RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
GTF3C1-204ENST00000564664 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
GTF3C1-204ENST00000564664 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
GTF3C1-204ENST00000564664 MIR7-3HGQ8N6C7 128 aa7.02□□□□□ -1.29
GTF3C1-204ENST00000564664 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
GTF3C1-204ENST00000564664 LOC107984156A0A0G2JMH3 177 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 COX8AP10176 69 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 SLC25A34Q6PIV7 304 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 ARL17AQ8IVW1 177 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 RETNLBQ9BQ08 111 aa7.01□□□□□ -1.29
GTF3C1-204ENST00000564664 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
GTF3C1-204ENST00000564664 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
GTF3C1-204ENST00000564664 PLNP26678 52 aa7□□□□□ -1.29
GTF3C1-204ENST00000564664 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
GTF3C1-204ENST00000564664 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
GTF3C1-204ENST00000564664 LEPROTO15243 131 aa6.99□□□□□ -1.29
GTF3C1-204ENST00000564664 SMCR5Q8TEV8 140 aa6.99□□□□□ -1.29
GTF3C1-204ENST00000564664 A0A1B0GV90 55 aa6.98□□□□□ -1.29
GTF3C1-204ENST00000564664 NCR3O14931 201 aa6.98□□□□□ -1.29
GTF3C1-204ENST00000564664 SPINK1P00995 79 aa6.98□□□□□ -1.29
GTF3C1-204ENST00000564664 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
GTF3C1-204ENST00000564664 TRBV10-3A0A0K0K1G6 114 aa6.97□□□□□ -1.29
GTF3C1-204ENST00000564664 NMUP48645 174 aa6.97□□□□□ -1.29
GTF3C1-204ENST00000564664 HERVK_113P61574 105 aa6.97□□□□□ -1.29
GTF3C1-204ENST00000564664 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
GTF3C1-204ENST00000564664 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
GTF3C1-204ENST00000564664 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
GTF3C1-204ENST00000564664 B5MCH6 92 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 H0Y8G0 127 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 J3QQQ9 107 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 DPM2O94777 84 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 SSBP3-AS1Q7Z2R9 100 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 Q8NBF4 154 aa6.95□□□□□ -1.3
GTF3C1-204ENST00000564664 NDUFC2O95298 119 aa6.94□□□□□ -1.3
GTF3C1-204ENST00000564664 SPANXB1Q9NS25 103 aaPredicted RBP6.94□□□□□ -1.3
GTF3C1-204ENST00000564664 IGKCP01834 107 aa6.93□□□□□ -1.3
GTF3C1-204ENST00000564664 LGALS3P17931 250 aaKnown RBP6.93□□□□□ -1.3
GTF3C1-204ENST00000564664 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
GTF3C1-204ENST00000564664 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
GTF3C1-204ENST00000564664 CBY1Q9Y3M2 126 aa6.93□□□□□ -1.3
GTF3C1-204ENST00000564664 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
GTF3C1-204ENST00000564664 BVES-AS1Q5T3Y7 98 aa6.92□□□□□ -1.3
GTF3C1-204ENST00000564664 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
GTF3C1-204ENST00000564664 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 TAL2Q16559 108 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 Q6ZRX8 168 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 DAND5Q8N907 189 aa6.91□□□□□ -1.3
GTF3C1-204ENST00000564664 HSD52Q0P140 79 aa6.9□□□□□ -1.3
GTF3C1-204ENST00000564664 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
GTF3C1-204ENST00000564664 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
GTF3C1-204ENST00000564664 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-204ENST00000564664 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
GTF3C1-204ENST00000564664 Q9BRP9 147 aa6.89□□□□□ -1.31
GTF3C1-204ENST00000564664 E9PLD3 99 aa6.88□□□□□ -1.31
GTF3C1-204ENST00000564664 SLC25A20O43772 301 aa6.88□□□□□ -1.31
GTF3C1-204ENST00000564664 TRAV23DV6A0A075B6W5 121 aa6.87□□□□□ -1.31
GTF3C1-204ENST00000564664 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
GTF3C1-204ENST00000564664 A6NDN8 102 aa6.87□□□□□ -1.31
GTF3C1-204ENST00000564664 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
GTF3C1-204ENST00000564664 MOBPQ13875 183 aa6.87□□□□□ -1.31
GTF3C1-204ENST00000564664 IGLV9-49A0A0B4J1Y8 123 aa6.86□□□□□ -1.31
GTF3C1-204ENST00000564664 BATFQ16520 125 aa6.86□□□□□ -1.31
GTF3C1-204ENST00000564664 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
GTF3C1-204ENST00000564664 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
GTF3C1-204ENST00000564664 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-204ENST00000564664 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
GTF3C1-204ENST00000564664 ADAMTSL4-AS1Q5T5F5 129 aa6.85□□□□□ -1.31
GTF3C1-204ENST00000564664 Q8N377 158 aa6.85□□□□□ -1.31
GTF3C1-204ENST00000564664 TIMM17BO60830 172 aa6.84□□□□□ -1.31
GTF3C1-204ENST00000564664 SOSTDC1Q6X4U4 206 aa6.84□□□□□ -1.31
GTF3C1-204ENST00000564664 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
GTF3C1-204ENST00000564664 SPANXCQ9NY87 97 aa6.83□□□□□ -1.32
GTF3C1-204ENST00000564664 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
GTF3C1-204ENST00000564664 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
GTF3C1-204ENST00000564664 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
GTF3C1-204ENST00000564664 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
GTF3C1-204ENST00000564664 C9orf153Q5TBE3 101 aa6.81□□□□□ -1.32
GTF3C1-204ENST00000564664 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
GTF3C1-204ENST00000564664 A0A1B0GWB2 263 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 SPRR1BP22528 89 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 NPC2P61916 151 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 CEND1Q8N111 149 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 LITAFQ99732 161 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
GTF3C1-204ENST00000564664 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
GTF3C1-204ENST00000564664 XP32Q5T750 250 aa6.78□□□□□ -1.32
GTF3C1-204ENST00000564664 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
GTF3C1-204ENST00000564664 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
GTF3C1-204ENST00000564664 LAMTOR3Q9UHA4 124 aa6.78□□□□□ -1.32
GTF3C1-204ENST00000564664 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
GTF3C1-204ENST00000564664 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
GTF3C1-204ENST00000564664 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
GTF3C1-204ENST00000564664 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
GTF3C1-204ENST00000564664 A6NJY4 79 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms