RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 Q6ZRX8 168 aa5.03□□□□□ -1.6
ATXN3-249ENST00000564606 FAM19A5Q7Z5A7 132 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-249ENST00000564606 Q8NDZ9 215 aa5.03□□□□□ -1.6
ATXN3-249ENST00000564606 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
ATXN3-249ENST00000564606 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
ATXN3-249ENST00000564606 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
ATXN3-249ENST00000564606 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
ATXN3-249ENST00000564606 SPRR1AP35321 89 aa5□□□□□ -1.61
ATXN3-249ENST00000564606 C1orf137Q5JT78 98 aa5□□□□□ -1.61
ATXN3-249ENST00000564606 MRPL55Q7Z7F7 128 aaKnown RBP5□□□□□ -1.61
ATXN3-249ENST00000564606 Q8NBF4 154 aa5□□□□□ -1.61
ATXN3-249ENST00000564606 MTORP42345 2549 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 PDZD2O15018 2839 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 NDUFB1O75438 58 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 UBE2BP63146 152 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 TMEM254Q8TBM7 123 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 LINC00474Q9P2X8 69 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 UNC79Q9P2D8 2635 aa4.99□□□□□ -1.61
ATXN3-249ENST00000564606 SETD2Q9BYW2 2564 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-249ENST00000564606 H7BZZ5 65 aa4.98□□□□□ -1.61
ATXN3-249ENST00000564606 DEFB105AQ8NG35 78 aa4.98□□□□□ -1.61
ATXN3-249ENST00000564606 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
ATXN3-249ENST00000564606 NF1P21359 2839 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 ZFHX3Q15911 3703 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 PSCAO43653 123 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 Q8N377 158 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 RETNQ9HD89 108 aa4.97□□□□□ -1.61
ATXN3-249ENST00000564606 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
ATXN3-249ENST00000564606 TM2D3Q9BRN9 247 aa4.96□□□□□ -1.62
ATXN3-249ENST00000564606 LINC00588Q9Y4M8 146 aa4.96□□□□□ -1.62
ATXN3-249ENST00000564606 ACANP16112 2415 aa4.96□□□□□ -1.62
ATXN3-249ENST00000564606 NOTCH2Q04721 2471 aa4.96□□□□□ -1.62
ATXN3-249ENST00000564606 KMT2BQ9UMN6 2715 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-249ENST00000564606 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
ATXN3-249ENST00000564606 H0Y9J4 135 aa4.95□□□□□ -1.62
ATXN3-249ENST00000564606 H3BPC8 53 aa4.95□□□□□ -1.62
ATXN3-249ENST00000564606 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
ATXN3-249ENST00000564606 FN1P02751 2386 aaKnown RBP4.95□□□□□ -1.62
ATXN3-249ENST00000564606 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
ATXN3-249ENST00000564606 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
ATXN3-249ENST00000564606 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-249ENST00000564606 MP68P56378 58 aa4.94□□□□□ -1.62
ATXN3-249ENST00000564606 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
ATXN3-249ENST00000564606 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
ATXN3-249ENST00000564606 IGLV8-61A0A075B6I0 122 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 C3orf84H3BNL1 204 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 M0R2N4 97 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 UBE2DNLQ8IWF7 75 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 OCR1Q9BZK8 76 aa4.93□□□□□ -1.62
ATXN3-249ENST00000564606 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
ATXN3-249ENST00000564606 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
ATXN3-249ENST00000564606 SNURFQ9Y675 71 aa4.92□□□□□ -1.62
ATXN3-249ENST00000564606 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
ATXN3-249ENST00000564606 UBE2AP49459 152 aa4.91□□□□□ -1.62
ATXN3-249ENST00000564606 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
ATXN3-249ENST00000564606 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
ATXN3-249ENST00000564606 V9GYY9 64 aa4.91□□□□□ -1.62
ATXN3-249ENST00000564606 TENM4Q6N022 2769 aa4.9□□□□□ -1.62
ATXN3-249ENST00000564606 A0A1W2PNM2 257 aa4.9□□□□□ -1.63
ATXN3-249ENST00000564606 Q9BRP9 147 aa4.9□□□□□ -1.63
ATXN3-249ENST00000564606 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
ATXN3-249ENST00000564606 ITPR2Q14571 2701 aa4.9□□□□□ -1.63
ATXN3-249ENST00000564606 FASNP49327 2511 aaKnown RBP4.9□□□□□ -1.63
ATXN3-249ENST00000564606 LCE6AA0A183 80 aa4.89□□□□□ -1.63
ATXN3-249ENST00000564606 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
ATXN3-249ENST00000564606 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
ATXN3-249ENST00000564606 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-249ENST00000564606 HELZ2Q9BYK8 2649 aaKnown RBP4.88□□□□□ -1.63
ATXN3-249ENST00000564606 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-249ENST00000564606 SPRR1BP22528 89 aa4.88□□□□□ -1.63
ATXN3-249ENST00000564606 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
ATXN3-249ENST00000564606 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 CSMD2Q7Z408 3487 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-249ENST00000564606 NUPR2A6NF83 97 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 WWC2-AS2Q96NR7 200 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
ATXN3-249ENST00000564606 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
ATXN3-249ENST00000564606 Q5XG85 94 aa4.86□□□□□ -1.63
ATXN3-249ENST00000564606 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
ATXN3-249ENST00000564606 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
ATXN3-249ENST00000564606 Q8N9L7 120 aa4.85□□□□□ -1.63
ATXN3-249ENST00000564606 HIGD2AQ9BW72 106 aa4.85□□□□□ -1.63
ATXN3-249ENST00000564606 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
ATXN3-249ENST00000564606 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
ATXN3-249ENST00000564606 FAM168BA1KXE4 195 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 DSCR10P59022 87 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 ST20-AS1Q8NBB2 130 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
ATXN3-249ENST00000564606 ATRQ13535 2644 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 A0A087WSZ3 146 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 A0A096LNI7 61 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 IGKV2-24A0A0C4DH68 120 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 A8MWP4 228 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms