RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRBV10-3A0A0K0K1G6 114 aa9.49□□□□□ -0.89
USB1-208ENST00000563207 ZNF861PO60384 105 aa9.49□□□□□ -0.89
USB1-208ENST00000563207 IGLV6-57P01721 117 aa9.49□□□□□ -0.89
USB1-208ENST00000563207 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
USB1-208ENST00000563207 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
USB1-208ENST00000563207 SPRR1AP35321 89 aa9.46□□□□□ -0.9
USB1-208ENST00000563207 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
USB1-208ENST00000563207 HIST1H4GQ99525 98 aa9.46□□□□□ -0.9
USB1-208ENST00000563207 LPAP08519 4548 aa9.46□□□□□ -0.9
USB1-208ENST00000563207 H0Y9J4 135 aa9.45□□□□□ -0.9
USB1-208ENST00000563207 UBE2AP49459 152 aa9.45□□□□□ -0.9
USB1-208ENST00000563207 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
USB1-208ENST00000563207 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
USB1-208ENST00000563207 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
USB1-208ENST00000563207 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
USB1-208ENST00000563207 TRAV23DV6A0A075B6W5 121 aa9.43□□□□□ -0.9
USB1-208ENST00000563207 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
USB1-208ENST00000563207 PRR26Q8N8Z3 221 aa9.43□□□□□ -0.9
USB1-208ENST00000563207 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
USB1-208ENST00000563207 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
USB1-208ENST00000563207 TAL2Q16559 108 aa9.42□□□□□ -0.9
USB1-208ENST00000563207 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
USB1-208ENST00000563207 UQCR10Q9UDW1 63 aa9.41□□□□□ -0.9
USB1-208ENST00000563207 LOC105371267A0A1B0GV96 52 aa9.4□□□□□ -0.9
USB1-208ENST00000563207 A4D1N5 150 aa9.4□□□□□ -0.9
USB1-208ENST00000563207 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
USB1-208ENST00000563207 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
USB1-208ENST00000563207 A6NDN8 102 aa9.39□□□□□ -0.91
USB1-208ENST00000563207 PRLHP81277 87 aa9.39□□□□□ -0.91
USB1-208ENST00000563207 B5MCH6 92 aa9.37□□□□□ -0.91
USB1-208ENST00000563207 KRTAP1-4P0C5Y4 121 aa9.36□□□□□ -0.91
USB1-208ENST00000563207 Q6ZRX8 168 aa9.36□□□□□ -0.91
USB1-208ENST00000563207 CEND1Q8N111 149 aa9.36□□□□□ -0.91
USB1-208ENST00000563207 TRBV7-6A0A0J9YX20 115 aa9.35□□□□□ -0.91
USB1-208ENST00000563207 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
USB1-208ENST00000563207 A6NJY4 79 aa9.35□□□□□ -0.91
USB1-208ENST00000563207 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
USB1-208ENST00000563207 HSD52Q0P140 79 aa9.33□□□□□ -0.92
USB1-208ENST00000563207 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
USB1-208ENST00000563207 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
USB1-208ENST00000563207 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
USB1-208ENST00000563207 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
USB1-208ENST00000563207 CFC1P0CG37 223 aa9.31□□□□□ -0.92
USB1-208ENST00000563207 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
USB1-208ENST00000563207 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 COX7BP24311 80 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
USB1-208ENST00000563207 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 Q9BRP9 147 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 DHRS4-AS1Q9P1J3 65 aa9.3□□□□□ -0.92
USB1-208ENST00000563207 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
USB1-208ENST00000563207 VAMP3Q15836 100 aa9.29□□□□□ -0.92
USB1-208ENST00000563207 FAM229BQ4G0N7 80 aa9.29□□□□□ -0.92
USB1-208ENST00000563207 C12orf57Q99622 126 aa9.29□□□□□ -0.92
USB1-208ENST00000563207 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
USB1-208ENST00000563207 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
USB1-208ENST00000563207 FXYD2P54710 66 aa9.27□□□□□ -0.93
USB1-208ENST00000563207 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
USB1-208ENST00000563207 CRYGAP11844 174 aa9.26□□□□□ -0.93
USB1-208ENST00000563207 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
USB1-208ENST00000563207 BVES-AS1Q5T3Y7 98 aa9.25□□□□□ -0.93
USB1-208ENST00000563207 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
USB1-208ENST00000563207 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
USB1-208ENST00000563207 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
USB1-208ENST00000563207 A0A087X002 238 aa9.21□□□□□ -0.94
USB1-208ENST00000563207 M0R143 59 aa9.21□□□□□ -0.94
USB1-208ENST00000563207 SLC25A20O43772 301 aa9.21□□□□□ -0.94
USB1-208ENST00000563207 H7C2G1 150 aa9.2□□□□□ -0.94
USB1-208ENST00000563207 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
USB1-208ENST00000563207 TSPAN13O95857 204 aa9.19□□□□□ -0.94
USB1-208ENST00000563207 CTAG1AP78358 180 aa9.19□□□□□ -0.94
USB1-208ENST00000563207 PRR4Q16378 134 aa9.19□□□□□ -0.94
USB1-208ENST00000563207 Q1RN00 199 aa9.19□□□□□ -0.94
USB1-208ENST00000563207 GAGE2AQ6NT46 116 aa9.19□□□□□ -0.94
USB1-208ENST00000563207 H0YGX0 51 aa9.18□□□□□ -0.94
USB1-208ENST00000563207 LINC00575Q6W349 94 aa9.18□□□□□ -0.94
USB1-208ENST00000563207 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
USB1-208ENST00000563207 SNCGO76070 127 aa9.17□□□□□ -0.94
USB1-208ENST00000563207 SPRR1BP22528 89 aa9.17□□□□□ -0.94
USB1-208ENST00000563207 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
USB1-208ENST00000563207 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
USB1-208ENST00000563207 hADV29S1A0JD25 119 aa9.15□□□□□ -0.94
USB1-208ENST00000563207 MUC2Q02817 5179 aa9.15□□□□□ -0.95
USB1-208ENST00000563207 TEX49A0A1B0GTD5 131 aa9.14□□□□□ -0.95
USB1-208ENST00000563207 IGLV5-48A0A075B6I7 105 aa9.13□□□□□ -0.95
USB1-208ENST00000563207 K7ERJ3 54 aa9.13□□□□□ -0.95
USB1-208ENST00000563207 A0A1B0GX51 115 aa9.12□□□□□ -0.95
USB1-208ENST00000563207 COX6CP09669 75 aa9.12□□□□□ -0.95
USB1-208ENST00000563207 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
USB1-208ENST00000563207 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
USB1-208ENST00000563207 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
USB1-208ENST00000563207 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
USB1-208ENST00000563207 TRIAP1O43715 76 aa9.1□□□□□ -0.95
USB1-208ENST00000563207 PSMB2P49721 201 aa9.1□□□□□ -0.95
USB1-208ENST00000563207 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
USB1-208ENST00000563207 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
USB1-208ENST00000563207 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
USB1-208ENST00000563207 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
USB1-208ENST00000563207 Q6ZQY7 126 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms