RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 IGLV1-50A0A075B6I6 118 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 H0Y9J4 135 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 NCR3O14931 201 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 BCE1O60756 84 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 NPC2P61916 151 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 HERV-K104P63124 156 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 RPL24P83731 157 aaKnown RBP3.49□□□□□ -1.85
CDH13-206ENST00000562601 COA6Q5JTJ3 125 aaKnown RBP3.49□□□□□ -1.85
CDH13-206ENST00000562601 LINC01545Q5VT33 79 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 BOD1L2Q8IYS8 172 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 DIRC1Q969H9 104 aa3.49□□□□□ -1.85
CDH13-206ENST00000562601 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
CDH13-206ENST00000562601 E9PLD3 99 aa3.48□□□□□ -1.85
CDH13-206ENST00000562601 ZNF861PO60384 105 aa3.48□□□□□ -1.85
CDH13-206ENST00000562601 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
CDH13-206ENST00000562601 TTTY13Q9BZ97 58 aa3.48□□□□□ -1.85
CDH13-206ENST00000562601 A0A0J9YXY3 114 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 LINC00587B1AMM8 73 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 M0R378 163 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 NMUP48645 174 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 UBE2AP49459 152 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 PRLHP81277 87 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 ADAMTSL4-AS1Q5T5F5 129 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 FAM19A1Q7Z5A9 133 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 HIST3H2BBQ8N257 126 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 TMEM126AQ9H061 195 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
CDH13-206ENST00000562601 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
CDH13-206ENST00000562601 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
CDH13-206ENST00000562601 TRBV10-3A0A0K0K1G6 114 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 C20orf202A1L168 122 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 S100A6P06703 90 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 S100A2P29034 98 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
CDH13-206ENST00000562601 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 HIST1H2BLQ99880 126 aa3.45□□□□□ -1.86
CDH13-206ENST00000562601 A0A087X002 238 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 DDTP30046 118 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 LITAFQ99732 161 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 MIEN1Q9BRT3 115 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
CDH13-206ENST00000562601 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
CDH13-206ENST00000562601 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
CDH13-206ENST00000562601 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
CDH13-206ENST00000562601 LINC00308Q8TCZ7 52 aa3.43□□□□□ -1.86
CDH13-206ENST00000562601 KCNQ1DNQ9H478 68 aa3.43□□□□□ -1.86
CDH13-206ENST00000562601 LPAP08519 4548 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 TRBV10-2A0A0K0K1G8 114 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 OR13C6PQ8NH95 151 aa3.42□□□□□ -1.86
CDH13-206ENST00000562601 SPANXB1Q9NS25 103 aaPredicted RBP3.42□□□□□ -1.86
CDH13-206ENST00000562601 LRP2P98164 4655 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 KRTAP4-16G5E9R7 235 aaPredicted RBP3.41□□□□□ -1.86
CDH13-206ENST00000562601 TIMM17BO60830 172 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 NDUFC2O95298 119 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 TSPAN13O95857 204 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 IGLV6-57P01721 117 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 CRYGAP11844 174 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 SPRR1AP35321 89 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
CDH13-206ENST00000562601 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
CDH13-206ENST00000562601 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 SMCR5Q8TEV8 140 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
CDH13-206ENST00000562601 RNF213Q63HN8 5207 aa3.4□□□□□ -1.86
CDH13-206ENST00000562601 TRAV23DV6A0A075B6W5 121 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 S100A12P80511 92 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 C3orf22Q8N5N4 141 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 LINC00337Q8N6G1 96 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 SPANXCQ9NY87 97 aa3.4□□□□□ -1.87
CDH13-206ENST00000562601 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
CDH13-206ENST00000562601 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
CDH13-206ENST00000562601 AKR1D1P51857 326 aa3.39□□□□□ -1.87
CDH13-206ENST00000562601 SMIM29Q86T20 159 aa3.39□□□□□ -1.87
CDH13-206ENST00000562601 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
CDH13-206ENST00000562601 Q9BRP9 147 aa3.39□□□□□ -1.87
CDH13-206ENST00000562601 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
CDH13-206ENST00000562601 Q6ZRX8 168 aa3.38□□□□□ -1.87
CDH13-206ENST00000562601 A6NDN8 102 aa3.37□□□□□ -1.87
CDH13-206ENST00000562601 IFITM1P13164 125 aa3.37□□□□□ -1.87
CDH13-206ENST00000562601 PRR4Q16378 134 aa3.37□□□□□ -1.87
CDH13-206ENST00000562601 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
CDH13-206ENST00000562601 ST20-AS1Q8NBB2 130 aa3.37□□□□□ -1.87
CDH13-206ENST00000562601 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
CDH13-206ENST00000562601 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
CDH13-206ENST00000562601 C6orf99Q4VX62 202 aa3.36□□□□□ -1.87
CDH13-206ENST00000562601 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
CDH13-206ENST00000562601 C14orf144Q96I85 54 aa3.36□□□□□ -1.87
CDH13-206ENST00000562601 RETNLBQ9BQ08 111 aa3.36□□□□□ -1.87
CDH13-206ENST00000562601 COX8AP10176 69 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms