RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
USB1-209ENST00000564387 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
USB1-209ENST00000564387 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
USB1-209ENST00000564387 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
USB1-209ENST00000564387 CRYGAP11844 174 aa10.23□□□□□ -0.77
USB1-209ENST00000564387 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
USB1-209ENST00000564387 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
USB1-209ENST00000564387 SMCR5Q8TEV8 140 aa10.22□□□□□ -0.77
USB1-209ENST00000564387 CBY1Q9Y3M2 126 aa10.22□□□□□ -0.77
USB1-209ENST00000564387 Q6ZRX8 168 aa10.21□□□□□ -0.77
USB1-209ENST00000564387 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.77
USB1-209ENST00000564387 ZNF73O43830 326 aaPredicted RBP10.2□□□□□ -0.78
USB1-209ENST00000564387 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
USB1-209ENST00000564387 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
USB1-209ENST00000564387 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
USB1-209ENST00000564387 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
USB1-209ENST00000564387 Q9BRP9 147 aa10.19□□□□□ -0.78
USB1-209ENST00000564387 DLEU1O43261 78 aa10.18□□□□□ -0.78
USB1-209ENST00000564387 COX8AP10176 69 aa10.18□□□□□ -0.78
USB1-209ENST00000564387 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
USB1-209ENST00000564387 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
USB1-209ENST00000564387 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
USB1-209ENST00000564387 LINC00483Q53H64 154 aa10.15□□□□□ -0.78
USB1-209ENST00000564387 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
USB1-209ENST00000564387 HINT1P49773 126 aaPredicted RBP10.12□□□□□ -0.79
USB1-209ENST00000564387 TRBV7-6A0A0J9YX20 115 aa10.11□□□□□ -0.79
USB1-209ENST00000564387 ELOF1P60002 83 aaKnown RBP10.1□□□□□ -0.79
USB1-209ENST00000564387 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
USB1-209ENST00000564387 VAMP8Q9BV40 100 aa10.1□□□□□ -0.79
USB1-209ENST00000564387 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
USB1-209ENST00000564387 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 CTAG1AP78358 180 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 C14orf144Q96I85 54 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
USB1-209ENST00000564387 A4D1N5 150 aa10.08□□□□□ -0.8
USB1-209ENST00000564387 A6NDN8 102 aa10.08□□□□□ -0.8
USB1-209ENST00000564387 C3orf22Q8N5N4 141 aa10.08□□□□□ -0.8
USB1-209ENST00000564387 TMA7Q9Y2S6 64 aaKnown RBP10.08□□□□□ -0.8
USB1-209ENST00000564387 DHRS4-AS1Q9P1J3 65 aa10.07□□□□□ -0.8
USB1-209ENST00000564387 COX7BP24311 80 aa10.05□□□□□ -0.8
USB1-209ENST00000564387 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
USB1-209ENST00000564387 SLC25A34Q6PIV7 304 aa10.05□□□□□ -0.8
USB1-209ENST00000564387 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
USB1-209ENST00000564387 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
USB1-209ENST00000564387 LINC00304Q8N9R0 145 aa10.04□□□□□ -0.8
USB1-209ENST00000564387 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
USB1-209ENST00000564387 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
USB1-209ENST00000564387 SPRR1BP22528 89 aa10.03□□□□□ -0.8
USB1-209ENST00000564387 LRP2P98164 4655 aa10.03□□□□□ -0.8
USB1-209ENST00000564387 ST20-AS1Q8NBB2 130 aa10.02□□□□□ -0.81
USB1-209ENST00000564387 TSPAN13O95857 204 aa10□□□□□ -0.81
USB1-209ENST00000564387 SPAG11AQ6PDA7 123 aa10□□□□□ -0.81
USB1-209ENST00000564387 TAL2Q16559 108 aa9.99□□□□□ -0.81
USB1-209ENST00000564387 SSBP3-AS1Q7Z2R9 100 aa9.99□□□□□ -0.81
USB1-209ENST00000564387 CFC1BP0CG36 223 aa9.96□□□□□ -0.82
USB1-209ENST00000564387 CFC1P0CG37 223 aa9.96□□□□□ -0.82
USB1-209ENST00000564387 Q8NBF4 154 aa9.96□□□□□ -0.82
USB1-209ENST00000564387 UBR4Q5T4S7 5183 aa9.95□□□□□ -0.82
USB1-209ENST00000564387 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 IGLV9-49A0A0B4J1Y8 123 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 LINC01547P58512 204 aaPredicted RBP9.94□□□□□ -0.82
USB1-209ENST00000564387 MOBPQ13875 183 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 VAMP3Q15836 100 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 CEND1Q8N111 149 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 C12orf57Q99622 126 aa9.94□□□□□ -0.82
USB1-209ENST00000564387 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
USB1-209ENST00000564387 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
USB1-209ENST00000564387 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
USB1-209ENST00000564387 SPINK1P00995 79 aa9.92□□□□□ -0.82
USB1-209ENST00000564387 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
USB1-209ENST00000564387 LPAP08519 4548 aa9.91□□□□□ -0.82
USB1-209ENST00000564387 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
USB1-209ENST00000564387 PRR4Q16378 134 aa9.9□□□□□ -0.82
USB1-209ENST00000564387 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
USB1-209ENST00000564387 SMIM29Q86T20 159 aa9.9□□□□□ -0.82
USB1-209ENST00000564387 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
USB1-209ENST00000564387 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
USB1-209ENST00000564387 TMEM238LA0A1B0GVL6 79 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 A6NJY4 79 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 SLC25A20O43772 301 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 FXYD2P54710 66 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 RAB37Q96AX2 223 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 UQCR10Q9UDW1 63 aa9.87□□□□□ -0.83
USB1-209ENST00000564387 hADV29S1A0JD25 119 aa9.86□□□□□ -0.83
USB1-209ENST00000564387 HSD52Q0P140 79 aa9.86□□□□□ -0.83
USB1-209ENST00000564387 C9orf153Q5TBE3 101 aa9.86□□□□□ -0.83
USB1-209ENST00000564387 Q8N377 158 aa9.86□□□□□ -0.83
USB1-209ENST00000564387 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
USB1-209ENST00000564387 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
USB1-209ENST00000564387 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
USB1-209ENST00000564387 Q1RN00 199 aa9.83□□□□□ -0.84
USB1-209ENST00000564387 H7C2G1 150 aa9.82□□□□□ -0.84
USB1-209ENST00000564387 Q6ZQY7 126 aa9.82□□□□□ -0.84
USB1-209ENST00000564387 H0YGX0 51 aa9.81□□□□□ -0.84
USB1-209ENST00000564387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
USB1-209ENST00000564387 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
USB1-209ENST00000564387 SMIM6P0DI80 62 aa9.79□□□□□ -0.84
USB1-209ENST00000564387 CD164Q04900 197 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms