RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SMIM27A0A1W2PRY6 76 aa4.05□□□□□ -1.76
HERPUD1-206ENST00000563343 PPBPP02775 128 aa4.05□□□□□ -1.76
HERPUD1-206ENST00000563343 SPRR1AP35321 89 aa4.05□□□□□ -1.76
HERPUD1-206ENST00000563343 CYSLTR1Q9Y271 337 aa4.05□□□□□ -1.76
HERPUD1-206ENST00000563343 FABP4P15090 132 aa4.04□□□□□ -1.76
HERPUD1-206ENST00000563343 RPL24P83731 157 aaKnown RBP4.04□□□□□ -1.76
HERPUD1-206ENST00000563343 A0A1B0GW15 77 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 MT2AP02795 61 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 PFN2P35080 140 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 RPL37P61927 97 aaKnown RBP4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 GAGE2AQ6NT46 116 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 ORMDL3Q8N138 153 aa4.03□□□□□ -1.76
HERPUD1-206ENST00000563343 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 SPINK8P0C7L1 97 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 TMEM136Q6ZRR5 245 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 Q8N8P6 123 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
HERPUD1-206ENST00000563343 LOC389332A0A1B0GUA5 103 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 TINCRA0A1B0GVN0 87 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 C20orf202A1L168 122 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 ATP5LO75964 103 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 MT1FP04733 61 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 MRPL54Q6P161 138 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 C14orf144Q96I85 54 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 TIMM17AQ99595 171 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
HERPUD1-206ENST00000563343 M0R143 59 aa4□□□□□ -1.77
HERPUD1-206ENST00000563343 COX17Q14061 63 aa4□□□□□ -1.77
HERPUD1-206ENST00000563343 ATP5L2Q7Z4Y8 100 aa4□□□□□ -1.77
HERPUD1-206ENST00000563343 UBE2V1Q13404 147 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 PMCHL1Q16048 86 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 ORMDL2Q53FV1 153 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 PAPPA-AS1Q5QFB9 102 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 KCNQ1DNQ9H478 68 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 MAP1LC3AQ9H492 121 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 LAMTOR2Q9Y2Q5 125 aa3.99□□□□□ -1.77
HERPUD1-206ENST00000563343 IGLV5-39A0A0G2JS06 123 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 K7EMI3 77 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 TOMM6Q96B49 74 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 Q9BRP9 147 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
HERPUD1-206ENST00000563343 LINC00614P0C842 121 aa3.97□□□□□ -1.77
HERPUD1-206ENST00000563343 ZNF625Q96I27 306 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-206ENST00000563343 MIEN1Q9BRT3 115 aa3.97□□□□□ -1.77
HERPUD1-206ENST00000563343 ETDCA0A1B0GVM5 59 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 COL5A1-AS1Q5SY13 56 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 C9orf153Q5TBE3 101 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 Q6Q795 121 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 ERASQ7Z444 233 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 BAGE3Q86Y29 109 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 LIMD2Q9BT23 127 aa3.96□□□□□ -1.78
HERPUD1-206ENST00000563343 TRBV10-3A0A0K0K1G6 114 aa3.95□□□□□ -1.78
HERPUD1-206ENST00000563343 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
HERPUD1-206ENST00000563343 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
HERPUD1-206ENST00000563343 UQCR10Q9UDW1 63 aa3.95□□□□□ -1.78
HERPUD1-206ENST00000563343 SERF1AO75920 110 aa3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 SCGB3A1Q96QR1 104 aa3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 PRO1933Q9H354 126 aa3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 CHTOPQ9Y3Y2 248 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-206ENST00000563343 NEBP20929 6669 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 A0A1B0GV90 55 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 NCR3O14931 201 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 HSBP1O75506 76 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 KIAA1644Q3SXP7 199 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 HRCT1Q6UXD1 115 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 Q6ZRX8 168 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 Q75L30 129 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 SNHG12Q9BXW3 62 aa3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 NXT2Q9NPJ8 142 aaKnown RBP3.93□□□□□ -1.78
HERPUD1-206ENST00000563343 H3BRM9 83 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 DLEU1O43261 78 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 ZNF22P17026 224 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 G0S2P27469 103 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 PMVKQ15126 192 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 C1orf195Q5TG92 126 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 PMCHL2Q9BQD1 86 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
HERPUD1-206ENST00000563343 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 KRTDAPP60985 99 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 SPATA45Q537H7 98 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 Q5XG85 94 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 BOD1L2Q8IYS8 172 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 ST20-AS1Q8NBB2 130 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 C18orf32Q8TCD1 76 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 HSPB8Q9UJY1 196 aa3.91□□□□□ -1.78
HERPUD1-206ENST00000563343 A0A0U1RRA0 63 aa3.9□□□□□ -1.79
HERPUD1-206ENST00000563343 LINC00158P58513 81 aa3.9□□□□□ -1.79
HERPUD1-206ENST00000563343 KRTAP10-10P60014 251 aa3.9□□□□□ -1.79
HERPUD1-206ENST00000563343 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
HERPUD1-206ENST00000563343 LINC01546A6NGU7 62 aa3.89□□□□□ -1.79
HERPUD1-206ENST00000563343 C3orf79P0CE67 100 aa3.89□□□□□ -1.79
HERPUD1-206ENST00000563343 SPRR1BP22528 89 aa3.89□□□□□ -1.79
HERPUD1-206ENST00000563343 CD164Q04900 197 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms