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
SMPD3-206ENST00000566009 PMVKQ15126 192 aa4.43□□□□□ -1.7
SMPD3-206ENST00000566009 Q8IZM0 81 aa4.43□□□□□ -1.7
SMPD3-206ENST00000566009 CHTOPQ9Y3Y2 248 aaKnown RBP4.43□□□□□ -1.7
SMPD3-206ENST00000566009 KRTDAPP60985 99 aa4.42□□□□□ -1.7
SMPD3-206ENST00000566009 F8VRH5 84 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 DDTP30046 118 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 CXCL5P42830 114 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 COX7B2Q8TF08 81 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 CHCHD1Q96BP2 118 aaKnown RBP4.41□□□□□ -1.7
SMPD3-206ENST00000566009 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
SMPD3-206ENST00000566009 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
SMPD3-206ENST00000566009 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
SMPD3-206ENST00000566009 H3BRM9 83 aa4.4□□□□□ -1.71
SMPD3-206ENST00000566009 HSBP1O75506 76 aa4.4□□□□□ -1.71
SMPD3-206ENST00000566009 ATP5LO75964 103 aa4.39□□□□□ -1.71
SMPD3-206ENST00000566009 HBDP02042 147 aa4.39□□□□□ -1.71
SMPD3-206ENST00000566009 SPINK8P0C7L1 97 aa4.39□□□□□ -1.71
SMPD3-206ENST00000566009 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
SMPD3-206ENST00000566009 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
SMPD3-206ENST00000566009 TRBV20-1A0A075B6N2 111 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
SMPD3-206ENST00000566009 TSTD3H0UI37 97 aa4.37□□□□□ -1.71
SMPD3-206ENST00000566009 SPRR2DP22532 72 aa4.37□□□□□ -1.71
SMPD3-206ENST00000566009 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
SMPD3-206ENST00000566009 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
SMPD3-206ENST00000566009 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
SMPD3-206ENST00000566009 TMEM238LA0A1B0GVL6 79 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
SMPD3-206ENST00000566009 LINC01545Q5VT33 79 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 ATP11AUNQ6ZP68 121 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 SNHG12Q9BXW3 62 aa4.36□□□□□ -1.71
SMPD3-206ENST00000566009 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
SMPD3-206ENST00000566009 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 PFN2P35080 140 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 COX17Q14061 63 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 C6orf99Q4VX62 202 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
SMPD3-206ENST00000566009 C11orf86A6NJI1 115 aa4.34□□□□□ -1.71
SMPD3-206ENST00000566009 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
SMPD3-206ENST00000566009 IFI27L1Q96BM0 104 aa4.34□□□□□ -1.71
SMPD3-206ENST00000566009 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
SMPD3-206ENST00000566009 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 A0A1B0GV90 55 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 H0Y8G0 127 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 ANKRD39Q53RE8 183 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
SMPD3-206ENST00000566009 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 ERG28Q9UKR5 140 aa4.33□□□□□ -1.72
SMPD3-206ENST00000566009 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
SMPD3-206ENST00000566009 C9orf153Q5TBE3 101 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 HRCT1Q6UXD1 115 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 SND1-IT1Q9HBX3 110 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
SMPD3-206ENST00000566009 LINC00158P58513 81 aa4.31□□□□□ -1.72
SMPD3-206ENST00000566009 A6NJY4 79 aa4.3□□□□□ -1.72
SMPD3-206ENST00000566009 M0R143 59 aa4.3□□□□□ -1.72
SMPD3-206ENST00000566009 VPREB1P12018 145 aa4.3□□□□□ -1.72
SMPD3-206ENST00000566009 C2orf91Q6ZV80 131 aa4.3□□□□□ -1.72
SMPD3-206ENST00000566009 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
SMPD3-206ENST00000566009 Q6ZVH6 145 aa4.29□□□□□ -1.72
SMPD3-206ENST00000566009 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
SMPD3-206ENST00000566009 COX8AP10176 69 aa4.28□□□□□ -1.72
SMPD3-206ENST00000566009 HERV-K104P63124 156 aa4.28□□□□□ -1.72
SMPD3-206ENST00000566009 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
SMPD3-206ENST00000566009 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
SMPD3-206ENST00000566009 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
SMPD3-206ENST00000566009 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
SMPD3-206ENST00000566009 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
SMPD3-206ENST00000566009 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms