RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
CMTM3-207ENST00000564060 CTAG1AP78358 180 aa11.62□□□□□ -0.55
CMTM3-207ENST00000564060 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-207ENST00000564060 Q6ZRX8 168 aa11.62□□□□□ -0.55
CMTM3-207ENST00000564060 COPS9Q8WXC6 57 aa11.62□□□□□ -0.55
CMTM3-207ENST00000564060 TTTY13Q9BZ97 58 aa11.62□□□□□ -0.55
CMTM3-207ENST00000564060 ATOH7Q8N100 152 aa11.61□□□□□ -0.55
CMTM3-207ENST00000564060 HIST3H2BBQ8N257 126 aa11.61□□□□□ -0.55
CMTM3-207ENST00000564060 UBR4Q5T4S7 5183 aa11.61□□□□□ -0.55
CMTM3-207ENST00000564060 HINT1P49773 126 aaPredicted RBP11.6□□□□□ -0.55
CMTM3-207ENST00000564060 PRR4Q16378 134 aa11.6□□□□□ -0.55
CMTM3-207ENST00000564060 ANKRD39Q53RE8 183 aa11.6□□□□□ -0.55
CMTM3-207ENST00000564060 ZNF73O43830 326 aaPredicted RBP11.59□□□□□ -0.55
CMTM3-207ENST00000564060 LINC00518Q8N0U6 118 aa11.59□□□□□ -0.55
CMTM3-207ENST00000564060 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
CMTM3-207ENST00000564060 SPANXDQ9BXN6 97 aa11.59□□□□□ -0.55
CMTM3-207ENST00000564060 OR13C6PQ8NH95 151 aa11.58□□□□□ -0.56
CMTM3-207ENST00000564060 Q6ZVH6 145 aa11.57□□□□□ -0.56
CMTM3-207ENST00000564060 C3orf22Q8N5N4 141 aa11.57□□□□□ -0.56
CMTM3-207ENST00000564060 SPAG11AQ6PDA7 123 aa11.56□□□□□ -0.56
CMTM3-207ENST00000564060 PPDPFQ9H3Y8 114 aa11.56□□□□□ -0.56
CMTM3-207ENST00000564060 HSBP1L1C9JCN9 74 aa11.55□□□□□ -0.56
CMTM3-207ENST00000564060 IFITM1P13164 125 aa11.55□□□□□ -0.56
CMTM3-207ENST00000564060 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
CMTM3-207ENST00000564060 Q9BRP9 147 aa11.55□□□□□ -0.56
CMTM3-207ENST00000564060 GAGE2AQ6NT46 116 aa11.54□□□□□ -0.56
CMTM3-207ENST00000564060 ERC2-IT1O76042 136 aa11.52□□□□□ -0.57
CMTM3-207ENST00000564060 C4orf48Q5BLP8 95 aa11.52□□□□□ -0.57
CMTM3-207ENST00000564060 PCP2Q8IVA1 136 aa11.52□□□□□ -0.57
CMTM3-207ENST00000564060 C5orf52A6NGY3 159 aa11.51□□□□□ -0.57
CMTM3-207ENST00000564060 DHRS4-AS1Q9P1J3 65 aa11.48□□□□□ -0.57
CMTM3-207ENST00000564060 LPAP08519 4548 aa11.48□□□□□ -0.57
CMTM3-207ENST00000564060 Q8NBF4 154 aa11.47□□□□□ -0.57
CMTM3-207ENST00000564060 SSBP3-AS1Q7Z2R9 100 aa11.45□□□□□ -0.58
CMTM3-207ENST00000564060 MUSTN1Q8IVN3 82 aa11.45□□□□□ -0.58
CMTM3-207ENST00000564060 IGLV9-49A0A0B4J1Y8 123 aa11.44□□□□□ -0.58
CMTM3-207ENST00000564060 COX7BP24311 80 aa11.44□□□□□ -0.58
CMTM3-207ENST00000564060 ELOF1P60002 83 aaKnown RBP11.44□□□□□ -0.58
CMTM3-207ENST00000564060 MOBPQ13875 183 aa11.44□□□□□ -0.58
CMTM3-207ENST00000564060 C6orf99Q4VX62 202 aa11.44□□□□□ -0.58
CMTM3-207ENST00000564060 A6NDN8 102 aa11.43□□□□□ -0.58
CMTM3-207ENST00000564060 SCGB1D1O95968 90 aa11.43□□□□□ -0.58
CMTM3-207ENST00000564060 SPINK1P00995 79 aa11.43□□□□□ -0.58
CMTM3-207ENST00000564060 RETNLBQ9BQ08 111 aa11.43□□□□□ -0.58
CMTM3-207ENST00000564060 TRAV13-2A0A0B4J235 113 aa11.42□□□□□ -0.58
CMTM3-207ENST00000564060 TRBV7-6A0A0J9YX20 115 aa11.42□□□□□ -0.58
CMTM3-207ENST00000564060 SLC25A34Q6PIV7 304 aa11.42□□□□□ -0.58
CMTM3-207ENST00000564060 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
CMTM3-207ENST00000564060 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
CMTM3-207ENST00000564060 C9orf153Q5TBE3 101 aa11.39□□□□□ -0.59
CMTM3-207ENST00000564060 SPRR1BP22528 89 aa11.37□□□□□ -0.59
CMTM3-207ENST00000564060 RPS29P62273 56 aaKnown RBP11.37□□□□□ -0.59
CMTM3-207ENST00000564060 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
CMTM3-207ENST00000564060 A4D1N5 150 aa11.36□□□□□ -0.59
CMTM3-207ENST00000564060 FP248Q71RG6 208 aaPredicted RBP11.36□□□□□ -0.59
CMTM3-207ENST00000564060 TPRXLQ17RH7 258 aa11.35□□□□□ -0.59
CMTM3-207ENST00000564060 LAMTOR3Q9UHA4 124 aa11.34□□□□□ -0.59
CMTM3-207ENST00000564060 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
CMTM3-207ENST00000564060 COX8AP10176 69 aa11.32□□□□□ -0.6
CMTM3-207ENST00000564060 TAL2Q16559 108 aa11.32□□□□□ -0.6
CMTM3-207ENST00000564060 SMIM11BQ8TCY0 68 aa11.31□□□□□ -0.6
CMTM3-207ENST00000564060 CDIP1Q9H305 208 aa11.31□□□□□ -0.6
CMTM3-207ENST00000564060 TEX49A0A1B0GTD5 131 aa11.3□□□□□ -0.6
CMTM3-207ENST00000564060 DLEU1O43261 78 aa11.29□□□□□ -0.6
CMTM3-207ENST00000564060 VAMP3Q15836 100 aa11.29□□□□□ -0.6
CMTM3-207ENST00000564060 HIST1H4GQ99525 98 aa11.29□□□□□ -0.6
CMTM3-207ENST00000564060 RNF213Q63HN8 5207 aa11.27□□□□□ -0.61
CMTM3-207ENST00000564060 SLC25A20O43772 301 aa11.27□□□□□ -0.61
CMTM3-207ENST00000564060 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
CMTM3-207ENST00000564060 Q8N377 158 aa11.26□□□□□ -0.61
CMTM3-207ENST00000564060 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
CMTM3-207ENST00000564060 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
CMTM3-207ENST00000564060 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
CMTM3-207ENST00000564060 PAM16Q9Y3D7 125 aa11.24□□□□□ -0.61
CMTM3-207ENST00000564060 Q1RN00 199 aa11.23□□□□□ -0.61
CMTM3-207ENST00000564060 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
CMTM3-207ENST00000564060 C14orf144Q96I85 54 aa11.21□□□□□ -0.61
CMTM3-207ENST00000564060 PRO1933Q9H354 126 aa11.21□□□□□ -0.61
CMTM3-207ENST00000564060 HIGD1BQ9P298 99 aa11.21□□□□□ -0.61
CMTM3-207ENST00000564060 LINC01547P58512 204 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-207ENST00000564060 C12orf57Q99622 126 aa11.19□□□□□ -0.62
CMTM3-207ENST00000564060 CD164Q04900 197 aa11.18□□□□□ -0.62
CMTM3-207ENST00000564060 BVES-AS1Q5T3Y7 98 aa11.18□□□□□ -0.62
CMTM3-207ENST00000564060 LINC00575Q6W349 94 aa11.18□□□□□ -0.62
CMTM3-207ENST00000564060 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
CMTM3-207ENST00000564060 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
CMTM3-207ENST00000564060 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
CMTM3-207ENST00000564060 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
CMTM3-207ENST00000564060 A0A0U1RQV1 116 aa11.14□□□□□ -0.63
CMTM3-207ENST00000564060 H7C2G1 150 aa11.14□□□□□ -0.63
CMTM3-207ENST00000564060 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
CMTM3-207ENST00000564060 F8WEM9 126 aa11.13□□□□□ -0.63
CMTM3-207ENST00000564060 Q6ZQY7 126 aa11.12□□□□□ -0.63
CMTM3-207ENST00000564060 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
CMTM3-207ENST00000564060 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
CMTM3-207ENST00000564060 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
CMTM3-207ENST00000564060 A6NJY4 79 aa11.1□□□□□ -0.63
CMTM3-207ENST00000564060 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
CMTM3-207ENST00000564060 CFC1P0CG37 223 aa11.1□□□□□ -0.63
CMTM3-207ENST00000564060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms