RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SPHKAPQ2M3C7 1700 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 NKTRP30414 1462 aaKnown RBP-0.61□□□□□ -2.51
CHD9-207ENST00000562806 COX8AP10176 69 aa-0.62□□□□□ -2.51
CHD9-207ENST00000562806 ATP5EP56381 51 aaPredicted RBP-0.62□□□□□ -2.51
CHD9-207ENST00000562806 C1orf54Q8WWF1 131 aa-0.62□□□□□ -2.51
CHD9-207ENST00000562806 USMG5Q96IX5 58 aa-0.62□□□□□ -2.51
CHD9-207ENST00000562806 CDC42BPGQ6DT37 1551 aa-0.62□□□□□ -2.51
CHD9-207ENST00000562806 NRKQ7Z2Y5 1582 aa-0.62□□□□□ -2.51
CHD9-207ENST00000562806 SLIT1O75093 1534 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 ARHGAP5Q13017 1502 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 MAP3K1Q13233 1512 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 USP34Q70CQ2 3546 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 A0A1B0GV90 55 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 A0A1B0GWA3 101 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 CPSF4LA6NMK7 179 aaKnown RBP-0.63□□□□□ -2.51
CHD9-207ENST00000562806 F6UZH7 168 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 SNAPC5O75971 98 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 H1FX-AS1Q4G0G2 97 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 PRO1933Q9H354 126 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 PRO1854Q9UHT4 67 aa-0.63□□□□□ -2.51
CHD9-207ENST00000562806 TARBP1Q13395 1621 aaKnown RBP-0.64□□□□□ -2.51
CHD9-207ENST00000562806 PZPP20742 1482 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 A0A087WVE0 104 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 FAM24AA6NFZ4 105 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 COX6CP09669 75 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 TRAPPC2P0DI81 140 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 TRAPPC2BP0DI82 140 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 SEC11AP67812 179 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 UNC80Q8N2C7 3258 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 KNDC1Q76NI1 1749 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 KIAA1551Q9HCM1 1747 aa-0.64□□□□□ -2.51
CHD9-207ENST00000562806 DNAH12Q6ZR08 3092 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 H0YGG7 62 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 DEFB4AO15263 64 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 DLEU1O43261 78 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 RPL13AP3Q6NVV1 102 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 LINC00846Q9NV44 126 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 IER3IP1Q9Y5U9 82 aa-0.65□□□□□ -2.51
CHD9-207ENST00000562806 EDC4Q6P2E9 1401 aaKnown RBP-0.65□□□□□ -2.51
CHD9-207ENST00000562806 FYCO1Q9BQS8 1478 aa-0.66□□□□□ -2.51
CHD9-207ENST00000562806 ABCA3Q99758 1704 aa-0.66□□□□□ -2.51
CHD9-207ENST00000562806 CICQ96RK0 1608 aaPredicted RBP-0.66□□□□□ -2.51
CHD9-207ENST00000562806 A0A1B0GU69 56 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 NAP1L6A6NFF2 107 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 CRYM-AS1A6NIL9 109 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 SAA2P0DJI9 122 aaPredicted RBP-0.66□□□□□ -2.52
CHD9-207ENST00000562806 HSD52Q0P140 79 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 DEFB110Q30KQ9 67 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 LELP1Q5T871 98 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 CLPSL2Q6UWE3 100 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 C12orf57Q99622 126 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 CENPFP49454 3210 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 ANKRD50Q9ULJ7 1429 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 SHPRHQ149N8 1683 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 EIF4G3O43432 1585 aaKnown RBP-0.66□□□□□ -2.52
CHD9-207ENST00000562806 ASPMQ8IZT6 3477 aa-0.66□□□□□ -2.52
CHD9-207ENST00000562806 PDCD11Q14690 1871 aaKnown RBP-0.67□□□□□ -2.52
CHD9-207ENST00000562806 MAPKBP1O60336 1514 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 CUX1P39880 1505 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 PPP3R1P63098 170 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 C6orf201Q7Z4U5 140 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 SVBPQ8N300 66 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 ABCC5O15440 1437 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 LRRC37AA6NMS7 1700 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 CDC42BPAQ5VT25 1732 aa-0.67□□□□□ -2.52
CHD9-207ENST00000562806 hADV29S1A0JD25 119 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 CORTO00230 105 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 SNCAP37840 140 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 GNG4P50150 75 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 RPS29P62273 56 aaKnown RBP-0.68□□□□□ -2.52
CHD9-207ENST00000562806 PRLHP81277 87 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 CCDC141Q6ZP82 1450 aa-0.68□□□□□ -2.52
CHD9-207ENST00000562806 MON2Q7Z3U7 1717 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 CDH23Q9H251 3354 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 NCOA3Q9Y6Q9 1424 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 C7orf77A4D0Y5 90 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 KRTAP19-2Q3LHN2 52 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 DEFB107AQ8IZN7 70 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 WFDC9Q8NEX5 89 aa-0.69□□□□□ -2.52
CHD9-207ENST00000562806 BRCA2P51587 3418 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 MMP24-AS1A0A0U1RRL7 71 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 H0Y9P7 68 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 H3BQ15 152 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 I3L3M4 83 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 TNP1P09430 55 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 S100A1P23297 94 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 WFDC13Q8IUB5 93 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 C5P01031 1676 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 ANKRD36A6QL64 1941 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 BCORQ6W2J9 1755 aa-0.7□□□□□ -2.52
CHD9-207ENST00000562806 VPS13AQ96RL7 3174 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 MAGI2Q86UL8 1455 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 A0A0G2JND7 137 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 EFCAB10A6NFE3 127 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 LINC00587B1AMM8 73 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 TMEM262E9PQX1 116 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 H7BZZ5 65 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 CGREF1Q99674 301 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 MRPL34Q9BQ48 92 aaKnown RBP-0.71□□□□□ -2.52
CHD9-207ENST00000562806 HIGD1BQ9P298 99 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms