RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
HERPUD1-210ENST00000565966 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
HERPUD1-210ENST00000565966 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
HERPUD1-210ENST00000565966 COPS9Q8WXC6 57 aa8.22□□□□□ -1.09
HERPUD1-210ENST00000565966 TRAV23DV6A0A075B6W5 121 aa8.21□□□□□ -1.1
HERPUD1-210ENST00000565966 CRYGAP11844 174 aa8.21□□□□□ -1.1
HERPUD1-210ENST00000565966 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.1
HERPUD1-210ENST00000565966 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
HERPUD1-210ENST00000565966 B5MCH6 92 aa8.2□□□□□ -1.1
HERPUD1-210ENST00000565966 COX8AP10176 69 aa8.2□□□□□ -1.1
HERPUD1-210ENST00000565966 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
HERPUD1-210ENST00000565966 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
HERPUD1-210ENST00000565966 A0A087X002 238 aa8.19□□□□□ -1.1
HERPUD1-210ENST00000565966 PAM16Q9Y3D7 125 aa8.19□□□□□ -1.1
HERPUD1-210ENST00000565966 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 SMCR5Q8TEV8 140 aa8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 VAMP8Q9BV40 100 aa8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 CBY1Q9Y3M2 126 aa8.18□□□□□ -1.1
HERPUD1-210ENST00000565966 DLEU1O43261 78 aa8.17□□□□□ -1.1
HERPUD1-210ENST00000565966 PYY3Q5JQD4 70 aa8.17□□□□□ -1.1
HERPUD1-210ENST00000565966 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
HERPUD1-210ENST00000565966 Q6ZRX8 168 aa8.16□□□□□ -1.1
HERPUD1-210ENST00000565966 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
HERPUD1-210ENST00000565966 SPRR4Q96PI1 79 aa8.15□□□□□ -1.1
HERPUD1-210ENST00000565966 Q9BRP9 147 aa8.15□□□□□ -1.1
HERPUD1-210ENST00000565966 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
HERPUD1-210ENST00000565966 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
HERPUD1-210ENST00000565966 A6NDN8 102 aa8.13□□□□□ -1.11
HERPUD1-210ENST00000565966 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-210ENST00000565966 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-210ENST00000565966 A4D1N5 150 aa8.12□□□□□ -1.11
HERPUD1-210ENST00000565966 SLC25A34Q6PIV7 304 aa8.12□□□□□ -1.11
HERPUD1-210ENST00000565966 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
HERPUD1-210ENST00000565966 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
HERPUD1-210ENST00000565966 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
HERPUD1-210ENST00000565966 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
HERPUD1-210ENST00000565966 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
HERPUD1-210ENST00000565966 COX7BP24311 80 aa8.09□□□□□ -1.11
HERPUD1-210ENST00000565966 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-210ENST00000565966 TSPAN13O95857 204 aa8.08□□□□□ -1.12
HERPUD1-210ENST00000565966 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
HERPUD1-210ENST00000565966 C3orf22Q8N5N4 141 aa8.08□□□□□ -1.12
HERPUD1-210ENST00000565966 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
HERPUD1-210ENST00000565966 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
HERPUD1-210ENST00000565966 SMIM11BQ8TCY0 68 aa8.07□□□□□ -1.12
HERPUD1-210ENST00000565966 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
HERPUD1-210ENST00000565966 LRP2P98164 4655 aa8.06□□□□□ -1.12
HERPUD1-210ENST00000565966 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
HERPUD1-210ENST00000565966 ST20-AS1Q8NBB2 130 aa8.06□□□□□ -1.12
HERPUD1-210ENST00000565966 C12orf57Q99622 126 aa8.06□□□□□ -1.12
HERPUD1-210ENST00000565966 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
HERPUD1-210ENST00000565966 CTAG1AP78358 180 aa8.04□□□□□ -1.12
HERPUD1-210ENST00000565966 TAL2Q16559 108 aa8.04□□□□□ -1.12
HERPUD1-210ENST00000565966 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
HERPUD1-210ENST00000565966 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
HERPUD1-210ENST00000565966 CFC1P0CG37 223 aa8.02□□□□□ -1.13
HERPUD1-210ENST00000565966 PRR4Q16378 134 aa8.02□□□□□ -1.13
HERPUD1-210ENST00000565966 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
HERPUD1-210ENST00000565966 CEND1Q8N111 149 aa8.01□□□□□ -1.13
HERPUD1-210ENST00000565966 LPAP08519 4548 aa8□□□□□ -1.13
HERPUD1-210ENST00000565966 SPRR1BP22528 89 aa8□□□□□ -1.13
HERPUD1-210ENST00000565966 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 UQCR10Q9UDW1 63 aa7.99□□□□□ -1.13
HERPUD1-210ENST00000565966 FXYD2P54710 66 aa7.98□□□□□ -1.13
HERPUD1-210ENST00000565966 MOBPQ13875 183 aa7.98□□□□□ -1.13
HERPUD1-210ENST00000565966 VAMP3Q15836 100 aa7.98□□□□□ -1.13
HERPUD1-210ENST00000565966 Q8NBF4 154 aa7.98□□□□□ -1.13
HERPUD1-210ENST00000565966 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
HERPUD1-210ENST00000565966 HSD52Q0P140 79 aa7.97□□□□□ -1.13
HERPUD1-210ENST00000565966 SSBP3-AS1Q7Z2R9 100 aa7.97□□□□□ -1.13
HERPUD1-210ENST00000565966 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 A6NJY4 79 aa7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 H7C2G1 150 aa7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-210ENST00000565966 IGLV5-48A0A075B6I7 105 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 SLC25A20O43772 301 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
HERPUD1-210ENST00000565966 SPINK1P00995 79 aa7.93□□□□□ -1.14
HERPUD1-210ENST00000565966 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
HERPUD1-210ENST00000565966 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
HERPUD1-210ENST00000565966 PRO1854Q9UHT4 67 aa7.93□□□□□ -1.14
HERPUD1-210ENST00000565966 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
HERPUD1-210ENST00000565966 PRO1933Q9H354 126 aa7.92□□□□□ -1.14
HERPUD1-210ENST00000565966 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
HERPUD1-210ENST00000565966 Q1RN00 199 aa7.91□□□□□ -1.14
HERPUD1-210ENST00000565966 SMIM29Q86T20 159 aa7.91□□□□□ -1.14
HERPUD1-210ENST00000565966 Q8N377 158 aa7.91□□□□□ -1.14
HERPUD1-210ENST00000565966 Q6ZQY7 126 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms